Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1LGL
DownloadVisualize
BU of 1lgl by Molmil
Solution structure of HERG-specific scorpion toxin BeKm-1
Descriptor: BeKm-1 toxin
Authors:Korolokova, Y.V, Bocharov, E.V, Angelo, K, Maslennikov, I.V, Grinenko, O.V, Lipkin, A.V, Nosireva, E.D, Pluzhnikov, K.A, Olesen, S.-P, Arseniev, A.S, Grishin, E.V.
Deposit date:2002-04-16
Release date:2002-11-20
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:New binding site on common molecular scaffold provides HERG channel specificity of scorpion toxin BeKm-1.
J.Biol.Chem., 277, 2002
1BUJ
DownloadVisualize
BU of 1buj by Molmil
STRUCTURE OF BINASE IN SOLUTION
Descriptor: PROTEIN (BINASE)
Authors:Reibarkh, M.Y, Nolde, D.E, Vasilieva, L.I, Arseniev, A.S.
Deposit date:1998-09-04
Release date:1998-09-09
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Three-dimensional structure of binase in solution.
FEBS Lett., 431, 1998
5LQV
DownloadVisualize
BU of 5lqv by Molmil
Spatial structure of the lentil lipid transfer protein in complex with anionic lysolipid LPPG
Descriptor: 1-MYRISTOYL-2-HYDROXY-SN-GLYCERO-3-[PHOSPHO-RAC-(1-GLYCEROL)], Non-specific lipid-transfer protein 2
Authors:Mineev, K.S, Shenkarev, Z.O, Arseniev, A.S, Melnikova, D.N, Finkina, E.I, Ovchinnikova, T.V.
Deposit date:2016-08-17
Release date:2017-06-28
Last modified:2019-05-08
Method:SOLUTION NMR
Cite:Ligand Binding Properties of the Lentil Lipid Transfer Protein: Molecular Insight into the Possible Mechanism of Lipid Uptake.
Biochemistry, 56, 2017
5LAH
DownloadVisualize
BU of 5lah by Molmil
NMR structure of the sea anemone peptide tau-AnmTx Ueq 12-1 with an uncommon fold
Descriptor: tau-AnmTx Ueq 12-1
Authors:Mineev, K.S, Arseniev, A.S, Andreev, Y.A, Kozlov, S.A, Logashina, Y.A.
Deposit date:2016-06-14
Release date:2017-05-10
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:New Disulfide-Stabilized Fold Provides Sea Anemone Peptide to Exhibit Both Antimicrobial and TRPA1 Potentiating Properties
Toxins, 9, 2017
1NOR
DownloadVisualize
BU of 1nor by Molmil
TWO-DIMENSIONAL 1H-NMR STUDY OF THE SPATIAL STRUCTURE OF NEUROTOXIN II FROM NAJA OXIANA
Descriptor: NEUROTOXIN II
Authors:Golovanov, A.P, Utkin, Y.N, Lomize, A.L, Tsetlin, V.I, Arseniev, A.S.
Deposit date:1993-04-05
Release date:1993-10-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Two-dimensional 1H-NMR study of the spatial structure of neurotoxin II from Naja naja oxiana.
Eur.J.Biochem., 213, 1993
1RQU
DownloadVisualize
BU of 1rqu by Molmil
NMR structure of L7 dimer from E.coli
Descriptor: 50S ribosomal protein L7/L12
Authors:Bocharov, E.V, Sobol, A.G, Pavlov, K.V, Korzhnev, D.M, Jaravine, V.A, Gudkov, A.T, Arseniev, A.S.
Deposit date:2003-12-07
Release date:2004-03-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:From structure and dynamics of protein L7/L12 to molecular switching in ribosome.
J.Biol.Chem., 279, 2004
1RQS
DownloadVisualize
BU of 1rqs by Molmil
NMR structure of C-terminal domain of ribosomal protein L7 from E.coli
Descriptor: 50S ribosomal protein L7/L12
Authors:Bocharov, E.V, Sobol, A.G, Pavlov, K.V, Korzhnev, D.M, Jaravine, V.A, Gudkov, A.T, Arseniev, A.S.
Deposit date:2003-12-07
Release date:2004-03-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:From structure and dynamics of protein L7/L12 to molecular switching in ribosome.
J.Biol.Chem., 279, 2004
1RL5
DownloadVisualize
BU of 1rl5 by Molmil
NMR structure with tightly bound water molecule of cytotoxin I from Naja oxiana in aqueous solution (major form)
Descriptor: Cytotoxin 1
Authors:Dubinnyi, M.A, Pustovalova, Y.E, Dubovskii, P.V, Utkin, Y.N, Arseniev, A.S.
Deposit date:2003-11-25
Release date:2005-02-15
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Interaction of three-finger toxins with phospholipid membranes: comparison of S- and P-type cytotoxins.
Biochem.J., 387, 2005
1SCO
DownloadVisualize
BU of 1sco by Molmil
SCORPION TOXIN (OSK1 TOXIN) WITH HIGH AFFINITY FOR SMALL CONDUCTANCE CA(2+)-ACTIVATED K+ CHANNEL IN NEUROBLASTOMA-X-GLUOMA NG 108-15 HYBRID CELLS, NMR, 30 STRUCTURES
Descriptor: SCORPION TOXIN OSK1
Authors:Jaravine, V.A, Nolde, D.E, Pluzhnikov, K.A, Grishin, E.V, Arseniev, A.S.
Deposit date:1996-04-01
Release date:1997-01-27
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Three-dimensional structure of toxin OSK1 from Orthochirus scrobiculosus scorpion venom.
Biochemistry, 36, 1997
1RQT
DownloadVisualize
BU of 1rqt by Molmil
NMR structure of dimeric N-terminal domain of ribosomal protein L7 from E.coli
Descriptor: 50S ribosomal protein L7/L12
Authors:Bocharov, E.V, Sobol, A.G, Pavlov, K.V, Korzhnev, D.M, Jaravine, V.A, Gudkov, A.T, Arseniev, A.S.
Deposit date:2003-12-07
Release date:2004-03-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:From structure and dynamics of protein L7/L12 to molecular switching in ribosome.
J.Biol.Chem., 279, 2004
1RQV
DownloadVisualize
BU of 1rqv by Molmil
Spatial model of L7 dimer from E.coli with one hinge region in helical state
Descriptor: 50S ribosomal protein L7/L12
Authors:Bocharov, E.V, Sobol, A.G, Pavlov, K.V, Korzhnev, D.M, Jaravine, V.A, Gudkov, A.T, Arseniev, A.S.
Deposit date:2003-12-07
Release date:2004-03-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:From structure and dynamics of protein L7/L12 to molecular switching in ribosome
J.Biol.Chem., 279, 2004
8AR3
DownloadVisualize
BU of 8ar3 by Molmil
Solution structure of TLR9 transmembrane and cytoplasmic juxtamembrane regions
Descriptor: Toll-like receptor 9
Authors:Kornilov, F.D, Shabalkina, A.V, Goncharuk, M.V, Goncharuk, S.A, Arseniev, A.S, Mineev, K.S.
Deposit date:2022-08-15
Release date:2023-03-22
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:The architecture of transmembrane and cytoplasmic juxtamembrane regions of Toll-like receptors.
Nat Commun, 14, 2023
8AR0
DownloadVisualize
BU of 8ar0 by Molmil
Solution structure of TLR2 transmembrane and cytoplasmic juxtamembrane regions
Descriptor: Toll-like receptor 2
Authors:Kornilov, F.D, Shabalkina, A.V, Goncharuk, M.V, Goncharuk, S.A, Arseniev, A.S, Mineev, K.S.
Deposit date:2022-08-15
Release date:2023-03-22
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:The architecture of transmembrane and cytoplasmic juxtamembrane regions of Toll-like receptors.
Nat Commun, 14, 2023
8AR1
DownloadVisualize
BU of 8ar1 by Molmil
Solution structure of TLR3 transmembrane and cytoplasmic juxtamembrane regions
Descriptor: Toll-like receptor 3
Authors:Kornilov, F.D, Shabalkina, A.V, Goncharuk, M.V, Goncharuk, S.A, Arseniev, A.S, Mineev, K.S.
Deposit date:2022-08-15
Release date:2023-03-22
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:The architecture of transmembrane and cytoplasmic juxtamembrane regions of Toll-like receptors.
Nat Commun, 14, 2023
8AR2
DownloadVisualize
BU of 8ar2 by Molmil
Solution structure of TLR5 transmembrane and cytoplasmic juxtamembrane regions
Descriptor: Toll-like receptor 5
Authors:Shabalkina, A.V, Kornilov, F.D, Goncharuk, M.V, Goncharuk, S.A, Arseniev, A.S, Mineev, K.S.
Deposit date:2022-08-15
Release date:2023-03-22
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:The architecture of transmembrane and cytoplasmic juxtamembrane regions of Toll-like receptors.
Nat Commun, 14, 2023
2G9P
DownloadVisualize
BU of 2g9p by Molmil
NMR structure of a novel antimicrobial peptide, latarcin 2a, from spider (Lachesana tarabaevi) venom
Descriptor: antimicrobial peptide Latarcin 2a
Authors:Dubovskii, P.V, Volynsky, P.E, Polyansky, A.A, Chupin, V.V, Efremov, R.G, Arseniev, A.S.
Deposit date:2006-03-07
Release date:2006-09-12
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Spatial structure and activity mechanism of a novel spider antimicrobial peptide.
Biochemistry, 45, 2006
2J5D
DownloadVisualize
BU of 2j5d by Molmil
NMR structure of BNIP3 transmembrane domain in lipid bicelles
Descriptor: BCL2/ADENOVIRUS E1B 19 KDA PROTEIN-INTERACTING PROTEIN 3
Authors:Bocharov, E.V, Pustovalova, Y.E, Volynsky, P.E, Maslennikov, I.V, Goncharuk, M.V, Ermolyuk, Y.S, Arseniev, A.S.
Deposit date:2006-09-14
Release date:2007-04-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Unique dimeric structure of BNip3 transmembrane domain suggests membrane permeabilization as a cell death trigger.
J. Biol. Chem., 282, 2007
2FR9
DownloadVisualize
BU of 2fr9 by Molmil
NMR structure of the alpha-conotoxin GI (SER12)-benzoylphenylalanine derivative
Descriptor: Alpha-conotoxin GI
Authors:Pashkov, V.S, Maslennikov, I.V, Kasheverov, I.E, Zhmak, M.N, Utkin, Y.N, Tsetlin, V.I, Arseniev, A.S.
Deposit date:2006-01-19
Release date:2006-05-30
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Alpha-Conotoxin GI benzoylphenylalanine derivatives. (1)H-NMR structures and photoaffinity labeling of the Torpedo californica nicotinic acetylcholine receptor.
Febs J., 273, 2006
2FRB
DownloadVisualize
BU of 2frb by Molmil
NMR structure of the alpha-conotoxin GI (ASN4)-benzoylphenylalanine derivative
Descriptor: Alpha-conotoxin GIA
Authors:Pashkov, V.S, Maslennikov, I, Kasheverov, I.V, Zhmak, M.N, Utkin, Y.N, Tsetlin, V.I, Arseniev, A.S.
Deposit date:2006-01-19
Release date:2006-05-30
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Alpha-Conotoxin GI benzoylphenylalanine derivatives. (1)H-NMR structures and photoaffinity labeling of the Torpedo californica nicotinic acetylcholine receptor.
Febs J., 273, 2006
2JWM
DownloadVisualize
BU of 2jwm by Molmil
NMR spatial srtucture of ternary complex kalata B7/Mn2+/DPC micelle
Descriptor: Kalata-B7
Authors:Nadezhdin, K.D, Shenkarev, Z.O, Skjeldal, L, Arseniev, A.S.
Deposit date:2007-10-16
Release date:2008-03-11
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Divalent cation coordination and mode of membrane interaction in cyclotides: NMR spatial structure of ternary complex Kalata B7/Mn(2+)/DPC micelle
J.Inorg.Biochem., 102, 2008
2K1L
DownloadVisualize
BU of 2k1l by Molmil
NMR structures of dimeric transmembrane domain of the receptor tyrosine kinase EphA1 in lipid bicelles at pH 6.3
Descriptor: Ephrin type-A receptor 1
Authors:Mayzel, M.L, Bocharov, E.V, Arseniev, A.S, Goncharuk, M.V.
Deposit date:2008-03-07
Release date:2008-09-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Spatial Structure and pH-dependent Conformational Diversity of Dimeric Transmembrane Domain of the Receptor Tyrosine Kinase EphA1.
J.Biol.Chem., 283, 2008
2JWA
DownloadVisualize
BU of 2jwa by Molmil
ErbB2 transmembrane segment dimer spatial structure
Descriptor: Receptor tyrosine-protein kinase erbB-2
Authors:Mineev, K.S, Bocharov, E.V, Arseniev, A.S.
Deposit date:2007-10-09
Release date:2008-01-22
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Spatial Structure of the Dimeric Transmembrane Domain of the Growth Factor Receptor ErbB2 Presumably Corresponding to the Receptor Active State
J.Biol.Chem., 283, 2008
2K1K
DownloadVisualize
BU of 2k1k by Molmil
NMR structures of dimeric transmembrane domain of the receptor tyrosine kinase EphA1 in lipid bicelles at pH 4.3
Descriptor: Ephrin type-A receptor 1
Authors:Mayzel, M.L, Bocharov, E.V, Arseniev, A.S, Goncharuk, M.V.
Deposit date:2008-03-06
Release date:2008-09-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Spatial Structure and pH-dependent Conformational Diversity of Dimeric Transmembrane Domain of the Receptor Tyrosine Kinase EphA1
J.Biol.Chem., 283, 2008
2JNI
DownloadVisualize
BU of 2jni by Molmil
Spatial structure of antimicrobial peptide arenicin-2 in aqueous solution
Descriptor: Arenicin-2
Authors:Ovchinnikova, T.V, Shenkarev, Z.O, Nadezhdin, K.D, Balandin, S.V, Zhmak, M.N, Kudelina, I.A, Finkina, E.I, Kokryakov, V.N, Arseniev, A.S.
Deposit date:2007-01-25
Release date:2007-08-07
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Recombinant expression, synthesis, purification, and solution structure of arenicin
Biochem.Biophys.Res.Commun., 360, 2007
2K9Y
DownloadVisualize
BU of 2k9y by Molmil
EphA2 dimeric structure in the lipidic bicelle at pH 5.0
Descriptor: Ephrin type-A receptor 2
Authors:Mayzel, M.L, Bocharov, E.V, Volynsky, P.E, Arseniev, A.S.
Deposit date:2008-10-27
Release date:2009-08-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Left-Handed Dimer of EphA2 Transmembrane Domain: Helix Packing Diversity among Receptor Tyrosine Kinases
Biophys.J., 98, 2010

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon