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Crystal Structure of Threonine Synthase from Thermus Thermophilus HB8, Orthorhombic Crystal Form
Descriptor:	PYRIDOXAL-5'-PHOSPHATE, Threonine Synthase
Authors:	Omi, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2003-07-17
Release date:	2003-11-18
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (2.15 Å)
Cite:	Crystal Structures of Threonine Synthase from Thermus thermophilus HB8: Conformational change, substrate recognition, and mechanism. J.BIOL.CHEM., 278, 2003

1UIN

Crystal Structure of Threonine Synthase from Thermus Thermophilus HB8, Trigonal Crystal Form
Descriptor:	PYRIDOXAL-5'-PHOSPHATE, SULFATE ION, Threonine Synthase
Authors:	Omi, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2003-07-17
Release date:	2003-11-18
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (2.25 Å)
Cite:	Crystal Structures of Threonine Synthase from Thermus thermophilus HB8: Conformational change, substrate recognition, and mechanism. J.BIOL.CHEM., 278, 2003

1KZK

JE-2147-HIV Protease Complex
Descriptor:	(4R)-3-{(2S,3S)-2-hydroxy-3-[(3-hydroxy-2-methylbenzoyl)amino]-4-phenylbutanoyl}-5,5-dimethyl-N-(2-methylbenzyl)-1,3-thiazolidine-4-carboxamide, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:	Reiling, K.K, Endres, N.F, Dauber, D.S, Craik, C.S, Stroud, R.M.
Deposit date:	2002-02-06
Release date:	2002-04-03
Last modified:	2023-08-16
Method:	X-RAY DIFFRACTION (1.09 Å)
Cite:	Anisotropic Dynamics of the JE-2147-HIV Protease Complex: Drug Resistance and Thermodynamic Binding Mode Examined in a 1.09 A Structure Biochemistry, 41, 2002

1V2E

Crystal Structure of T.th HB8 Glutamine Aminotransferase complex with a-keto-g-methylthiobutyrate
Descriptor:	4-(METHYLSULFANYL)-2-OXOBUTANOIC ACID, Glutamine Aminotransferase, PYRIDOXAL-5'-PHOSPHATE
Authors:	Goto, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2003-10-15
Release date:	2004-07-06
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (2.6 Å)
Cite:	Crystal structures of glutamine:phenylpyruvate aminotransferase from Thermus thermophilus HB8: induced fit and substrate recognition J.BIOL.CHEM., 279, 2004

1V2F

Crystal Structure of T.th HB8 Glutamine Aminotransferase complex with 3-phenylpropionate
Descriptor:	Glutamine Aminotransferase, HYDROCINNAMIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:	Goto, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2003-10-15
Release date:	2004-07-06
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (2.35 Å)
Cite:	Crystal structures of glutamine:phenylpyruvate aminotransferase from Thermus thermophilus HB8: induced fit and substrate recognition J.BIOL.CHEM., 279, 2004

1VB3

Crystal Structure of Threonine Synthase from Escherichia coli
Descriptor:	2-OXO-5-PHOSPHONOPENTANOIC ACID, SULFATE ION, Threonine synthase
Authors:	Omi, R.
Deposit date:	2004-02-21
Release date:	2005-06-21
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	Crystal Structure of Threonine Synthase from Escherichia coli To be Published

1V2D

Crystal Structure of T.th HB8 Glutamine Aminotransferase
Descriptor:	Glutamine Aminotransferase, PYRIDOXAL-5'-PHOSPHATE
Authors:	Goto, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2003-10-15
Release date:	2004-07-06
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Crystal structures of glutamine:phenylpyruvate aminotransferase from Thermus thermophilus HB8: induced fit and substrate recognition J.BIOL.CHEM., 279, 2004

1V7C

Crystal structure of threonine synthase from thermus thermophilus hb8 in complex with a substrate analogue
Descriptor:	(2E)-2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]-5-PHOSPHONOPENT-2-ENOIC ACID, THREONINE SYNTHASE
Authors:	Omi, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2003-12-16
Release date:	2003-12-30
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Crystal structures of threonine synthase from Thermus thermophilus HB8: conformational change, substrate recognition, and mechanism. J.Biol.Chem., 278, 2003

1IYE

CRYSTAL STRUCTURE OF ESCHELICHIA COLI BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE
Descriptor:	BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE, N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)-L-glutamic acid
Authors:	Hirotsu, K, Goto, M.
Deposit date:	2002-08-07
Release date:	2003-05-06
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (1.82 Å)
Cite:	Crystal structures of branched-chain amino Acid aminotransferase complexed with glutamate and glutarate: true reaction intermediate and double substrate recognition of the enzyme. Biochemistry, 42, 2003

1IYD

CRYSTAL STRUCTURE OF ESCHELICHIA COLI BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE
Descriptor:	BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE, GLUTARIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:	Hirotsu, K, Goto, M.
Deposit date:	2002-08-07
Release date:	2003-05-06
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (2.15 Å)
Cite:	Crystal structures of branched-chain amino Acid aminotransferase complexed with glutamate and glutarate: true reaction intermediate and double substrate recognition of the enzyme. Biochemistry, 42, 2003

7WIS

Catalytic intermediate structure of N381A mutant of copper amine oxidase from Arthrobacter globiformis
Descriptor:	COPPER (II) ION, GLYCEROL, PHENYLACETALDEHYDE, ...
Authors:	Murakawa, T, Okajima, T.
Deposit date:	2022-01-04
Release date:	2022-11-16
Last modified:	2024-11-06
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Molecular mechanism of a large conformational change of the quinone cofactor in the semiquinone intermediate of bacterial copper amine oxidase. Chem Sci, 13, 2022

7WIR

Holo form of N381A mutant of copper amine oxidase from Arthrobacter globiformis
Descriptor:	COPPER (II) ION, GLYCEROL, Phenylethylamine oxidase
Authors:	Murakawa, T, Okajima, T.
Deposit date:	2022-01-04
Release date:	2022-11-16
Last modified:	2023-11-29
Method:	X-RAY DIFFRACTION (1.5 Å)
Cite:	Molecular mechanism of a large conformational change of the quinone cofactor in the semiquinone intermediate of bacterial copper amine oxidase. Chem Sci, 13, 2022

7DJI

Crystal structure of Lymnaea stagnalis Acetylcholine binding protein (AChBP) complexed with Paraherquamide A
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholine-binding protein, Paraherquamide A
Authors:	Ihara, M, Matsuda, K.
Deposit date:	2020-11-20
Release date:	2021-11-24
Last modified:	2024-10-23
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	Determinants of subtype-selectivity of the anthelmintic paraherquamide A on Caenorhabditis elegans nicotinic acetylcholine receptors. Mol.Pharmacol., 2023

7F8K

Room temperature structure of bacterial copper amine oxidase determined by serial femtosecond crystallography
Descriptor:	COPPER (II) ION, Phenylethylamine oxidase
Authors:	Murakawa, T, Okajima, T.
Deposit date:	2021-07-02
Release date:	2021-09-08
Last modified:	2021-10-13
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	Microcrystal preparation for serial femtosecond X-ray crystallography of bacterial copper amine oxidase Acta Crystallogr.,Sect.F, 77, 2021

1J1E

Crystal structure of the 52kDa domain of human cardiac troponin in the Ca2+ saturated form
Descriptor:	CALCIUM ION, Troponin C, Troponin I, ...
Authors:	Takeda, S, Yamashita, A, Maeda, K, Maeda, Y.
Deposit date:	2002-12-03
Release date:	2003-07-15
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (3.3 Å)
Cite:	Structure of the core domain of human cardiac troponin in the Ca2+-saturated form Nature, 424, 2003

1J1D

Crystal structure of the 46kDa domain of human cardiac troponin in the Ca2+ saturated form
Descriptor:	CALCIUM ION, Troponin C, Troponin I, ...
Authors:	Takeda, S, Yamashita, A, Maeda, K, Maeda, Y.
Deposit date:	2002-12-03
Release date:	2003-07-15
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (2.61 Å)
Cite:	Structure of the core domain of human cardiac troponin in the Ca2+-saturated form Nature, 424, 2003

3A9Z

Crystal structure of ras selenocysteine lyase in complex with selenopropionate
Descriptor:	3-selanylpropanoic acid, PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:	Omi, R, Hirotsu, K.
Deposit date:	2009-11-09
Release date:	2010-03-16
Last modified:	2025-03-26
Method:	X-RAY DIFFRACTION (1.55 Å)
Cite:	Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase. J.Biol.Chem., 285, 2010

3A2B

Crystal Structure of Serine Palmitoyltransferase from Sphingobacterium multivorum with substrate L-serine
Descriptor:	PYRIDOXAL-5'-PHOSPHATE, SERINE, Serine palmitoyltransferase
Authors:	Okamoto, A, Hoseki, J.
Deposit date:	2009-05-09
Release date:	2009-07-14
Last modified:	2023-11-01
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Structural Insights into the Enzymatic Mechanism of Serine Palmitoyltransferase from Sphingobacterium multivorum J.Biochem., 146, 2009

2Z5E

Crystal Structure of Proteasome Assembling Chaperone 3
Descriptor:	Proteasome Assembling Chaperone 3
Authors:	Okamoto, K, Kurimoto, E, Sakata, E, Suzuki, A, Yamane, T, Hirano, Y, Murata, S, Tanaka, K, Kato, K.
Deposit date:	2007-07-06
Release date:	2008-02-19
Last modified:	2024-03-13
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Crystal structure of a chaperone complex that contributes to the assembly of yeast 20S proteasomes Nat.Struct.Mol.Biol., 15, 2008

3A9X

Crystal structure of rat selenocysteine lyase
Descriptor:	PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, Selenocysteine lyase
Authors:	Omi, R, Hirotsu, K.
Deposit date:	2009-11-08
Release date:	2010-03-16
Last modified:	2025-03-26
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase. J.Biol.Chem., 285, 2010

3A9Y

Crystal structure of rat selenocysteine lyase in complex with L-cysteine
Descriptor:	CYSTEINE, GLYCEROL, PHOSPHATE ION, ...
Authors:	Omi, R, Hirotsu, K.
Deposit date:	2009-11-09
Release date:	2010-03-16
Last modified:	2025-03-26
Method:	X-RAY DIFFRACTION (1.85 Å)
Cite:	Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase. J.Biol.Chem., 285, 2010

2ZL8

Crystal structure of copper amine oxidase from Arthrobacter globiformis: Substrate Schiff-base intermediate formed with ethylamine
Descriptor:	COPPER (II) ION, Phenylethylamine oxidase
Authors:	Murakawa, T, Okajima, T.
Deposit date:	2008-04-03
Release date:	2008-08-05
Last modified:	2024-11-13
Method:	X-RAY DIFFRACTION (1.73 Å)
Cite:	Further insight into the mechanism of stereoselective proton abstraction by bacterial copper amine oxidase Biochemistry, 47, 2008

2DW1

Crystal structure of VAP2 from Crotalus atrox venom (Form 2-2 crystal)
Descriptor:	3-(N-HYDROXYCARBOXAMIDO)-2-ISOBUTYLPROPANOYL-TRP-METHYLAMIDE, CALCIUM ION, Catrocollastatin, ...
Authors:	Takeda, S, Igarashi, T, Araki, S.
Deposit date:	2006-08-02
Release date:	2007-07-10
Last modified:	2024-10-23
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Crystal structures of catrocollastatin/VAP2B reveal a dynamic, modular architecture of ADAM/adamalysin/reprolysin family proteins Febs Lett., 581, 2007

2AY1

AROMATIC AMINO ACID AMINOTRANSFERASE WITH 4-AMINOHYDROCINNAMIC ACID
Descriptor:	4-AMINOHYDROCINNAMIC ACID, AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:	Okamoto, A, Hirotsu, K, Kagamiyama, H.
Deposit date:	1998-08-06
Release date:	1999-02-02
Last modified:	2023-08-09
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity. Biochemistry, 38, 1999

2AY6

AROMATIC AMINO ACID AMINOTRANSFERASE WITH 3-INDOLEBUTYRIC ACID
Descriptor:	3-INDOLEBUTYRIC ACID, AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:	Okamoto, A, Hirotsu, K, Kagamiyama, H.
Deposit date:	1998-08-06
Release date:	1999-02-02
Last modified:	2023-08-09
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity. Biochemistry, 38, 1999

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