Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5ZHA
DownloadVisualize
BU of 5zha by Molmil
Structure of Y68F mutant Mn-Bound periplasmic metal binding protein from candidatus liberibacter asiaticus
Descriptor: ACETATE ION, GLYCEROL, MANGANESE (II) ION, ...
Authors:Saini, G, Sharma, N, Dalal, V, Kumar, P, Sharma, A.K.
Deposit date:2018-03-12
Release date:2018-10-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:The analysis of subtle internal communications through mutation studies in periplasmic metal uptake protein CLas-ZnuA2
J. Struct. Biol., 204, 2018
4ONV
DownloadVisualize
BU of 4onv by Molmil
Crystal structure of YagE, a KDG aldolase protein in complex with 2-Keto-3-deoxy gluconate
Descriptor: 1,2-ETHANEDIOL, 2-KETO-3-DEOXYGLUCONATE, GLYCEROL, ...
Authors:Manoj Kumar, P, Bhaskar, V, Manicka, S, Krishnaswamy, S.
Deposit date:2014-01-29
Release date:2015-01-14
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Crystal structure of YagE, a KDG aldolase protein in complex with 2-Keto-3-deoxy gluconate
To be Published
5Z2K
DownloadVisualize
BU of 5z2k by Molmil
Structure of S38A mutant Mn-bound periplasmic metal binding protein from candidatus liberibacter asiaticus
Descriptor: ACETATE ION, GLYCEROL, MANGANESE (II) ION, ...
Authors:Saini, G, Sharma, N, Dalal, V, Kumar, P, Sharma, A.K.
Deposit date:2018-01-02
Release date:2018-10-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The analysis of subtle internal communications through mutation studies in periplasmic metal uptake protein CLas-ZnuA2
J. Struct. Biol., 204, 2018
2Y93
DownloadVisualize
BU of 2y93 by Molmil
Crystal Structure of cis-Biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)from Pandoraea pnomenusa strain B-356.
Descriptor: CIS-2,3-DIHYDROBIPHENYL-2,3-DIOL DEHYDROGENASE
Authors:Dhindwal, S, Patil, D.N, Kumar, P.
Deposit date:2011-02-11
Release date:2011-08-31
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Biochemical Studies and Ligand-Bound Structures of Biphenyl Dehydrogenase from Pandoraea Pnomenusa Strain B-356 Reveal a Basis for Broad Specificity of the Enzyme.
J.Biol.Chem., 286, 2011
2Y99
DownloadVisualize
BU of 2y99 by Molmil
Crystal Structure of cis-Biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)from Pandoraea pnomenusa strain B-356 complex with co-enzyme NAD
Descriptor: CIS-2,3-DIHYDROBIPHENYL-2,3-DIOL DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Dhindwal, S, Patil, D.N, Kumar, P.
Deposit date:2011-02-12
Release date:2011-08-31
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Biochemical Studies and Ligand-Bound Structures of Biphenyl Dehydrogenase from Pandoraea Pnomenusa Strain B-356 Reveal a Basis for Broad Specificity of the Enzyme.
J.Biol.Chem., 286, 2011
5D79
DownloadVisualize
BU of 5d79 by Molmil
Structure of BBE-like #28 from Arabidopsis thaliana
Descriptor: Berberine bridge enzyme-like protein, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Daniel, B, Kumar, P, Gruber, K.
Deposit date:2015-08-13
Release date:2016-06-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.849 Å)
Cite:Structure of a Berberine Bridge Enzyme-Like Enzyme with an Active Site Specific to the Plant Family Brassicaceae.
Plos One, 11, 2016
1I6Q
DownloadVisualize
BU of 1i6q by Molmil
Formation of a protein intermediate and its trapping by the simultaneous crystallization process: Crystal structure of an iron-saturated intermediate in the FE3+ binding pathway of camel lactoferrin at 2.7 resolution
Descriptor: CARBONATE ION, FE (III) ION, LACTOFERRIN
Authors:Khan, J.A, Kumar, P, Srinivasan, A, Singh, T.P.
Deposit date:2001-03-03
Release date:2001-11-07
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Protein intermediate trapped by the simultaneous crystallization process. Crystal structure of an iron-saturated intermediate in the Fe3+ binding pathway of camel lactoferrin at 2.7 a resolution.
J.Biol.Chem., 276, 2001
1LJX
DownloadVisualize
BU of 1ljx by Molmil
THE STRUCTURE OF D(TPGPCPGPCPA)2 AT 293K: COMPARISON OF THE EFFECT OF SEQUENCE AND TEMPERATURE
Descriptor: 5'-D(*TP*GP*CP*GP*CP*A)-3', MAGNESIUM ION
Authors:Thiyagarajan, S, Satheesh Kumar, P, Rajan, S.S, Gautham, N.
Deposit date:2002-04-23
Release date:2002-05-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structure of d(TGCGCA)2 at 293 K: comparison of the effects of sequence and temperature.
Acta Crystallogr.,Sect.D, 58, 2002
7FHR
DownloadVisualize
BU of 7fhr by Molmil
Crystal Structure of a Rieske Oxygenase from Cupriavidus metallidurans
Descriptor: 1,2-ETHANEDIOL, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Mahto, J.K, Dhankhar, P, Kumar, P.
Deposit date:2021-07-30
Release date:2021-12-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Molecular insights into substrate recognition and catalysis by phthalate dioxygenase from Comamonas testosteroni.
J.Biol.Chem., 297, 2021
4Z9Q
DownloadVisualize
BU of 4z9q by Molmil
Crystal structure of OXA-58 with disordered active site
Descriptor: Beta-lactamase OXA-58
Authors:Pratap, S, Gill, P.K, Golemi-Kotra, D, Kumar, P.
Deposit date:2015-04-11
Release date:2016-04-13
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Crystal structure of OXA-58 with disordered active site
To Be Published
4ZTB
DownloadVisualize
BU of 4ztb by Molmil
Crystal structure of nsP2 protease from Chikungunya virus in P212121 space group at 2.59 A (4molecules/ASU).
Descriptor: GLYCEROL, Protease nsP2
Authors:Narwal, M, Pratap, S, Singh, H, Kumar, P, Tomar, S.
Deposit date:2015-05-14
Release date:2016-06-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Crystal structure of chikungunya virus nsP2 cysteine protease reveals a putative flexible loop blocking its active site.
Int.J.Biol.Macromol., 116, 2018
5AEW
DownloadVisualize
BU of 5aew by Molmil
Crystal structure of II9 variant of Biphenyl dioxygenase from Burkholderia xenovorans LB400 in complex with biphenyl
Descriptor: BIPHENYL, BIPHENYL DIOXYGENASE SUBUNIT ALPHA, BIPHENYL DIOXYGENASE SUBUNIT BETA, ...
Authors:Dhindwal, S, Gomez-Gil, L, Sylvestre, M, Eltis, L.D, Bolin, J.T, Kumar, P.
Deposit date:2015-01-10
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structural Basis of the Enhanced Pollutant-Degrading Capabilities of an Engineered Biphenyl Dioxygenase.
J.Bacteriol., 198, 2016
3MGZ
DownloadVisualize
BU of 3mgz by Molmil
Crystal structure of DHBPS domain of bi-functional DHBPS/GTP cyclohydrolase II from Mycobacterium tuberculosis at pH 4.0
Descriptor: 3,4-dihydroxy-2-butanone 4-phosphate synthase, SULFATE ION
Authors:Singh, M, Kumar, P, Karthikeyan, S.
Deposit date:2010-04-07
Release date:2011-02-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structural basis for pH dependent monomer-dimer transition of 3,4-dihydroxy 2-butanone-4-phosphate synthase domain from Mycobacterium tuberculosis
J.Struct.Biol., 174, 2011
4C44
DownloadVisualize
BU of 4c44 by Molmil
Crystal Structure of Truncated Plant Hemoglobin from Arabidopsis thaliana
Descriptor: 2-ON-2 HEMOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION
Authors:Mukhi, N, Dhindwal, S, Kumar, P, Kaur, J, Kundu, S.
Deposit date:2013-08-30
Release date:2014-09-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:X-Ray Crystallographic Structural Characteristics of Truncated Hemoglobin from Arabidopsis Thaliana
To be Published
6DGC
DownloadVisualize
BU of 6dgc by Molmil
Crystal structure of the C-terminal catalytic domain of ISC1926 TnpA, an IS607-like serine recombinase
Descriptor: ISC1926 TnpA C-terminal catalytic domain
Authors:Hancock, S.P, Kumar, P, Cascio, D, Johnson, R.C.
Deposit date:2018-05-17
Release date:2018-07-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Multiple serine transposase dimers assemble the transposon-end synaptic complex during IS607-family transposition.
Elife, 7, 2018
7CFE
DownloadVisualize
BU of 7cfe by Molmil
Crystal structure of RsmG methyltransferase of M. tuberculosis
Descriptor: ISOPROPYL ALCOHOL, PHOSPHATE ION, Ribosomal RNA small subunit methyltransferase G, ...
Authors:Bijpuria, S, Maurya, A, Kumar, P, Sharma, R, Taneja, B.
Deposit date:2020-06-25
Release date:2021-06-30
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal structure of RsmG methyltransferase of M. tuberculosis
To Be Published
7DOB
DownloadVisualize
BU of 7dob by Molmil
Crystal structure of Catabolite repressor activator (Apo)
Descriptor: 1,2-ETHANEDIOL, Catabolite repressor/activator, MAGNESIUM ION, ...
Authors:Neetu, N, Katiki, M, Kumar, P.
Deposit date:2020-12-13
Release date:2021-12-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of Catabolite repressor activator (Apo)
To Be Published
7DOA
DownloadVisualize
BU of 7doa by Molmil
Crystal structure of Catabolite repressor acivator from E. coli in complex with HEPES
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Catabolite repressor/activator, GLYCEROL
Authors:Neetu, N, Katiki, M, Kumar, P.
Deposit date:2020-12-13
Release date:2021-12-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of Catabolite repressor acivator from E. coli in complex with HEPES
To Be Published
7FJL
DownloadVisualize
BU of 7fjl by Molmil
Crystal Structure of phthalate dioxygenase from Comamonas testosteroni KF1
Descriptor: 1,2-ETHANEDIOL, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Mahto, J.K, Kumar, P.
Deposit date:2021-08-04
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Molecular insights into substrate recognition and catalysis by phthalate dioxygenase from Comamonas testosteroni.
J.Biol.Chem., 297, 2021
2G88
DownloadVisualize
BU of 2g88 by Molmil
MSRECA-dATP COMPLEX
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CITRIC ACID, MAGNESIUM ION, ...
Authors:Krishna, R, Manjunath, G.P, Kumar, P, Surolia, A, Chandra, N.R, Muniyappa, K, Vijayan, M.
Deposit date:2006-03-02
Release date:2006-05-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystallographic identification of an ordered C-terminal domain and a second nucleotide-binding site in RecA: new insights into allostery.
Nucleic Acids Res., 34, 2006
2ZSA
DownloadVisualize
BU of 2zsa by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with ADP and Phosphopantothenate
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, GLYCEROL, ...
Authors:Chetnani, B, Das, S, Kumar, P, Surolia, A, Vijayan, M.
Deposit date:2008-09-04
Release date:2009-07-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mycobacterium tuberculosis pantothenate kinase: possible changes in location of ligands during enzyme action
Acta Crystallogr.,Sect.D, 65, 2009
2ZSB
DownloadVisualize
BU of 2zsb by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with ADP, obtained through soaking of native enzyme crystals with the ligand
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, Pantothenate kinase
Authors:Chetnani, B, Das, S, Kumar, P, Surolia, A, Vijayan, M.
Deposit date:2008-09-04
Release date:2009-07-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Mycobacterium tuberculosis pantothenate kinase: possible changes in location of ligands during enzyme action
Acta Crystallogr.,Sect.D, 65, 2009
2ZS9
DownloadVisualize
BU of 2zs9 by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with ADP and Pantothenate
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, PANTOTHENOIC ACID, ...
Authors:Chetnani, B, Das, S, Kumar, P, Surolia, A, Vijayan, M.
Deposit date:2008-09-04
Release date:2009-07-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Mycobacterium tuberculosis pantothenate kinase: possible changes in location of ligands during enzyme action
Acta Crystallogr.,Sect.D, 65, 2009
2ZS8
DownloadVisualize
BU of 2zs8 by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) co-crystallized with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, Pantothenate kinase
Authors:Chetnani, B, Das, S, Kumar, P, Surolia, A, Vijayan, M.
Deposit date:2008-09-03
Release date:2009-07-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mycobacterium tuberculosis pantothenate kinase: possible changes in location of ligands during enzyme action
Acta Crystallogr.,Sect.D, 65, 2009
3AF0
DownloadVisualize
BU of 3af0 by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with GDP and Pantothenate
Descriptor: CHLORIDE ION, GLYCEROL, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Chetnani, B, Kumar, P, Surolia, A, Vijayan, M.
Deposit date:2010-02-19
Release date:2010-05-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:M. tuberculosis pantothenate kinase: dual substrate specificity and unusual changes in ligand locations
J.Mol.Biol., 400, 2010

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon