4AGJ

Crystal structure of the capsid protein (110-267) from Aura virus in complex with dioxane

Summary for 4AGJ

Related4AGK
DescriptorCAPSID PROTEIN, 1,4-DIETHYLENE DIOXIDE (3 entities in total)
Functional Keywordshydrolase, viral protein, dioxane
Biological sourceAURA VIRUS
Cellular locationCapsid protein: Virion . p62: Virion membrane ; Single- pass type I membrane protein . E2 envelope glycoprotein: Virion membrane ; Single-pass type I membrane protein . E1 envelope glycoprotein: Virion membrane ; Single-pass type I membrane protein . 6K protein: Host cell membrane ; Multi-pass membrane protein  Q86925
Total number of polymer chains1
Total molecular weight17097.34
Authors
Aggarwal, M.,Kumar, P.,Tomar, S. (deposition date: 2012-01-30, release date: 2012-12-26, Last modification date: 2015-03-25)
Primary citation
Aggarwal, M.,Tapas, S.,Preeti,Siwach, A.,Kumar, P.,Kuhn, R.J.,Tomar, S.
Crystal Structure of Aura Virus Capsid Protease and its Complex with Dioxane: New Insights Into Capsid-Glycoprotein Molecular Contacts.
Plos One, 7:51288-, 2012
PubMed: 23251484 (PDB entries with the same primary citation)
DOI: 10.1371/JOURNAL.PONE.0051288
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.98 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.26880.7%11.0%2.6%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

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