Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2MKG
DownloadVisualize
BU of 2mkg by Molmil
Solution structure of the tandem UIMs of RAP80
Descriptor: BRCA1-A complex subunit RAP80
Authors:Anamika, Markin, C.J, Rout, M.K, Spyracopoulos, L.
Deposit date:2014-02-06
Release date:2014-03-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Molecular Basis for Impaired DNA Damage Response Function Associated with the RAP80 Delta E81 Defect.
J.Biol.Chem., 289, 2014
2MBD
DownloadVisualize
BU of 2mbd by Molmil
Lasiocepsin
Descriptor: lasiocepsin
Authors:Monincova, L, Budesinsky, M, Cujova, S, Cerovsky, V, Veverka, V.
Deposit date:2013-07-30
Release date:2014-01-15
Last modified:2014-01-29
Method:SOLUTION NMR
Cite:Structural basis for antimicrobial activity of lasiocepsin.
Chembiochem, 15, 2014
2MJV
DownloadVisualize
BU of 2mjv by Molmil
Solution structures of second bromodomain of Brd4 with di-acetylated Twist peptide
Descriptor: Bromodomain-containing protein 4, Twist-related protein 1
Authors:Zeng, L, Zhou, M.
Deposit date:2014-01-16
Release date:2014-03-19
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Disrupting the Interaction of BRD4 with Diacetylated Twist Suppresses Tumorigenesis in Basal-like Breast Cancer.
Cancer Cell, 25, 2014
2MKI
DownloadVisualize
BU of 2mki by Molmil
Solution structure of tandem RRM domains of cytoplasmic polyadenylation element binding protein 4 (CPEB4) in complex with RNA
Descriptor: Cytoplasmic polyadenylation element-binding protein 4, RNA (5'-R(*CP*UP*UP*UP*A)-3')
Authors:Afroz, T, Skrisovska, L, Belloc, E, Boixet, J.G, Mendez, R, Allain, F.H.-T.
Deposit date:2014-02-07
Release date:2014-07-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A fly trap mechanism provides sequence-specific RNA recognition by CPEB proteins
Genes Dev., 28, 2014
2MKH
DownloadVisualize
BU of 2mkh by Molmil
Solution structure of tandem RRM domains of cytoplasmic polyadenylation element binding protein 1 (CPEB1) in free state
Descriptor: Cytoplasmic polyadenylation element-binding protein 1
Authors:Afroz, T, Skrisovska, L, Belloc, E, Boixet, J.G, Mendez, R, Allain, F.H.-T.
Deposit date:2014-02-07
Release date:2014-07-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A fly trap mechanism provides sequence-specific RNA recognition by CPEB proteins
Genes Dev., 28, 2014
2MMZ
DownloadVisualize
BU of 2mmz by Molmil
Solution structure of the apo form of human glutaredoxin 5
Descriptor: Glutaredoxin-related protein 5, mitochondrial
Authors:Banci, L, Brancaccio, D, Ciofi-Baffoni, S, Del Conte, R, Gadepalli, R, Mikolajczyk, M, Neri, S, Piccioli, M, Winkelmann, J.
Deposit date:2014-03-25
Release date:2014-04-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:[2Fe-2S] cluster transfer in iron-sulfur protein biogenesis.
Proc.Natl.Acad.Sci.USA, 111, 2014
4UFZ
DownloadVisualize
BU of 4ufz by Molmil
Synthesis of Novel NAD Dependant DNA Ligase Inhibitors via Negishi Cross-Coupling: Development of SAR and Resistance Studies
Descriptor: 1-(2,4-dimethylbenzyl)-6-oxo-1,6-dihydropyridine-3-carboxamide, 5,7-bis(azanyl)-2-tert-butyl-4-(1,3-thiazol-2-yl)pyrido[2,3-d]pyrimidine-6-carbonitrile, DNA LIGASE
Authors:Murphy-Benenato, K.E, Boriack-Sjodin, P.A, Martinez-Botella, G, Carcanague, D, Gingipali, L, Gowravaram, M, Harang, J, Hale, M, Ioannidis, G, Jahic, H, Johnstone, M, Kutschke, A, Laganas, V.A, Loch, J, Oguto, H, Patel, S.J.
Deposit date:2015-03-20
Release date:2015-10-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Negishi Cross-Coupling Enabled Synthesis of Novel Nad(+)-Dependent DNA Ligase Inhibitors and Sar Development.
Bioorg.Med.Chem.Lett., 25, 2015
2MJD
DownloadVisualize
BU of 2mjd by Molmil
Oxidized Yeast Adrenodoxin Homolog 1
Descriptor: Adrenodoxin homolog, mitochondrial, FE2/S2 (INORGANIC) CLUSTER
Authors:Gallo, A, Banci, L.
Deposit date:2014-01-07
Release date:2014-11-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Functional reconstitution of mitochondrial Fe/S cluster synthesis on Isu1 reveals the involvement of ferredoxin.
Nat Commun, 5, 2014
4UOE
DownloadVisualize
BU of 4uoe by Molmil
Crystal Structure of Plasmodium Falciparum Spermidine Synthase in Complex with 5'-Deoxy-5'-Methylioadenosine and 4-Aminomethylaniline
Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, 4-(aminomethyl)aniline, 5'-DEOXY-5'-METHYLTHIOADENOSINE, ...
Authors:Sprenger, J, Halander, J.C, Svensson, B, Al-Karadaghi, S, Person, L.
Deposit date:2014-06-03
Release date:2014-10-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Three-Dimensional Structures of Plasmodium Falciparum Spermidine Synthase with Bound Inhibitors Suggest New Strategies for Drug Design.
Acta Crystallogr.,Sect.D, 71, 2015
2M1D
DownloadVisualize
BU of 2m1d by Molmil
Biosynthetic engineered B28K-B29P human insulin monomer structure in in water/acetonitrile solutions.
Descriptor: Insulin
Authors:Bocian, W, Kozerski, L.
Deposit date:2012-11-26
Release date:2013-02-27
Last modified:2013-05-22
Method:SOLUTION NMR
Cite:Biosynthetic engineered B28(K)-B29(P) human insulin monomer structure in water and in water/acetonitrile solutions.
J.Biomol.Nmr, 55, 2013
2MMQ
DownloadVisualize
BU of 2mmq by Molmil
Solution structure of AGT FAPY Modified duplex
Descriptor: DNA_(5'-D(*CP*TP*AP*AP*(FAG)P*TP*TP*TP*CP*A)-3'), DNA_(5'-D(*TP*GP*AP*AP*AP*CP*TP*TP*AP*G)-3')
Authors:Li, L, Stone, M.
Deposit date:2014-03-17
Release date:2015-02-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct.
Chem.Res.Toxicol., 28, 2015
2MBV
DownloadVisualize
BU of 2mbv by Molmil
LMO4-LIM2 in complex with DEAF1 (404-418)
Descriptor: Fusion protein of LIM domain transcription factor LMO4 (77-147) and DEAF1 (404-418), ZINC ION
Authors:Joseph, S, Matthews, J.M, Kwan, A.H.-Y, Mackay, J.P, Cubeddu, L, Foo, P.
Deposit date:2013-08-06
Release date:2014-08-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural characterisation of LIM-only protein 4 (LMO4) in complex with Deformed Epidermal Autoregulatory Factor-1 (DEAF1)
To be Published
2MGY
DownloadVisualize
BU of 2mgy by Molmil
Solution structure of the mitochondrial translocator protein (TSPO) in complex with its high-affinity ligand PK11195
Descriptor: N-[(2R)-butan-2-yl]-1-(2-chlorophenyl)-N-methylisoquinoline-3-carboxamide, Translocator protein
Authors:Jaremko, M, Jaremko, L, Giller, K, Becker, S, Zweckstetter, M.
Deposit date:2013-11-11
Release date:2014-04-02
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of the mitochondrial translocator protein in complex with a diagnostic ligand.
Science, 343, 2014
2M89
DownloadVisualize
BU of 2m89 by Molmil
Solution structure of the Aha1 dimer from Colwellia psychrerythraea
Descriptor: Aha1 domain protein
Authors:Rossi, P, Sgourakis, N.G, Shi, L, Liu, G, Barbieri, C.M, Lee, H, Grant, T.D, Luft, J.R, Xiao, R, Acton, T.B, Montelione, G.T, Snell, E.H, Baker, D, Lange, O.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-05-09
Release date:2013-09-04
Last modified:2024-05-01
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:A hybrid NMR/SAXS-based approach for discriminating oligomeric protein interfaces using Rosetta.
Proteins, 83, 2015
4UPV
DownloadVisualize
BU of 4upv by Molmil
Low X-ray dose structure of a Ni-A Ni-Sox mixture of the D. fructosovorans NiFe-hydrogenase L122A mutant
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, CHLORIDE ION, FE3-S4 CLUSTER, ...
Authors:Volbeda, A, Martin, L, Barbier, E, Gutierrez-Sanz, O, DeLacey, A.L, Liebgott, P.P, Dementin, S, Rousset, M, Fontecilla-Camps, J.C.
Deposit date:2014-06-18
Release date:2014-10-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Crystallographic studies of [NiFe]-hydrogenase mutants: towards consensus structures for the elusive unready oxidized states.
J. Biol. Inorg. Chem., 20, 2015
4UG1
DownloadVisualize
BU of 4ug1 by Molmil
GpsB N-terminal domain
Descriptor: CELL CYCLE PROTEIN GPSB, IMIDAZOLE, NICKEL (II) ION
Authors:Rismondo, J, Cleverley, R.M, Lane, H.V, Grohennig, S, Steglich, A, Muller, L, Krishna Mannala, G, Hain, T, Lewis, R.J, Halbedel, S.
Deposit date:2015-03-20
Release date:2015-11-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of the Bacterial Cell Division Determinant Gpsb and its Interaction with Penicillin Binding Proteins.
Mol.Microbiol., 99, 2016
2MCI
DownloadVisualize
BU of 2mci by Molmil
NMR structure of DNA duplex
Descriptor: DNA_(5'-D(*CP*AP*GP*CP*CP*GP*AP*C)-3'), DNA_(5'-D(*GP*TP*CP*GP*GP*CP*TP*G)-3')
Authors:Brzezinska, J, Gdaniec, Z, Popenda, L, Markiewicz, W.T.
Deposit date:2013-08-20
Release date:2014-01-22
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Polyaminooligonucleotide: NMR structure of duplex DNA containing a nucleoside with spermine residue, N-[4,9,13-triazatridecan-1-yl]-2'-deoxycytidine.
Biochim.Biophys.Acta, 1840, 2014
2MHO
DownloadVisualize
BU of 2mho by Molmil
Solution State Structure PSD-95 PDZ1 with 5HT2C Receptor peptide
Descriptor: Disks large homolog 4, peptide from 5-hydroxytryptamine receptor 2C
Authors:Dorr, L.A, Phelan, M.M, Lian, L.
Deposit date:2013-11-29
Release date:2014-03-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Interactions of the 5-Hydroxytryptamine Receptor 2a and 2c Variants with the PSD-MAGUK proteins, PSD-95 and SAP997
To be Published
2MKE
DownloadVisualize
BU of 2mke by Molmil
Solution structure of CPEB1 ZZ domain in the free state
Descriptor: Cytoplasmic polyadenylation element-binding protein 1, ZINC ION
Authors:Afroz, T, Skrisovska, L, Belloc, E, Boixet, J.G, Mendez, R, Allain, F.H.-T.
Deposit date:2014-02-06
Release date:2014-07-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A fly trap mechanism provides sequence-specific RNA recognition by CPEB proteins
Genes Dev., 28, 2014
2LXY
DownloadVisualize
BU of 2lxy by Molmil
NMR structure of 2-MERCAPTOPHENOL-ALPHA3C
Descriptor: 2-MERCAPTOPHENOL, 2-mercaptophenol-alpha3C
Authors:Tommos, C, Valentine, K.G, Martinez-Rivera, M.C, Liang, L, Moorman, V.R.
Deposit date:2012-09-06
Release date:2013-02-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Reversible phenol oxidation and reduction in the structurally well-defined 2-Mercaptophenol-alpha(3)C protein.
Biochemistry, 52, 2013
2MKR
DownloadVisualize
BU of 2mkr by Molmil
Structural Characterization of a Complex Between the Acidic Transactivation Domain of EBNA2 and the Tfb1/p62 subunit of TFIIH.
Descriptor: Epstein-Barr nuclear antigen 2, RNA polymerase II transcription factor B subunit 1
Authors:Chabot, P.R, Raiola, L, Lussier-Price, M, Morse, T, Arseneault, G, Archambault, J, Omichinski, J.
Deposit date:2014-02-12
Release date:2014-03-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and Functional Characterization of a Complex between the Acidic Transactivation Domain of EBNA2 and the Tfb1/p62 Subunit of TFIIH.
Plos Pathog., 10, 2014
2MFZ
DownloadVisualize
BU of 2mfz by Molmil
NMR structure of C-terminal domain from A. ventricosus minor ampullate spidroin (MiSp)
Descriptor: Minor ampullate spidroin
Authors:Otikovs, M, Jaudzems, K, Andersson, M, Chen, G, Landreh, M, Nordling, K, Kronqvist, N, Westermark, P, Jornvall, H, Knight, S, Ridderstrale, Y, Holm, L, Meng, Q, Chesler, M, Johansson, J, Rising, A.
Deposit date:2013-10-24
Release date:2014-08-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Carbonic Anhydrase Generates CO2 and H+ That Drive Spider Silk Formation Via Opposite Effects on the Terminal Domains
Plos Biol., 12, 2014
2MKK
DownloadVisualize
BU of 2mkk by Molmil
Structural model of tandem RRM domains of cytoplasmic polyadenylation element binding protein 1 (CPEB1) in complex with RNA
Descriptor: Cytoplasmic polyadenylation element-binding protein 1, RNA (5'-R(*UP*UP*UP*UP*A)-3')
Authors:Afroz, T, Skrisovska, L, Belloc, E, Boixet, J.G, Mendez, R, Allain, F.H.-T.
Deposit date:2014-02-07
Release date:2014-07-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A fly trap mechanism provides sequence-specific RNA recognition by CPEB proteins
Genes Dev., 28, 2014
4UPE
DownloadVisualize
BU of 4upe by Molmil
Structure of the unready Ni-A state of the S499C mutant of D. fructosovorans NiFe-hydrogenase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, CARBONMONOXIDE-(DICYANO) IRON, ...
Authors:Volbeda, A, Martin, L, Barbier, E, Gutierrez-Sanz, O, DeLacey, A.L, Liebgott, P.P, Dementin, S, Rousset, M, Fontecilla-Camps, J.C.
Deposit date:2014-06-16
Release date:2014-10-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic studies of [NiFe]-hydrogenase mutants: towards consensus structures for the elusive unready oxidized states.
J. Biol. Inorg. Chem., 20, 2015
2LYL
DownloadVisualize
BU of 2lyl by Molmil
NOE-based 3D structure of the predissociated homodimer of CylR2 in equilibrium with monomer at 266K (-7 Celsius degrees)
Descriptor: CylR2
Authors:Jaremko, M, Jaremko, L, Kim, H, Cho, M, Schwieters, C.D, Giller, K, Becker, S, Zweckstetter, M.
Deposit date:2012-09-19
Release date:2013-02-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Cold denaturation of a protein dimer monitored at atomic resolution.
Nat.Chem.Biol., 9, 2013

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon