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4N82
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BU of 4n82 by Molmil
X-ray crystal structure of Streptococcus sanguinis NrdIox
Descriptor: FLAVIN MONONUCLEOTIDE, Ribonucleotide reductase, SULFATE ION
Authors:Boal, A.K, Rosenzweig, A.C.
Deposit date:2013-10-16
Release date:2014-01-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Streptococcus sanguinis Class Ib Ribonucleotide Reductase: HIGH ACTIVITY WITH BOTH IRON AND MANGANESE COFACTORS AND STRUCTURAL INSIGHTS.
J.Biol.Chem., 289, 2014
6CGM
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BU of 6cgm by Molmil
X-ray crystal structure of Bacillus subtilis ribonucleotide reductase NrdE alpha subunit (nucleotide free)
Descriptor: 1,2-ETHANEDIOL, Ribonucleoside-diphosphate reductase
Authors:Maggiolo, A.O, Boal, A.K.
Deposit date:2018-02-20
Release date:2018-05-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:An endogenous dAMP ligand inBacillus subtilisclass Ib RNR promotes assembly of a noncanonical dimer for regulation by dATP.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6CGL
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BU of 6cgl by Molmil
X-ray crystal structure of Bacillus subtilis ribonucleotide reductase NrdE alpha subunit dAMP-bound as-isolated (pH 4)
Descriptor: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, Ribonucleoside-diphosphate reductase, SULFATE ION
Authors:Maggiolo, A.O, Boal, A.K.
Deposit date:2018-02-20
Release date:2018-05-09
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:An endogenous dAMP ligand inBacillus subtilisclass Ib RNR promotes assembly of a noncanonical dimer for regulation by dATP.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6CGN
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BU of 6cgn by Molmil
X-ray crystal structure of Bacillus subtilis ribonucleotide reductase NrdE alpha subunit dAMP-bound (pH 7)
Descriptor: 1,2-ETHANEDIOL, 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, PHOSPHATE ION, ...
Authors:Maggiolo, A.O, Boal, A.K.
Deposit date:2018-02-20
Release date:2018-05-09
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:An endogenous dAMP ligand inBacillus subtilisclass Ib RNR promotes assembly of a noncanonical dimer for regulation by dATP.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4N83
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BU of 4n83 by Molmil
X-ray crystal structure of Streptococcus sanguinis dimanganese(II)-NrdF
Descriptor: MANGANESE (II) ION, Ribonucleoside-diphosphate reductase subunit beta
Authors:Boal, A.K, Rosenzweig, A.C.
Deposit date:2013-10-16
Release date:2014-01-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Streptococcus sanguinis Class Ib Ribonucleotide Reductase: HIGH ACTIVITY WITH BOTH IRON AND MANGANESE COFACTORS AND STRUCTURAL INSIGHTS.
J.Biol.Chem., 289, 2014
3D54
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BU of 3d54 by Molmil
Structure of PurLQS from Thermotoga maritima
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Formylglycinamide ribonucleotide amidotransferase, Phosphoribosylformylglycinamidine synthase 1, ...
Authors:Ealick, S.E, Morar, M.
Deposit date:2008-05-15
Release date:2008-07-22
Last modified:2017-02-01
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Formylglycinamide ribonucleotide amidotransferase from Thermotoga maritima: structural insights into complex formation.
Biochemistry, 47, 2008
3HJZ
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BU of 3hjz by Molmil
The structure of an aldolase from Prochlorococcus marinus
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Singer, A.U, Xu, X, Cui, H, Joachimiak, A, Edwards, A.M, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-05-22
Release date:2009-06-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Phage auxiliary metabolic genes and the redirection of cyanobacterial host carbon metabolism.
Proc.Natl.Acad.Sci.USA, 108, 2011
5CLG
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BU of 5clg by Molmil
Structure of PurE (N5-carboxyaminoimidazole ribonucleotide mutase) mutant H59N from the acidophilic bacterium Acetobacter aceti, at pH 5.4
Descriptor: CITRIC ACID, N5-carboxyaminoimidazole ribonucleotide mutase
Authors:Starks, C.M, Kappock, T.J.
Deposit date:2015-07-16
Release date:2016-07-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of a single tryptophan mutant of Acetobacter aceti PurE
To Be Published
5CLJ
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BU of 5clj by Molmil
Structure of PurE (N5-carboxyaminoimidazole ribonucleotide mutase) H59N from the acidophilic bacterium Acetobacter aceti, complexed with AIR (5-aminoimidazole ribonucleotide) and CO2
Descriptor: 1,2-ETHANEDIOL, 5-AMINOIMIDAZOLE RIBONUCLEOTIDE, CARBON DIOXIDE, ...
Authors:Starks, C.M, Kappock, T.J.
Deposit date:2015-07-16
Release date:2016-07-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of a single tryptophan mutant of Acetobacter aceti PurE
To Be Published
5CI4
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BU of 5ci4 by Molmil
Ribonucleotide reductase beta subunit
Descriptor: MU-OXO-DIIRON, Ribonucleoside-diphosphate reductase 1, beta subunit, ...
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2015-07-10
Release date:2016-06-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Biophysical Characterization of Fluorotyrosine Probes Site-Specifically Incorporated into Enzymes: E. coli Ribonucleotide Reductase As an Example.
J.Am.Chem.Soc., 138, 2016
5CI3
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BU of 5ci3 by Molmil
Ribonucleotide reductase Y122 2,3,5-F3Y variant
Descriptor: MU-OXO-DIIRON, Ribonucleoside-diphosphate reductase 1 subunit beta, SULFATE ION
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2015-07-10
Release date:2016-07-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Biophysical Characterization of Fluorotyrosine Probes Site-Specifically Incorporated into Enzymes: E. coli Ribonucleotide Reductase As an Example.
J.Am.Chem.Soc., 138, 2016
5CI1
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BU of 5ci1 by Molmil
Ribonucleotide reductase Y122 2,3-F2Y variant
Descriptor: CHLORIDE ION, MU-OXO-DIIRON, Ribonucleoside-diphosphate reductase 1, ...
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2015-07-10
Release date:2016-06-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Biophysical Characterization of Fluorotyrosine Probes Site-Specifically Incorporated into Enzymes: E. coli Ribonucleotide Reductase As an Example.
J.Am.Chem.Soc., 138, 2016
5CI2
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BU of 5ci2 by Molmil
Ribonucleotide reductase Y122 2,3,6-F3Y variant
Descriptor: MU-OXO-DIIRON, Ribonucleoside-diphosphate reductase 1 subunit beta, SULFATE ION
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2015-07-10
Release date:2016-06-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Biophysical Characterization of Fluorotyrosine Probes Site-Specifically Incorporated into Enzymes: E. coli Ribonucleotide Reductase As an Example.
J.Am.Chem.Soc., 138, 2016
5CI0
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BU of 5ci0 by Molmil
Ribonucleotide reductase Y122 3,5-F2Y variant
Descriptor: MU-OXO-DIIRON, Ribonucleoside-diphosphate reductase 1, beta subunit, ...
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2015-07-10
Release date:2016-06-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Biophysical Characterization of Fluorotyrosine Probes Site-Specifically Incorporated into Enzymes: E. coli Ribonucleotide Reductase As an Example.
J.Am.Chem.Soc., 138, 2016
2HS0
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BU of 2hs0 by Molmil
T. maritima PurL complexed with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Phosphoribosylformylglycinamidine synthase II
Authors:Ealick, S.E, Morar, M.
Deposit date:2006-07-20
Release date:2007-01-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Complexed Structures of Formylglycinamide Ribonucleotide Amidotransferase from Thermotoga maritima Describe a Novel ATP Binding Protein Superfamily
Biochemistry, 45, 2006
2HRY
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BU of 2hry by Molmil
T. maritima PurL complexed with AMPPCP
Descriptor: MAGNESIUM ION, PHOSPHATE ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Ealick, S.E, Morar, M.
Deposit date:2006-07-20
Release date:2007-01-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Complexed Structures of Formylglycinamide Ribonucleotide Amidotransferase from Thermotoga maritima Describe a Novel ATP Binding Protein Superfamily
Biochemistry, 45, 2006
2HS4
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BU of 2hs4 by Molmil
T. maritima PurL complexed with FGAR and AMPPCP
Descriptor: MAGNESIUM ION, N-(N-FORMYLGLYCYL)-5-O-PHOSPHONO-BETA-D-RIBOFURANOSYLAMINE, PHOSPHATE ION, ...
Authors:Ealick, S.E, Morar, M.
Deposit date:2006-07-21
Release date:2007-01-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Complexed Structures of Formylglycinamide Ribonucleotide Amidotransferase from Thermotoga maritima Describe a Novel ATP Binding Protein Superfamily
Biochemistry, 45, 2006
2HS3
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BU of 2hs3 by Molmil
T. maritima PurL complexed with FGAR
Descriptor: N-(N-FORMYLGLYCYL)-5-O-PHOSPHONO-BETA-D-RIBOFURANOSYLAMINE, PHOSPHATE ION, Phosphoribosylformylglycinamidine synthase II
Authors:Ealick, S.E, Morar, M.
Deposit date:2006-07-21
Release date:2007-01-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Complexed Structures of Formylglycinamide Ribonucleotide Amidotransferase from Thermotoga maritima Describe a Novel ATP Binding Protein Superfamily
Biochemistry, 45, 2006
4ERP
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BU of 4erp by Molmil
Crystal structure of a gemcitabine-diphosphate inhibited E. coli class Ia ribonucleotide reductase complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MU-OXO-DIIRON, Ribonucleoside-diphosphate reductase 1 subunit alpha, ...
Authors:Zimanyi, C.M, Drennan, C.L.
Deposit date:2012-04-20
Release date:2012-07-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (4.45 Å)
Cite:Tangled up in knots: structures of inactivated forms of E. coli class Ia ribonucleotide reductase.
Structure, 20, 2012
4ERM
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BU of 4erm by Molmil
Crystal structure of the dATP inhibited E. coli class Ia ribonucleotide reductase complex at 4 Angstroms resolution
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 2'-DEOXYADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Zimanyi, C.M, Drennan, C.L.
Deposit date:2012-04-20
Release date:2012-07-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.95 Å)
Cite:Tangled up in knots: structures of inactivated forms of E. coli class Ia ribonucleotide reductase.
Structure, 20, 2012
2HRU
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BU of 2hru by Molmil
T. maritima PurL complexed with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Phosphoribosylformylglycinamidine synthase II
Authors:Ealick, S.E, Morar, M.
Deposit date:2006-07-20
Release date:2007-01-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Complexed Structures of Formylglycinamide Ribonucleotide Amidotransferase from Thermotoga maritima Describe a Novel ATP Binding Protein Superfamily
Biochemistry, 45, 2006
2NSJ
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BU of 2nsj by Molmil
E. coli PurE H45Q mutant complexed with CAIR
Descriptor: 5-AMINO-1-(5-O-PHOSPHONO-BETA-D-RIBOFURANOSYL)-1H-IMIDAZOLE-4-CARBOXYLIC ACID, Phosphoribosylaminoimidazole carboxylase catalytic subunit
Authors:Ealick, S.E, Morar, M.
Deposit date:2006-11-04
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:N(5)-CAIR Mutase: Role of a CO(2) Binding Site and Substrate Movement in Catalysis.
Biochemistry, 46, 2007
2NSL
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BU of 2nsl by Molmil
E. coli PurE H45N mutant complexed with CAIR
Descriptor: 5-AMINO-1-(5-O-PHOSPHONO-BETA-D-RIBOFURANOSYL)-1H-IMIDAZOLE-4-CARBOXYLIC ACID, Phosphoribosylaminoimidazole carboxylase catalytic subunit
Authors:Ealick, S.E, Morar, M.
Deposit date:2006-11-04
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:N(5)-CAIR Mutase: Role of a CO(2) Binding Site and Substrate Movement in Catalysis.
Biochemistry, 46, 2007
2NSH
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BU of 2nsh by Molmil
E. coli PurE H45Q mutant complexed with nitro-AIR
Descriptor: ((2R,3S,4R,5R)-5-(5-AMINO-4-NITRO-1H-IMIDAZOL-1-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL)METHYL DIHYDROGEN PHOSPHATE, Phosphoribosylaminoimidazole carboxylase catalytic subunit
Authors:Ealick, S.E, Morar, M.
Deposit date:2006-11-04
Release date:2007-04-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:N(5)-CAIR Mutase: Role of a CO(2) Binding Site and Substrate Movement in Catalysis.
Biochemistry, 46, 2007
9DB2
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BU of 9db2 by Molmil
Class Ia ribonucleotide reductase with mechanism-based inhibitor N3CDP
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 4-amino-1-{(3xi)-3-C-amino-2-deoxy-5-O-[(S)-hydroxy(phosphonooxy)phosphoryl]-beta-D-threo-pentofuranosyl}pyrimidin-2(1H)-one, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Westmoreland, D.E, Drennan, C.L.
Deposit date:2024-08-23
Release date:2024-11-06
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:2.6- angstrom resolution cryo-EM structure of a class Ia ribonucleotide reductase trapped with mechanism-based inhibitor N 3 CDP.
Proc.Natl.Acad.Sci.USA, 121, 2024

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PDB entries from 2024-11-06

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