Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3GAV
DownloadVisualize
BU of 3gav by Molmil
Solution structure of Human Complement Factor H in 137 mM NaCl buffer
Descriptor: Complement factor H
Authors:Okemefuna, A.I, Nan, R, Gor, J, Perkins, S.J.
Deposit date:2009-02-18
Release date:2009-06-09
Last modified:2024-02-21
Method:SOLUTION SCATTERING
Cite:Electrostatic interactions contribute to the folded-back conformation of wild type human factor H.
J.Mol.Biol., 391, 2009
3NON
DownloadVisualize
BU of 3non by Molmil
Crystal Structure of Isocyanide Hydratase from Pseudomonas fluorescens
Descriptor: 1,2-ETHANEDIOL, Isocyanide hydratase
Authors:Lakshminarasimhan, M, Madzelan, P, Nan, R, Milkovic, N.M, Wilson, M.A.
Deposit date:2010-06-25
Release date:2010-07-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Evolution of New Enzymatic Function by Structural Modulation of Cysteine Reactivity in Pseudomonas fluorescens Isocyanide Hydratase.
J.Biol.Chem., 285, 2010
4AG4
DownloadVisualize
BU of 4ag4 by Molmil
Crystal structure of a DDR1-Fab complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, EPITHELIAL DISCOIDIN DOMAIN-CONTAINING RECEPTOR 1, ...
Authors:Carafoli, F, Mayer, M.C, Shiraishi, K, Pecheva, M.A, Chan, L.Y, Nan, R, Leitinger, B, Hohenester, E.
Deposit date:2012-01-24
Release date:2012-04-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the Discoidin Domain Receptor 1 Extracellular Region Bound to an Inhibitory Fab Fragment Reveals Features Important for Signaling.
Structure, 20, 2012
5XAQ
DownloadVisualize
BU of 5xaq by Molmil
Crystal structure of Animalia-specific tRNA deacylase from Mus musculus
Descriptor: Probable D-tyrosyl-tRNA(Tyr) deacylase 2
Authors:Kuncha, K.S, Kattula, B, Sankarnarayanan, R.
Deposit date:2017-03-14
Release date:2018-02-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:A chiral selectivity relaxed paralog of DTD for proofreading tRNA mischarging in Animalia
Nat Commun, 9, 2018
5XKQ
DownloadVisualize
BU of 5xkq by Molmil
Crystal structure of Msmeg3575 in complex with ammeline
Descriptor: 4,6-diamino-1,3,5-triazin-2-ol, ACETATE ION, CMP/dCMP deaminase, ...
Authors:Gaded, V.M, Anand, R.
Deposit date:2017-05-09
Release date:2017-08-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Selective Deamination of Mutagens by a Mycobacterial Enzyme
J. Am. Chem. Soc., 139, 2017
5XKO
DownloadVisualize
BU of 5xko by Molmil
Crystal structure of native Msmeg3575 deaminase from Mycobacterium smegmatis
Descriptor: ACETATE ION, CACODYLATE ION, Cytidine/deoxycytidylate deaminase, ...
Authors:Gaded, V.M, Anand, R.
Deposit date:2017-05-08
Release date:2017-08-09
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Selective Deamination of Mutagens by a Mycobacterial Enzyme
J. Am. Chem. Soc., 139, 2017
1U2Q
DownloadVisualize
BU of 1u2q by Molmil
Crystal structure of Mycobacterium tuberculosis Low Molecular Weight Protein Tyrosine Phosphatase (MPtpA) at 2.5A resolution with glycerol in the active site
Descriptor: CHLORIDE ION, GLYCEROL, low molecular weight protein-tyrosine-phosphatase
Authors:Madhurantakam, C, Rajakumara, E, Mazumdar, P.A, Saha, B, Mitra, D, Wiker, H.G, Sankaranarayanan, R, Das, A.K.
Deposit date:2004-07-20
Release date:2005-03-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Low-Molecular-Weight Protein Tyrosine Phosphatase from Mycobacterium tuberculosis at 1.9-A Resolution
J.Bacteriol., 187, 2005
1U2P
DownloadVisualize
BU of 1u2p by Molmil
Crystal structure of Mycobacterium tuberculosis Low Molecular Protein Tyrosine Phosphatase (MPtpA) at 1.9A resolution
Descriptor: CHLORIDE ION, low molecular weight protein-tyrosine-phosphatase
Authors:Madhurantakam, C, Rajakumara, E, Mazumdar, P.A, Saha, B, Mitra, D, Wiker, H.G, Sankaranarayanan, R, Das, A.K.
Deposit date:2004-07-20
Release date:2005-03-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Low-Molecular-Weight Protein Tyrosine Phosphatase from Mycobacterium tuberculosis at 1.9-A Resolution
J.Bacteriol., 187, 2005
4NBI
DownloadVisualize
BU of 4nbi by Molmil
D-aminoacyl-tRNA deacylase (DTD) from Plasmodium falciparum in complex with D-tyrosyl-3'-aminoadenosine at 1.86 Angstrom resolution
Descriptor: 3'-deoxy-3'-(D-tyrosylamino)adenosine, D-tyrosyl-tRNA(Tyr) deacylase, TRIETHYLENE GLYCOL
Authors:Ahmad, S, Routh, S.B, Kamarthapu, V, Sankaranarayanan, R.
Deposit date:2013-10-23
Release date:2013-12-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Mechanism of chiral proofreading during translation of the genetic code.
Elife, 2, 2013
5XYH
DownloadVisualize
BU of 5xyh by Molmil
Crystal Structure of catalytic domain of 1,4-beta-Cellobiosidase (CbsA) from Xanthomonas oryzae pv. oryzae
Descriptor: CbsA
Authors:Kumar, S, Haque, A.S, Nathawat, R, Sankaranaryanan, R.
Deposit date:2017-07-07
Release date:2018-05-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.864 Å)
Cite:A mutation in an exoglucanase of Xanthomonas oryzae pv. oryzae, which confers an endo mode of activity, affects bacterial virulence, but not the induction of immune responses, in rice
Mol. Plant Pathol., 19, 2018
5E7V
DownloadVisualize
BU of 5e7v by Molmil
Potent Vitamin D Receptor Agonist
Descriptor: 1-ALPHA-HYDROXY-27-NOR-25-O-CARBONYL-VITAMIN D3, Nuclear receptor coactivator 1, Vitamin D3 receptor A
Authors:Otero, R, Seoane, S, Sigueiro, R, Belorusova, A.Y, Maestro, M.A, Perez-Fernandez, R, Rochel, N, Mourino, A.
Deposit date:2015-10-13
Release date:2015-11-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Carborane-based design of a potent vitamin D receptor agonist.
Chem Sci, 7, 2016
4U5Q
DownloadVisualize
BU of 4u5q by Molmil
High resolution crystal structure of reductase (R) domain of nonribosomal peptide synthetase from Mycobacterium tuberculosis
Descriptor: 3,6,9,12,15,18,21,24,27-NONAOXANONACOSANE-1,29-DIOL, Peptide synthetase
Authors:Patel, K.D, Haque, A.S, Priyadarshan, K, Sankaranarayanan, R.
Deposit date:2014-07-25
Release date:2016-01-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.811 Å)
Cite:High resolution structure of R-domain of nonribosomal peptide synthetase from Mycobacterium tuberculosis
To Be Published
5Z6D
DownloadVisualize
BU of 5z6d by Molmil
Crystal structure of Abundant Perithecial Protein (APP) from Neurospora crassa
Descriptor: DUF1881 domain-containing protein
Authors:Srivastava, S.S, Sankaranarayanan, R.
Deposit date:2018-01-22
Release date:2019-01-23
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Interface interactions between beta gamma-crystallin domain and Ig-like domain render Ca2+-binding site inoperative in abundant perithecial protein of Neurospora crassa.
Mol.Microbiol., 110, 2018
5E0N
DownloadVisualize
BU of 5e0n by Molmil
Crystal Structure of MSMEG_3139, a monofunctional enoyl CoA isomerase from M.smegmatis
Descriptor: Enoyl-CoA hydratase/isomerase
Authors:Priyadarshan, K, Haque, A.S, Anandakrishnan, M, Sankaranarayanan, R.
Deposit date:2015-09-29
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.061 Å)
Cite:Unsaturated Lipid Assimilation by Mycobacteria Requires Auxiliary cis-trans Enoyl CoA Isomerase.
Chem.Biol., 22, 2015
5Z6E
DownloadVisualize
BU of 5z6e by Molmil
Crystal structure of a beta gamma-crystallin domain of Abundant Perithecial Protein (APP) from Neurospora crassa in the Ca2+-bound form
Descriptor: CALCIUM ION, DUF1881 domain-containing protein, POTASSIUM ION
Authors:Srivastava, S.S, Sankaranarayanan, R.
Deposit date:2018-01-22
Release date:2019-01-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.864 Å)
Cite:Interface interactions between beta gamma-crystallin domain and Ig-like domain render Ca2+-binding site inoperative in abundant perithecial protein of Neurospora crassa.
Mol.Microbiol., 110, 2018
3EST
DownloadVisualize
BU of 3est by Molmil
STRUCTURE OF NATIVE PORCINE PANCREATIC ELASTASE AT 1.65 ANGSTROMS RESOLUTION
Descriptor: CALCIUM ION, PORCINE PANCREATIC ELASTASE, SULFATE ION
Authors:Meyer, E.F, Cole, G, Radhakrishnan, R, Epp, O.
Deposit date:1987-09-17
Release date:1988-01-16
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure of native porcine pancreatic elastase at 1.65 A resolutions.
Acta Crystallogr.,Sect.B, 44, 1988
6UTL
DownloadVisualize
BU of 6utl by Molmil
Yeast Thiol Specific antoxidant 2 with C171S mutation and catalytic cysteine alkylated with iodoacetamide
Descriptor: Peroxiredoxin TSA2
Authors:Tairum, C.A, Bannitz-Fernandes, R, Tonoli, C.C.C, Murakami, M.T, de Oliveira, M.A, Netto, L.E.S.
Deposit date:2019-10-29
Release date:2020-07-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Reduction of sulfenic acids by ascorbate in proteins, connecting thiol-dependent to alternative redox pathways.
Free Radic Biol Med, 156, 2020
7V2M
DownloadVisualize
BU of 7v2m by Molmil
T.thermophilus 30S ribosome with KsgA, class K1k4
Descriptor: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
Deposit date:2021-08-09
Release date:2022-04-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
7V2L
DownloadVisualize
BU of 7v2l by Molmil
T.thermophilus 30S ribosome with KsgA, class K1k2
Descriptor: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
Deposit date:2021-08-09
Release date:2022-04-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
7V2P
DownloadVisualize
BU of 7v2p by Molmil
T.thermophilus 30S ribosome with KsgA, class K5
Descriptor: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
Deposit date:2021-08-09
Release date:2022-04-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
7V2Q
DownloadVisualize
BU of 7v2q by Molmil
T.thermophilus 30S ribosome with KsgA, class K6
Descriptor: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
Deposit date:2021-08-09
Release date:2022-04-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
7V2N
DownloadVisualize
BU of 7v2n by Molmil
T.thermophilus 30S ribosome with KsgA, class K2
Descriptor: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
Deposit date:2021-08-09
Release date:2022-04-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
7V2O
DownloadVisualize
BU of 7v2o by Molmil
T.thermophilus 30S ribosome with KsgA, class K4
Descriptor: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
Deposit date:2021-08-09
Release date:2022-04-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
6IFT
DownloadVisualize
BU of 6ift by Molmil
KsgA from Bacillus subtilis in complex with SAM
Descriptor: Ribosomal RNA small subunit methyltransferase A, S-ADENOSYLMETHIONINE
Authors:Bhujbalrao, R, Anand, R.
Deposit date:2018-09-21
Release date:2019-01-30
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Deciphering Determinants in Ribosomal Methyltransferases That Confer Antimicrobial Resistance.
J. Am. Chem. Soc., 141, 2019
6IFW
DownloadVisualize
BU of 6ifw by Molmil
crystal structure of chimeric construct of KsgA with loop 1 from erm
Descriptor: Ribosomal RNA small subunit methyltransferase A
Authors:Bhujbalrao, R, Anand, R.
Deposit date:2018-09-21
Release date:2019-01-30
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Deciphering Determinants in Ribosomal Methyltransferases That Confer Antimicrobial Resistance.
J. Am. Chem. Soc., 141, 2019

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon