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2ZM6
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Crystal structure of the Thermus thermophilus 30S ribosomal subunit
Descriptor: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Kaminishi, T, Wang, H, Kawazoe, M, Ishii, R, Schluenzen, F, Hanawa-Suetsugu, K, Wilson, D.N, Nomura, M, Takemoto, C, Shirouzu, M, Fucini, P, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-04-11
Release date:2009-04-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structure of the Thermus thermophilus 30S ribosomal subunit
To be Published
2ZDG
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BU of 2zdg by Molmil
Crystal structure of D-Alanine:D-Alanine Ligase with ADP from Thermus thermophius HB8
Descriptor: ADENOSINE-5'-DIPHOSPHATE, D-alanine--D-alanine ligase, MAGNESIUM ION
Authors:Kitamura, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-11-22
Release date:2008-05-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of D-Alanine:D-Alanine Ligase with ADP from Thermus thermophius HB8
To be Published
2ZIG
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BU of 2zig by Molmil
Crystal Structure of TTHA0409, Putative DNA Modification Methylase from Thermus thermophilus HB8
Descriptor: Putative modification methylase
Authors:Morita, R, Ishikawa, H, Nakagawa, N, Masui, R, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-02-15
Release date:2008-07-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a putative DNA methylase TTHA0409 from Thermus thermophilus HB8
Proteins, 73, 2008
2ZTI
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BU of 2zti by Molmil
Structures of dimeric nonstandard nucleotide triphosphate pyrophosphatase from Pyrococcus horikoshii OT3: functional significance of interprotomer conformational changes
Descriptor: MANGANESE (II) ION, NTPASE
Authors:Lokanath, N.K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-10-06
Release date:2008-10-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of dimeric nonstandard nucleotide triphosphate pyrophosphatase from Pyrococcus horikoshii OT3: functional significance of interprotomer conformational changes
J.Mol.Biol., 375, 2008
2ZVB
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BU of 2zvb by Molmil
Crystal structure of TT0207 from Thermus thermophilus HB8
Descriptor: Precorrin-3 C17-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-11-04
Release date:2009-05-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of TT0207 from Thermus thermophilus HB8
To be published
2ZVF
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BU of 2zvf by Molmil
Crystal structure of Archaeoglobus fulgidus alanyl-tRNA synthetase C-terminal dimerization domain
Descriptor: Alanyl-tRNA synthetase, SULFATE ION
Authors:Naganuma, M, Sekine, S, Fukunaga, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-11-06
Release date:2009-06-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Unique protein architecture of alanyl-tRNA synthetase for aminoacylation, editing, and dimerization.
Proc.Natl.Acad.Sci.USA, 106, 2009
2ZQQ
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BU of 2zqq by Molmil
Crystal structure of human AUH (3-methylglutaconyl-coa hydratase) mixed with (AUUU)24A RNA
Descriptor: Methylglutaconyl-CoA hydratase
Authors:Kurimoto, K, Kuwasako, K, Muto, Y, Nureki, O, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-08-16
Release date:2009-06-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:AU-rich RNA-binding induces changes in the quaternary structure of AUH
Proteins, 75, 2009
2ZBR
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BU of 2zbr by Molmil
Crystal structure of ribosomal protein L11 methyltransferase from Thermus thermophilus in complex with S-adenosyl-ornithine
Descriptor: Ribosomal protein L11 methyltransferase, SINEFUNGIN
Authors:Kaminishi, T, Sakai, H, Takemoto-Hori, C, Terada, T, Nakagawa, N, Maoka, N, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-10-26
Release date:2008-11-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of ribosomal protein L11 methyltransferase from Thermus thermophilus
To be Published
1V3V
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BU of 1v3v by Molmil
Crystal structure of leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase complexed with NADP and 15-oxo-PGE2
Descriptor: (5E,13E)-11-HYDROXY-9,15-DIOXOPROSTA-5,13-DIEN-1-OIC ACID, CHLORIDE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Hori, T, Yokomizo, T, Ago, H, Sugahara, M, Ueno, G, Yamamoto, M, Kumasaka, T, Shimizu, T, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-11-06
Release date:2004-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of leukotriene B4 12-hydroxydehydrogenase/15-Oxo-prostaglandin 13-reductase catalytic mechanism and a possible Src homology 3 domain binding loop
J.Biol.Chem., 279, 2004
1V61
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Solution Structure of the Pleckstrin Homology Domain of alpha-Pix
Descriptor: Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
Authors:Nakanishi, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-11-26
Release date:2004-05-26
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of the Pleckstrin Homology Domain of alpha-Pix
To be Published
1UIL
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BU of 1uil by Molmil
Double-stranded RNA-binding motif of Hypothetical protein BAB28848
Descriptor: Double-stranded RNA-binding motif
Authors:Nagata, T, Muto, Y, Hayashi, F, Hamana, H, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Kobayashi, N, Tanaka, A, Osanai, T, Matsuo, Y, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-17
Release date:2004-11-16
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure of Double-stranded RNA-binding motif of Hypothetical protein BAB28848
To be Published
1V81
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BU of 1v81 by Molmil
Solution structures of ubiquitin at 30 bar and 3 kbar
Descriptor: Ubiquitin/60s ribosomal protein L40 fusion
Authors:Kitahara, R, Yokoyama, S, Akasaka, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-12-27
Release date:2005-02-15
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR snapshots of a fluctuating protein structure: ubiquitin at 30 bar-3 kbar.
J.Mol.Biol., 347, 2005
1V8H
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BU of 1v8h by Molmil
Crystal structure of TT0351 protein from Thermus thermophilus HB8
Descriptor: sulfur oxidation protein SoxZ
Authors:Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-09
Release date:2005-01-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of SoxZ protein from Thermus thermophilus HB8
To be Published
1V8L
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BU of 1v8l by Molmil
Structure Analysis of the ADP-ribose pyrophosphatase complexed with ADP-ribose
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, ADP-ribose pyrophosphatase
Authors:Yoshiba, S, Ooga, T, Nakagawa, N, Shibata, T, Inoue, Y, Yokoyama, S, Kuramitsu, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-10
Release date:2004-10-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insights into the Thermus thermophilus ADP-ribose pyrophosphatase mechanism via crystal structures with the bound substrate and metal
J.Biol.Chem., 279, 2004
1V8R
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BU of 1v8r by Molmil
Crystal structure analysis of the ADP-ribose pyrophosphatase complexed with ADP-ribose and Zn
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, ADP-ribose pyrophosphatase, ZINC ION
Authors:Yoshiba, S, Ooga, T, Nakagawa, N, Shibata, T, Inoue, Y, Yokoyama, S, Kuramitsu, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-14
Release date:2005-02-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into the Thermus thermophilus ADP-ribose pyrophosphatase mechanism via crystal structures with the bound substrate and metal
J.Biol.Chem., 279, 2004
1V8Y
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BU of 1v8y by Molmil
Crystal structure analysis of the ADP-ribose pyrophosphatase of E86Q mutant, complexed with ADP-ribose and Zn
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, ADP-ribose pyrophosphatase, ZINC ION
Authors:Yoshiba, S, Ooga, T, Nakagawa, N, Shibata, T, Inoue, Y, Yokoyama, S, Kuramitsu, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-15
Release date:2004-10-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural insights into the Thermus thermophilus ADP-ribose pyrophosphatase mechanism via crystal structures with the bound substrate and metal
J.Biol.Chem., 279, 2004
1UIT
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BU of 1uit by Molmil
Solution structure of RSGI RUH-006, The third PDZ domain OF hDlg5 (KIAA0583) protein [Homo sapiens]
Descriptor: HUMAN DISCS LARGE 5 PROTEIN
Authors:Abe, T, Hirota, H, Kobayashi, N, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-22
Release date:2004-01-22
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of RSGI RUH-006, The third PDZ domain OF hDlg5 (KIAA0583) protein [Homo sapiens]
To be Published
1UJD
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BU of 1ujd by Molmil
Solution Structure of RSGI RUH-003, a PDZ domain of hypothetical KIAA0559 protein from human cDNA
Descriptor: KIAA0559 protein
Authors:Ohashi, W, Hirota, H, Yamazaki, T, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-31
Release date:2004-01-31
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of RSGI RUH-003, a PDZ domain of hypothetical KIAA0559 protein from human cDNA
To be published
1UJR
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BU of 1ujr by Molmil
Solution structure of WWE domain in BAB28015
Descriptor: hypothetical protein AK012080
Authors:He, F, Muto, Y, Hamana, H, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Kobayashi, N, Tanaka, A, Osanai, T, Matsuo, Y, Ohara, O, Nagase, T, Kikuno, R, Nagayama, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-08-11
Release date:2004-10-05
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of WWE domain in BAB28015
To be Published
2ZVC
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Form 2 structure (C2221) of TT0207 from Thermus thermophilus HB8
Descriptor: Precorrin-3 C17-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-11-04
Release date:2009-05-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Form 2 structure (C2221) of TT0207 from Thermus thermophilus HB8
To be published
1UJT
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BU of 1ujt by Molmil
Solution structure of the second fibronectin Type III domain of human KIAA1568 protein
Descriptor: KIAA1568 protein
Authors:Tochio, N, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-08-11
Release date:2004-02-11
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the second fibronectin Type III domain of human KIAA1568 protein
To be Published
1UJX
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BU of 1ujx by Molmil
The forkhead associated (FHA) domain like structure from mouse polynucleotide kinase 3'-phosphatase
Descriptor: polynucleotide kinase 3'-phosphatase
Authors:Tomizawa, T, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-08-12
Release date:2004-02-12
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The forkhead associated (FHA) domain like structure from mouse polynucleotide kinase 3'-phosphatase
To be Published
1V5M
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BU of 1v5m by Molmil
Solution Structure of the Pleckstrin Homology Domain of Mouse APS
Descriptor: SH2 and PH domain-containing adapter protein APS
Authors:Li, H, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-11-25
Release date:2004-05-25
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of the Pleckstrin Homology Domain of Mouse APS
To be Published
1V87
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Solution Structure of the Ring-H2 Finger Domain of Mouse Deltex Protein 2
Descriptor: Deltex protein 2, ZINC ION
Authors:Miyamoto, K, Muto, Y, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-12-29
Release date:2004-06-29
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of the Ring-H2 Finger Domain of Mouse Deltex Protein 2
To be Published
3ACD
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BU of 3acd by Molmil
Crystal structure of hypoxanthine-guanine phosphoribosyltransferase with IMP from Thermus thermophilus HB8
Descriptor: 1,4-DIETHYLENE DIOXIDE, Hypoxanthine-guanine phosphoribosyltransferase, INOSINIC ACID
Authors:Kanagawa, M, Baba, S, Hirotsu, K, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-12-30
Release date:2010-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structures of hypoxanthine-guanine phosphoribosyltransferase (TTHA0220) from Thermus thermophilus HB8.
Acta Crystallogr.,Sect.F, 66, 2010

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