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1L1L
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BU of 1l1l by Molmil
CRYSTAL STRUCTURE OF B-12 DEPENDENT (CLASS II) RIBONUCLEOTIDE REDUCTASE
Descriptor: RIBONUCLEOSIDE TRIPHOSPHATE REDUCTASE
Authors:Sintchak, M.D, Arjara, G, Kellogg, B.A, Stubbe, J, Drennan, C.L.
Deposit date:2002-02-18
Release date:2002-04-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The crystal structure of class II ribonucleotide reductase reveals how an allosterically regulated monomer mimics a dimer.
Nat.Struct.Biol., 9, 2002
1GSO
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BU of 1gso by Molmil
GLYCINAMIDE RIBONUCLEOTIDE SYNTHETASE (GAR-SYN) FROM E. COLI.
Descriptor: PROTEIN (GLYCINAMIDE RIBONUCLEOTIDE SYNTHETASE)
Authors:Wang, W, Kappock, T.J, Stubbe, J, Ealick, S.E.
Deposit date:1998-09-08
Release date:1998-12-09
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:X-ray crystal structure of glycinamide ribonucleotide synthetase from Escherichia coli.
Biochemistry, 37, 1998
1G5E
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BU of 1g5e by Molmil
NMR STRUCTURE OF AN OLIGONUCLEOTIDE CONTAINING AN ABASIC SITE: BETA ANOMER
Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*(AAB)P*AP*CP*TP*GP*GP*G)-3', 5'-D(*CP*CP*CP*AP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3'
Authors:Hoehn, S.T, Turner, C.J, Stubbe, J.
Deposit date:2000-10-31
Release date:2001-08-22
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of an oligonucleotide containing an abasic site: evidence for an unusual deoxyribose conformation.
Nucleic Acids Res., 29, 2001
1GJ0
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BU of 1gj0 by Molmil
NMR STRUCTURE OF AN OLIGONUCLEOTIDE CONTAINING AN ABASIC SITE: BETA ANOMER
Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*(AAB)P*AP*CP*TP*GP*GP*G)-3', 5'-D(*CP*CP*CP*AP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3'
Authors:Hoehn, S.T, Turner, C.J, Stubbe, J.
Deposit date:2000-10-31
Release date:2001-08-22
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of an oligonucleotide containing an abasic site: evidence for an unusual deoxyribose conformation.
Nucleic Acids Res., 29, 2001
1G5D
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BU of 1g5d by Molmil
NMR STRUCTURE OF AN OLIGONUCLEOTIDE CONTAINING AN ABASIC SITE: ALPHA ANOMER
Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*(D1P)P*AP*CP*TP*GP*GP*G)-3', 5'-D(*CP*CP*CP*AP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3'
Authors:Hoehn, S.T, Turner, C.J, Stubbe, J.
Deposit date:2000-10-31
Release date:2001-08-22
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of an oligonucleotide containing an abasic site: evidence for an unusual deoxyribose conformation.
Nucleic Acids Res., 29, 2001
1GIZ
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BU of 1giz by Molmil
NMR STRUCTURE OF AN OLIGONUCLEOTIDE CONTAINING AN ABASIC SITE: ALPHA ANOMER
Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*(D1P)P*AP*CP*TP*GP*GP*G)-3', 5'-D(*CP*CP*CP*AP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3'
Authors:Hoehn, S.T, Turner, C.J, Stubbe, J.
Deposit date:2000-10-31
Release date:2001-08-22
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of an oligonucleotide containing an abasic site: evidence for an unusual deoxyribose conformation.
Nucleic Acids Res., 29, 2001
1B6R
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BU of 1b6r by Molmil
N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE SYNTHETASE FROM E. COLI
Descriptor: PROTEIN (N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE SYNTHETASE), SULFATE ION
Authors:Thoden, J.B, Kappock, T.J, Stubbe, J, Holden, H.M.
Deposit date:1999-01-17
Release date:1999-11-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Three-dimensional structure of N5-carboxyaminoimidazole ribonucleotide synthetase: a member of the ATP grasp protein superfamily.
Biochemistry, 38, 1999
1CLI
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BU of 1cli by Molmil
X-RAY CRYSTAL STRUCTURE OF AMINOIMIDAZOLE RIBONUCLEOTIDE SYNTHETASE (PURM), FROM THE E. COLI PURINE BIOSYNTHETIC PATHWAY, AT 2.5 A RESOLUTION
Descriptor: PROTEIN (PHOSPHORIBOSYL-AMINOIMIDAZOLE SYNTHETASE), SULFATE ION
Authors:Li, C, Kappock, T.J, Stubbe, J, Weaver, T.M, Ealick, S.E.
Deposit date:1999-04-28
Release date:1999-10-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray crystal structure of aminoimidazole ribonucleotide synthetase (PurM), from the Escherichia coli purine biosynthetic pathway at 2.5 A resolution.
Structure Fold.Des., 7, 1999
1B6S
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BU of 1b6s by Molmil
STRUCTURE OF N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE SYNTHETASE
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PROTEIN (N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE SYNTHETASE)
Authors:Thoden, J.B, Kappock, T.J, Stubbe, J, Holden, H.M.
Deposit date:1999-01-18
Release date:1999-11-30
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Three-dimensional structure of N5-carboxyaminoimidazole ribonucleotide synthetase: a member of the ATP grasp protein superfamily.
Biochemistry, 38, 1999
8RK1
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BU of 8rk1 by Molmil
Crystal structure of FutA bound to Fe(III) solved by neutron diffraction
Descriptor: FE (III) ION, Putative iron ABC transporter, substrate binding protein
Authors:Bolton, R, Tews, I.
Deposit date:2023-12-22
Release date:2024-01-17
Last modified:2024-03-27
Method:NEUTRON DIFFRACTION (2.095 Å)
Cite:A redox switch allows binding of Fe(II) and Fe(III) ions in the cyanobacterial iron-binding protein FutA from Prochlorococcus.
Proc.Natl.Acad.Sci.USA, 121, 2024
8C4Y
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BU of 8c4y by Molmil
SFX structure of FutA bound to Fe(III)
Descriptor: FE (III) ION, Putative iron ABC transporter, substrate binding protein
Authors:Bolton, R, Tews, I.
Deposit date:2023-01-05
Release date:2023-08-30
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A redox switch allows binding of Fe(II) and Fe(III) ions in the cyanobacterial iron-binding protein FutA from Prochlorococcus.
Proc.Natl.Acad.Sci.USA, 121, 2024
8OEI
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BU of 8oei by Molmil
SFX structure of FutA after an accumulated dose of 350 kGy
Descriptor: FE (III) ION, Putative iron ABC transporter, substrate binding protein
Authors:Bolton, R, Tews, I.
Deposit date:2023-03-10
Release date:2023-08-30
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A redox switch allows binding of Fe(II) and Fe(III) ions in the cyanobacterial iron-binding protein FutA from Prochlorococcus.
Proc.Natl.Acad.Sci.USA, 121, 2024
8OEM
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BU of 8oem by Molmil
Crystal structure of FutA bound to Fe(II)
Descriptor: FE (II) ION, Putative iron ABC transporter, substrate binding protein
Authors:Bolton, R, Tews, I.
Deposit date:2023-03-10
Release date:2023-08-30
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A redox switch allows binding of Fe(II) and Fe(III) ions in the cyanobacterial iron-binding protein FutA from Prochlorococcus.
Proc.Natl.Acad.Sci.USA, 121, 2024
8OGG
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BU of 8ogg by Molmil
Crystal structure of FutA after an accumulated dose of 5 kGy
Descriptor: FE (III) ION, Putative iron ABC transporter, substrate binding protein
Authors:Bolton, R, Tews, I.
Deposit date:2023-03-20
Release date:2023-08-30
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:A redox switch allows binding of Fe(II) and Fe(III) ions in the cyanobacterial iron-binding protein FutA from Prochlorococcus.
Proc.Natl.Acad.Sci.USA, 121, 2024
8B2R
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BU of 8b2r by Molmil
Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikF with a rice (Oryza sativa) RGA5 HMA domain mutant.
Descriptor: 1,2-ETHANEDIOL, AVR-Pik protein, CHLORIDE ION, ...
Authors:Bentham, A.R, Banfield, M.J.
Deposit date:2022-09-14
Release date:2022-10-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Allelic compatibility in plant immune receptors facilitates engineering of new effector recognition specificities.
Plant Cell, 35, 2023
6CGM
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BU of 6cgm by Molmil
X-ray crystal structure of Bacillus subtilis ribonucleotide reductase NrdE alpha subunit (nucleotide free)
Descriptor: 1,2-ETHANEDIOL, Ribonucleoside-diphosphate reductase
Authors:Maggiolo, A.O, Boal, A.K.
Deposit date:2018-02-20
Release date:2018-05-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:An endogenous dAMP ligand inBacillus subtilisclass Ib RNR promotes assembly of a noncanonical dimer for regulation by dATP.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6CGL
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BU of 6cgl by Molmil
X-ray crystal structure of Bacillus subtilis ribonucleotide reductase NrdE alpha subunit dAMP-bound as-isolated (pH 4)
Descriptor: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, Ribonucleoside-diphosphate reductase, SULFATE ION
Authors:Maggiolo, A.O, Boal, A.K.
Deposit date:2018-02-20
Release date:2018-05-09
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:An endogenous dAMP ligand inBacillus subtilisclass Ib RNR promotes assembly of a noncanonical dimer for regulation by dATP.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4U3E
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BU of 4u3e by Molmil
Anaerobic ribonucleotide reductase
Descriptor: ACETATE ION, CITRIC ACID, GLYCEROL, ...
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2014-07-20
Release date:2014-09-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:The class III ribonucleotide reductase from Neisseria bacilliformis can utilize thioredoxin as a reductant.
Proc.Natl.Acad.Sci.USA, 111, 2014
6AUI
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BU of 6aui by Molmil
Human ribonucleotide reductase large subunit (alpha) with dATP and CDP
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Brignole, E.J, Drennan, C.L, Asturias, F.J, Tsai, K.L, Penczek, P.A.
Deposit date:2017-09-01
Release date:2018-04-18
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:3.3- angstrom resolution cryo-EM structure of human ribonucleotide reductase with substrate and allosteric regulators bound.
Elife, 7, 2018
6MW3
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BU of 6mw3 by Molmil
EM structure of Bacillus subtilis ribonucleotide reductase inhibited filament composed of NrdE alpha subunit and NrdF beta subunit with dATP
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, Ribonucleoside-diphosphate reductase, Ribonucleoside-diphosphate reductase NrdF beta subunit
Authors:Thomas, W.C, Bacik, J.P, Kaelber, J.T, Ando, N.
Deposit date:2018-10-29
Release date:2019-06-19
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.65 Å)
Cite:Convergent allostery in ribonucleotide reductase.
Nat Commun, 10, 2019
2AV8
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BU of 2av8 by Molmil
Y122F MUTANT OF RIBONUCLEOTIDE REDUCTASE FROM ESCHERICHIA COLI
Descriptor: FE (II) ION, MU-OXO-DIIRON, RIBONUCLEOTIDE REDUCTASE R2
Authors:Han, S, Arvai, A, Tainer, J.A.
Deposit date:1997-09-30
Release date:1998-10-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Characterization of Y122F R2 of Escherichia coli ribonucleotide reductase by time-resolved physical biochemical methods and X-ray crystallography.
Biochemistry, 37, 1998
1QCZ
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BU of 1qcz by Molmil
CRYSTAL STRUCTURE OF E. COLI PURE, AN UNUSUAL MUTASE THAT CATALYZES THE CONVERSION OF N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE (N5-CAIR) TO 4-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE (CAIR) IN THE PURINE BIOSYNTHETIC PATHWAY
Descriptor: N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE MUTASE
Authors:Ealick, S.E, Mathews, I.I.
Deposit date:1999-05-10
Release date:1999-11-10
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of Escherichia coli PurE, an unusual mutase in the purine biosynthetic pathway.
Structure Fold.Des., 7, 1999
6MT9
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BU of 6mt9 by Molmil
X-ray crystal structure of Bacillus subtilis ribonucleotide reductase NrdE alpha subunit with TTP, ATP, and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Thomas, W.C, Brooks, F.P, Bacik, J.P, Ando, N.
Deposit date:2018-10-19
Release date:2019-06-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Convergent allostery in ribonucleotide reductase.
Nat Commun, 10, 2019
6MV9
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BU of 6mv9 by Molmil
X-ray crystal structure of Bacillus subtilis ribonucleotide reductase NrdE alpha subunit with TTP and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ribonucleoside-diphosphate reductase, ...
Authors:Thomas, W.C, Brooks, F.P, Bacik, J.P, Ando, N.
Deposit date:2018-10-24
Release date:2019-06-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Convergent allostery in ribonucleotide reductase.
Nat Commun, 10, 2019
4N82
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BU of 4n82 by Molmil
X-ray crystal structure of Streptococcus sanguinis NrdIox
Descriptor: FLAVIN MONONUCLEOTIDE, Ribonucleotide reductase, SULFATE ION
Authors:Boal, A.K, Rosenzweig, A.C.
Deposit date:2013-10-16
Release date:2014-01-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Streptococcus sanguinis Class Ib Ribonucleotide Reductase: HIGH ACTIVITY WITH BOTH IRON AND MANGANESE COFACTORS AND STRUCTURAL INSIGHTS.
J.Biol.Chem., 289, 2014

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