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8D05
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BU of 8d05 by Molmil
Hallucinated C2 protein assembly HALC2_065
Descriptor: HALC2_065
Authors:Ragotte, R.J, Bera, A.K, Wicky, B.I.M, Milles, L.F, Baker, D.
Deposit date:2022-05-25
Release date:2022-09-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Hallucinating symmetric protein assemblies.
Science, 378, 2022
8D08
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BU of 8d08 by Molmil
Hallucinated C4 protein assembly HALC4_135
Descriptor: HALC4_135
Authors:Ragotte, R.J, Bera, A.K, Wicky, B.I.M, Milles, L.F, Baker, D.
Deposit date:2022-05-25
Release date:2022-09-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Hallucinating symmetric protein assemblies.
Science, 378, 2022
8D09
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BU of 8d09 by Molmil
Hallucinated C4 protein assembly HALC4_136
Descriptor: HALC4_136
Authors:Ragotte, R.J, Bera, A.K, Wicky, B.I.M, Milles, L.F, Baker, D.
Deposit date:2022-05-25
Release date:2022-09-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Hallucinating symmetric protein assemblies.
Science, 378, 2022
8D06
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BU of 8d06 by Molmil
Hallucinated C3 protein assembly HALC3_104
Descriptor: HALC3_104
Authors:Ragotte, R.J, Bera, A.K, Wicky, B.I.M, Milles, L.F, Baker, D.
Deposit date:2022-05-25
Release date:2022-09-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Hallucinating symmetric protein assemblies.
Science, 378, 2022
8D03
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BU of 8d03 by Molmil
Hallucinated C2 protein assembly HALC2_068
Descriptor: HALC2_068
Authors:Ragotte, R.J, Bera, A.K, Wicky, B.I.M, Milles, L.F, Baker, D.
Deposit date:2022-05-25
Release date:2022-09-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Hallucinating symmetric protein assemblies.
Science, 378, 2022
6X1K
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BU of 6x1k by Molmil
Solution NMR structure of de novo designed TMB2.3
Descriptor: De novo designed transmembrane beta-barrel TMB2.3
Authors:Liang, B, Vorobieva, A.A, Chow, C.M, Baker, D, Tamm, L.K.
Deposit date:2020-05-19
Release date:2021-02-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:De novo design of transmembrane beta barrels.
Science, 371, 2021
8U5A
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BU of 8u5a by Molmil
Improving protein expression, stability, and function with ProteinMPNN
Descriptor: Designed myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kalvet, I, Bera, A.K, Baker, D.
Deposit date:2023-09-12
Release date:2024-01-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Improving Protein Expression, Stability, and Function with ProteinMPNN.
J.Am.Chem.Soc., 146, 2024
7K3H
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BU of 7k3h by Molmil
Crystal structure of deep network hallucinated protein 0217
Descriptor: Network hallucinated protein 0217
Authors:Pellock, S.J, Anishchenko, I, Chidyausiku, T.M, Bera, A.K, DiMaio, F, Baker, D.
Deposit date:2020-09-11
Release date:2021-12-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:De novo protein design by deep network hallucination.
Nature, 600, 2021
7M0Q
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BU of 7m0q by Molmil
Crystal structure of deep network hallucinated protein 0738_mod
Descriptor: Network hallucinated protein 0738_mod
Authors:Pellock, S.J, Bera, A.K, Anishchenko, I, Baker, D.
Deposit date:2021-03-11
Release date:2021-12-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:De novo protein design by deep network hallucination.
Nature, 600, 2021
7M5T
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BU of 7m5t by Molmil
Solution NMR structure of de novo designed protein 0515
Descriptor: De novo designed protein 0515
Authors:Ramelot, T.A, Hao, J, Baker, D, Montelione, G.T.
Deposit date:2021-03-24
Release date:2021-12-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:De novo protein design by deep network hallucination.
Nature, 600, 2021
8E55
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BU of 8e55 by Molmil
Design of Diverse Asymmetric Pockets in de novo Homo-oligomeric Proteins
Descriptor: SG135
Authors:Gerben, S, Borst, A.J, Baker, D.
Deposit date:2022-08-19
Release date:2023-01-25
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.85 Å)
Cite:Design of Diverse Asymmetric Pockets in De Novo Homo-oligomeric Proteins.
Biochemistry, 62, 2023
8E1E
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BU of 8e1e by Molmil
Scaffolding protein functional sites using deep learning
Descriptor: SG122_C3
Authors:Bera, A.K, Gerben, S, Baker, D.
Deposit date:2022-08-10
Release date:2023-08-16
Method:X-RAY DIFFRACTION (4.27 Å)
Cite:Design of Diverse Asymmetric Pockets in De Novo Homo-oligomeric Proteins.
Biochemistry, 62, 2023
8EK4
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BU of 8ek4 by Molmil
De novo designed ice-binding proteins from twist-constrained helices
Descriptor: Ice-binding protein TIP-99a
Authors:Bera, A.K, De Haas, R.J.
Deposit date:2022-09-19
Release date:2023-07-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:De novo designed ice-binding proteins from twist-constrained helices.
Proc.Natl.Acad.Sci.USA, 120, 2023
8ERW
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BU of 8erw by Molmil
Precisely patterned nanofibers made from extendable protein multiplexes
Descriptor: C2HR4_8r
Authors:Bick, M.J, Parmeggiani, F, Bethel, N.P, Sankaran, B, Baker, D.
Deposit date:2022-10-12
Release date:2023-08-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Precisely patterned nanofibres made from extendable protein multiplexes.
Nat.Chem., 15, 2023
8EOV
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BU of 8eov by Molmil
Precisely patterned nanofibers made from extendable protein multiplexes
Descriptor: C2HR1_4r, PHOSPHATE ION
Authors:Bera, A.K, Bethel, N.P.
Deposit date:2022-10-04
Release date:2023-08-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Precisely patterned nanofibres made from extendable protein multiplexes.
Nat.Chem., 15, 2023
8EOX
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BU of 8eox by Molmil
Precisely patterned nanofibers made from extendable protein multiplexes
Descriptor: C4HR1_4r
Authors:Bera, A.K, Bethel, N.P.
Deposit date:2022-10-04
Release date:2023-08-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Precisely patterned nanofibres made from extendable protein multiplexes.
Nat.Chem., 15, 2023
8FIH
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BU of 8fih by Molmil
Multi-state design of two-state switchable hinge proteins
Descriptor: 3hb05, PHOSPHATE ION
Authors:Bera, A.K, Broerman, A, Baker, D.
Deposit date:2022-12-16
Release date:2023-08-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Design of stimulus-responsive two-state hinge proteins.
Science, 381, 2023
8FIT
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BU of 8fit by Molmil
Multi-state design of two-state switchable hinge proteins
Descriptor: cs074A
Authors:Bera, A.K, Praetorius, F, Baker, D.
Deposit date:2022-12-16
Release date:2023-08-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Design of stimulus-responsive two-state hinge proteins.
Science, 381, 2023
8FIN
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BU of 8fin by Molmil
Multi-state design of two-state switchable hinge proteins
Descriptor: cs207A
Authors:Bera, A.K, Leung, P.J.Y, Baker, D.
Deposit date:2022-12-16
Release date:2023-08-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Design of stimulus-responsive two-state hinge proteins.
Science, 381, 2023
8FAR
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BU of 8far by Molmil
Accurate computational design of genetically encoded 3D protein crystals
Descriptor: I432-1-CC
Authors:Bera, A.K, Li, Z, Baker, D.
Deposit date:2022-11-28
Release date:2023-11-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.66 Å)
Cite:Accurate computational design of three-dimensional protein crystals.
Nat Mater, 22, 2023
8FIQ
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BU of 8fiq by Molmil
Multi-state design of two-state switchable hinge proteins
Descriptor: cs207AB
Authors:Bera, A.K, Leung, P.J.Y, Baker, D.
Deposit date:2022-12-16
Release date:2023-08-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Design of stimulus-responsive two-state hinge proteins.
Science, 381, 2023
8FVT
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BU of 8fvt by Molmil
Multi-state design of two-state switchable hinge proteins
Descriptor: 3hb12
Authors:Bera, A.K, Broerman, A, Baker, D.
Deposit date:2023-01-19
Release date:2023-08-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Design of stimulus-responsive two-state hinge proteins.
Science, 381, 2023
8FBO
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BU of 8fbo by Molmil
Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains
Descriptor: KWOCA_102
Authors:Wang, J.Y, Khmelinskaia, A, Bera, A.K, King, N.P.
Deposit date:2022-11-29
Release date:2023-03-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FBJ
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BU of 8fbj by Molmil
Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains
Descriptor: KWOCA_60
Authors:Wang, J.Y, Khmelinskaia, A, Bera, A.K, King, N.P.
Deposit date:2022-11-29
Release date:2023-03-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FBN
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BU of 8fbn by Molmil
Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains
Descriptor: KWOCA_73
Authors:Wang, J.Y, Khmelinskaia, A, Bera, A.K, King, N.P.
Deposit date:2022-11-29
Release date:2023-03-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.04 Å)
Cite:Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains.
Proc.Natl.Acad.Sci.USA, 120, 2023

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