Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4RUD
DownloadVisualize
BU of 4rud by Molmil
Crystal structure of a three finger toxin
Descriptor: Three-finger toxin 3b, ZINC ION
Authors:Jobichen, C, Sivaraman, J.
Deposit date:2014-11-18
Release date:2016-05-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Fulditoxin, representing a new class of dimeric snake toxins, defines novel pharmacology at nicotinic ACh receptors.
Br.J.Pharmacol., 177, 2020
7C28
DownloadVisualize
BU of 7c28 by Molmil
Unusual quaternary structure of a homodimeric synergistic toxin from mamba snake venom
Descriptor: SULFATE ION, Synergistic-type venom protein S2C4
Authors:Jobichen, C, Narumi, A, Sivaraman, J, Kini, R.M.
Deposit date:2020-05-07
Release date:2020-10-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Unusual quaternary structure of a homodimeric synergistic-type toxin from mamba snake venom defines its molecular evolution.
Biochem.J., 477, 2020
4ZQY
DownloadVisualize
BU of 4zqy by Molmil
Ringhalexin from hemachatus haemachatus: A novel inhibitor of extrinsic tenase complex
Descriptor: Ringhalexin
Authors:Jobichen, C, Sivaraman, J.
Deposit date:2015-05-11
Release date:2016-05-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.9515 Å)
Cite:Ringhalexin from Hemachatus haemachatus: A novel inhibitor of extrinsic tenase complex.
Sci Rep, 6, 2016
3TVD
DownloadVisualize
BU of 3tvd by Molmil
Crystal Structure of Mouse RhoA-GTP complex
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, Transforming protein RhoA
Authors:Swaminathan, K, Pal, K, Jobichen, C.
Deposit date:2011-09-20
Release date:2012-10-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.989 Å)
Cite:Crystal structure of mouse RhoA:GTPgammaS complex in a centered lattice.
J.Struct.Funct.Genom., 13, 2012
3VTS
DownloadVisualize
BU of 3vts by Molmil
Crystal structure of a three finger toxin from snake venom
Descriptor: Cytotoxin 1
Authors:Jobichen, C, Sivaraman, J.
Deposit date:2012-06-06
Release date:2012-11-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.426 Å)
Cite:Identification and structural characterization of a new three-finger toxin hemachatoxin from Hemachatus haemachatus venom.
Plos One, 7, 2012
3WX6
DownloadVisualize
BU of 3wx6 by Molmil
Crystal structure of Type Six Secretion System protein
Descriptor: Uncharacterized protein
Authors:Jobichen, C, Sivaraman, J.
Deposit date:2014-07-17
Release date:2015-03-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Extended Loop Region of Hcp1 is Critical for the Assembly and Function of Type VI Secretion System in Burkholderia pseudomallei.
Sci Rep, 5, 2015
6A2V
DownloadVisualize
BU of 6a2v by Molmil
Crystal structure of Hcp protein
Descriptor: Type VI secretion system tube protein Hcp
Authors:Jobichen, C, Sivaraman, J.
Deposit date:2018-06-13
Release date:2018-09-19
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.588 Å)
Cite:Structural basis for the pathogenesis of Campylobacter jejuni Hcp1, a structural and effector protein of the Type VI Secretion System.
FEBS J., 285, 2018
7DEY
DownloadVisualize
BU of 7dey by Molmil
Structure of Dicer from Pichia stipitis
Descriptor: RNase III
Authors:Jobichen, C, Jingru, C.
Deposit date:2020-11-05
Release date:2021-05-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.897 Å)
Cite:Structural and mechanistic insight into stem-loop RNA processing by yeast Pichia stipitis Dicer.
Protein Sci., 30, 2021
5XWR
DownloadVisualize
BU of 5xwr by Molmil
Crystal Structure of RBBP4-peptide complex
Descriptor: Histone-binding protein RBBP4, MET-SER-ARG-ARG-LYS-GLN-ALA-LYS-PRO-GLN-HIS-ILE
Authors:Jobichen, C, Lui, B.H, Daniel, G.T, Sivaraman, J.
Deposit date:2017-06-30
Release date:2018-07-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Targeting cancer addiction for SALL4 by shifting its transcriptome with a pharmacologic peptide.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7FCF
DownloadVisualize
BU of 7fcf by Molmil
Crystal structure of T6SS Hcp protein
Descriptor: Fimbrial protein
Authors:Jobichen, C, Sivaraman, J.
Deposit date:2021-07-14
Release date:2022-07-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Bacterial antagonism of Chromobacterium haemolyticum and characterization of its putative type VI secretion system.
Res.Microbiol., 173, 2022
6KOR
DownloadVisualize
BU of 6kor by Molmil
Crystal structure of the RRM domain of SYNCRIP
Descriptor: Heterogeneous nuclear ribonucleoprotein Q
Authors:Chen, Y, Chan, J, Chen, W, Jobichen, C.
Deposit date:2019-08-12
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.602 Å)
Cite:SYNCRIP, a new player in pri-let-7a processing.
Rna, 26, 2020
5E38
DownloadVisualize
BU of 5e38 by Molmil
Structural basis of mapping the spontaneous mutations with 5-flourouracil in uracil phosphoribosyltransferase from Mycobacterium tuberculosis
Descriptor: Uracil phosphoribosyltransferase
Authors:Ghode, P, Jobichen, C, Ramachandran, S, Bifani, P, Sivaraman, J.
Deposit date:2015-10-02
Release date:2015-10-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis of mapping the spontaneous mutations with 5-flurouracil in uracil phosphoribosyltransferase from Mycobacterium tuberculosis
Biochem.Biophys.Res.Commun., 467, 2015
4KT5
DownloadVisualize
BU of 4kt5 by Molmil
Structure of GrlR-GrlA complex
Descriptor: GrlA, GrlR, TETRAETHYLENE GLYCOL
Authors:Padavannil, A, Jobichen, C, Sivaraman, J.
Deposit date:2013-05-20
Release date:2013-10-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of GrlR-GrlA complex that prevents GrlA activation of virulence genes
Nat Commun, 4, 2013
4NQF
DownloadVisualize
BU of 4nqf by Molmil
Crystal structure of HEPN domain protein
Descriptor: Nucleotidyltransferase
Authors:Padavannil, A, Jobichen, C, Sivaraman, J.
Deposit date:2013-11-25
Release date:2014-03-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Dimerization of VirD2 Binding Protein Is Essential for Agrobacterium Induced Tumor Formation in Plants
Plos Pathog., 10, 2014
3WXX
DownloadVisualize
BU of 3wxx by Molmil
Crystal Structure of a T3SS complex from Aeromonas hydrophila
Descriptor: AcrH, AopB, MAGNESIUM ION
Authors:Nguyen, V.S, Jobichen, C, Sivaraman, J, Henry, Y.K.M.
Deposit date:2014-08-12
Release date:2015-10-14
Last modified:2015-11-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of AcrH-AopB Chaperone-Translocator Complex Reveals a Role for Membrane Hairpins in Type III Secretion System Translocon Assembly
Structure, 23, 2015
5BN4
DownloadVisualize
BU of 5bn4 by Molmil
Structure of a unique ATP synthase NeqA-NeqB in complex with ANP from Nanoarcheaum equitans
Descriptor: MAGNESIUM ION, NEQ263, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Mohanty, S, Jobichen, C, Chichili, V.P.R, Sivaraman, J.
Deposit date:2015-05-25
Release date:2015-09-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.699 Å)
Cite:Structural Basis for a Unique ATP Synthase Core Complex from Nanoarcheaum equitans
J.Biol.Chem., 290, 2015
5BN3
DownloadVisualize
BU of 5bn3 by Molmil
Structure of a unique ATP synthase NeqA-NeqB in complex with ADP from Nanoarcheaum equitans
Descriptor: 1,4-DIETHYLENE DIOXIDE, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
Authors:Mohanty, S, Jobichen, C, Chichili, V.P.R, Sivaraman, J.
Deposit date:2015-05-25
Release date:2015-09-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for a Unique ATP Synthase Core Complex from Nanoarcheaum equitans
J.Biol.Chem., 290, 2015
5BO5
DownloadVisualize
BU of 5bo5 by Molmil
Structure of a unique ATP synthase subunit NeqB from Nanoarcheaum equitans
Descriptor: MAGNESIUM ION, NEQ263, SULFATE ION
Authors:Mohanty, S, Jobichen, C, Chichili, V.P.R, Sivaraman, J.
Deposit date:2015-05-27
Release date:2015-09-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.808 Å)
Cite:Structural Basis for a Unique ATP Synthase Core Complex from Nanoarcheaum equitans
J.Biol.Chem., 290, 2015
5BN5
DownloadVisualize
BU of 5bn5 by Molmil
Structural basis for a unique ATP synthase core complex from Nanoarcheaum equitans
Descriptor: NEQ263, SULFATE ION, V-type ATP synthase alpha chain
Authors:Mohanty, S, Jobichen, C, Chichili, V.P.R, Sivaraman, J.
Deposit date:2015-05-25
Release date:2015-09-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.997 Å)
Cite:Structural Basis for a Unique ATP Synthase Core Complex from Nanoarcheaum equitans
J.Biol.Chem., 290, 2015
8H9D
DownloadVisualize
BU of 8h9d by Molmil
Crystal structure of Cas12a protein
Descriptor: Cas12A, MAGNESIUM ION, RNA (5'-R(P*AP*AP*UP*UP*UP*CP*UP*AP*CP*UP*AP*AP*GP*UP*GP*UP*AP*GP*AP*UP*C)-3'), ...
Authors:Jianwei, L, Jobichen, C, Sivaraman, J.
Deposit date:2022-10-25
Release date:2023-02-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of apo Cas12a and its complex with crRNA and DNA reveal the dynamics of ternary complex formation and target DNA cleavage.
Plos Biol., 21, 2023
8GWR
DownloadVisualize
BU of 8gwr by Molmil
Near full length Kidney type Glutaminase in complex with 2,2-Dimethyl-2,3-Dihydrobenzo[a] Phenanthridin-4(1H)-one (DDP)
Descriptor: 2,2-dimethyl-1,3-dihydrobenzo[a]phenanthridin-4-one, Glutaminase kidney isoform, mitochondrial
Authors:Shankar, S, Jobichen, C, Sivaraman, J.
Deposit date:2022-09-17
Release date:2022-12-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:A novel allosteric site employs a conserved inhibition mechanism in human kidney-type glutaminase.
Febs J., 290, 2023
7E0W
DownloadVisualize
BU of 7e0w by Molmil
Crystal Structure of BCH domain from S. pombe
Descriptor: Putative Rho GTPase-activating protein C1565.02c, TETRAETHYLENE GLYCOL
Authors:Chichili, V.P.R, Jobichen, C, Sivaraman, J.
Deposit date:2021-01-28
Release date:2021-03-31
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A novel intertwined anti-parallel dimeric structure of scaffold BCH domain regulates RhoA and RhoGAP functions
Proc.Natl.Acad.Sci.USA, 2021
7E4V
DownloadVisualize
BU of 7e4v by Molmil
Crystal structure of mosquito Staufen dsRNA binding domain 4
Descriptor: GLYCEROL, Staufen
Authors:Gayathiri, S.K, Jobichen, C, Mok, Y.K.
Deposit date:2021-02-15
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Crystal structure of mosquito Staufen dsRNA binding domain 4
To Be Published
7E4U
DownloadVisualize
BU of 7e4u by Molmil
Crystal structure of Peroxiredoxin-1
Descriptor: CALCIUM ION, GLYCEROL, Peroxiredoxin 1
Authors:Ahmed, S, Mok, Y.K, Jobichen, C.
Deposit date:2021-02-15
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of Peroxiredoxin-1
To Be Published
7E50
DownloadVisualize
BU of 7e50 by Molmil
Crystal structure of human microplasmin in complex with kazal-type inhibitor AaTI
Descriptor: AAEL006007-PA, GLYCEROL, Plasminogen, ...
Authors:Varsha, A.W, Jobichen, C, Mok, Y.K.
Deposit date:2021-02-16
Release date:2022-02-16
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of Aedes aegypti trypsin inhibitor in complex with mu-plasmin reveals role for scaffold stability in Kazal-type serine protease inhibitor.
Protein Sci., 31, 2022

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon