Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5BZ3
DownloadVisualize
BU of 5bz3 by Molmil
CRYSTAL STRUCTURE OF SODIUM PROTON ANTIPORTER NAPA IN OUTWARD-FACING CONFORMATION.
Descriptor: (2R)-2,3-DIHYDROXYPROPYL (7Z)-TETRADEC-7-ENOATE, Na(+)/H(+) antiporter
Authors:Coincon, M, Uzdavinys, P, Emmanuel, N, Cameron, A, Drew, D.
Deposit date:2015-06-11
Release date:2016-01-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures reveal the molecular basis of ion translocation in sodium/proton antiporters.
Nat.Struct.Mol.Biol., 23, 2016
5BZ2
DownloadVisualize
BU of 5bz2 by Molmil
CRYSTAL STRUCTURE OF THE SODIUM PROTON ANTIPORTER NAPA IN INWARD-FACING CONFORMATION
Descriptor: Na(+)/H(+) antiporter
Authors:Coincon, M, Uzdavinys, P, Cameron, A, Drew, D.
Deposit date:2015-06-11
Release date:2016-01-20
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Crystal structures reveal the molecular basis of ion translocation in sodium/proton antiporters.
Nat.Struct.Mol.Biol., 23, 2016
4B5X
DownloadVisualize
BU of 4b5x by Molmil
Crystal structures of divalent metal dependent pyruvate aldolase (HpaI), mutant D42A
Descriptor: 4-HYDROXY-2-OXO-HEPTANE-1,7-DIOATE ALDOLASE, GLYCEROL, PHOSPHATE ION
Authors:Coincon, M, Wang, W, Seah, S.Y.K, Sygusch, J.
Deposit date:2012-08-07
Release date:2012-08-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Reaction Intermediates in Pyruvate Class II Aldolase: Substrate Cleavage, Enolate Stabilization and Substrate Specificity
J.Biol.Chem., 287, 2012
4B5T
DownloadVisualize
BU of 4b5t by Molmil
Crystal structures of divalent metal dependent pyruvate aldolase, HpaI, in complex with ketobutyrate
Descriptor: 2-KETOBUTYRIC ACID, 4-HYDROXY-2-OXO-HEPTANE-1,7-DIOATE ALDOLASE, COBALT (II) ION, ...
Authors:Coincon, M, Wang, W, Seah, S.Y.K, Sygusch, J.
Deposit date:2012-08-07
Release date:2012-08-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.923 Å)
Cite:Crystal Structure of Reaction Intermediates in Pyruvate Class II Aldolase: Substrate Cleavage, Enolate Stabilization and Substrate Specificity
J.Biol.Chem., 287, 2012
4B5V
DownloadVisualize
BU of 4b5v by Molmil
Crystal structures of divalent metal dependent pyruvate aldolase, HpaI, in complex with 4-hydroxyl-2-ketoheptane-1,7-dioate
Descriptor: (4R)-4-oxidanyl-2-oxidanylidene-heptanedioic acid, 4-HYDROXY-2-OXO-HEPTANE-1,7-DIOATE ALDOLASE, GLYCEROL, ...
Authors:Coincon, M, Wang, W, Seah, S.Y.K, Sygusch, J.
Deposit date:2012-08-07
Release date:2012-08-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.041 Å)
Cite:Crystal Structure of Reaction Intermediates in Pyruvate Class II Aldolase: Substrate Cleavage, Enolate Stabilization and Substrate Specificity
J.Biol.Chem., 287, 2012
4B5U
DownloadVisualize
BU of 4b5u by Molmil
Crystal structures of divalent metal dependent pyruvate aldolase, HpaI, in complex with pyruvate and succinic semialdehyde
Descriptor: 4-HYDROXY-2-OXO-HEPTANE-1,7-DIOATE ALDOLASE, 4-oxobutanoic acid, COBALT (II) ION, ...
Authors:Coincon, M, Wang, W, Seah, S.Y.K, Sygusch, J.
Deposit date:2012-08-07
Release date:2012-08-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.913 Å)
Cite:Crystal Structure of Reaction Intermediates in Pyruvate Class II Aldolase: Substrate Cleavage, Enolate Stabilization and Substrate Specificity
J.Biol.Chem., 287, 2012
4B5W
DownloadVisualize
BU of 4b5w by Molmil
Crystal structures of divalent metal dependent pyruvate aldolase R70A mutant, HpaI, in complex with pyruvate
Descriptor: 4-HYDROXY-2-OXO-HEPTANE-1,7-DIOATE ALDOLASE, CALCIUM ION, COBALT (II) ION, ...
Authors:Coincon, M, Wang, W, Seah, S.Y.K, Sygusch, J.
Deposit date:2012-08-07
Release date:2012-08-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.792 Å)
Cite:Crystal Structure of Reaction Intermediates in Pyruvate Class II Aldolase: Substrate Cleavage, Enolate Stabilization and Substrate Specificity
J.Biol.Chem., 287, 2012
4B5S
DownloadVisualize
BU of 4b5s by Molmil
Crystal structures of divalent metal dependent pyruvate aldolase, HpaI, in complex with pyruvate
Descriptor: 4-HYDROXY-2-OXO-HEPTANE-1,7-DIOATE ALDOLASE, COBALT (II) ION, D-Glyceraldehyde, ...
Authors:Coincon, M, Wang, W, Seah, S.Y.K, Sygusch, J.
Deposit date:2012-08-07
Release date:2012-08-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Crystal Structure of Reaction Intermediates in Pyruvate Class II Aldolase: Substrate Cleavage, Enolate Stabilization and Substrate Specificity
J.Biol.Chem., 287, 2012
3C4U
DownloadVisualize
BU of 3c4u by Molmil
Structure of class II fructose-biphosphate aldolase from helicobacter pylori
Descriptor: Fructose-bisphosphate aldolase, SODIUM ION, ZINC ION
Authors:Coincon, M, Sygusch, J.
Deposit date:2008-01-30
Release date:2008-08-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Synthesis and Biochemical Evaluation of Selective Inhibitors of Class II Fructose Bisphosphate Aldolases: Towards New Synthetic Antibiotics.
Chemistry, 14, 2008
3C56
DownloadVisualize
BU of 3c56 by Molmil
Class II fructose-1,6-bisphosphate aldolase from helicobacter pylori in complex with N-(3-Hydroxypropyl)-glycolohydroxamic acid bisphosphate, a competitive inhibitor
Descriptor: 3-{hydroxy[(phosphonooxy)acetyl]amino}propyl dihydrogen phosphate, Fructose-bisphosphate aldolase, ZINC ION
Authors:Coincon, M, Sygusch, J, Potvin-Dulude, P.
Deposit date:2008-01-30
Release date:2008-08-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Synthesis and Biochemical Evaluation of Selective Inhibitors of Class II Fructose Bisphosphate Aldolases: Towards New Synthetic Antibiotics.
Chemistry, 14, 2008
3C52
DownloadVisualize
BU of 3c52 by Molmil
Class II fructose-1,6-bisphosphate aldolase from helicobacter pylori in complex with phosphoglycolohydroxamic acid, a competitive inhibitor
Descriptor: CALCIUM ION, Fructose-bisphosphate aldolase, PHOSPHOGLYCOLOHYDROXAMIC ACID, ...
Authors:Coincon, M, Sygusch, J.
Deposit date:2008-01-30
Release date:2008-08-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Synthesis and Biochemical Evaluation of Selective Inhibitors of Class II Fructose Bisphosphate Aldolases: Towards New Synthetic Antibiotics.
Chemistry, 14, 2008
4A22
DownloadVisualize
BU of 4a22 by Molmil
Structure of Mycobacterium tuberculosis fructose 1,6-bisphosphate aldolase bound to N-(4-hydroxybutyl)- glycolohydroxamic acid bis- phosphate
Descriptor: 4-{hydroxy[(phosphonooxy)acetyl]amino}butyl dihydrogen phosphate, FRUCTOSE-BISPHOSPHATE ALDOLASE, SODIUM ION, ...
Authors:Coincon, M, De la Paz Santangelo, M, Gest, P.M, Guerin, M.E, Pham, H, Ryan, G, Puckett, S.E, Spencer, J.S, Gonzalez-Juarrero, M, Daher, R, Lenaerts, A.J, Schnappinger, D, Therisod, M, Ehrt, S, Jackson, M, Sygusch, J.
Deposit date:2011-09-21
Release date:2011-10-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Glycolytic and non-glycolytic functions of Mycobacterium tuberculosis fructose-1,6-bisphosphate aldolase, an essential enzyme produced by replicating and non-replicating bacilli.
J. Biol. Chem., 286, 2011
4A21
DownloadVisualize
BU of 4a21 by Molmil
Structure of Mycobacterium tuberculosis fructose 1,6-bisphosphate aldolase bound to sulfate
Descriptor: FRUCTOSE-BISPHOSPHATE ALDOLASE, SODIUM ION, SULFATE ION
Authors:Coincon, M, De la Paz Santangelo, M, Gest, P.M, Guerin, M.E, Pham, H, Ryan, G, Puckett, S.E, Spencer, J.S, Gonzalez-Juarrero, M, Daher, R, Lenaerts, A.J, Schnappinger, D, Therisod, M, Ehrt, S, Jackson, M, Sygusch, J.
Deposit date:2011-09-21
Release date:2011-10-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Glycolytic and Non-Glycolytic Functions of the Fructose-1,6-Bisphosphate Aldolase of Mycobacterium Tuberculosis, an Essential Enzyme Produced by Replicating and Non-Replicating Bacilli
J.Biol.Chem., 286, 2011
4AKZ
DownloadVisualize
BU of 4akz by Molmil
CRYSTAL STRUCTURE OF VIRB8 FROM BRUCELLA SUIS
Descriptor: TYPE IV SECRETION SYSTEM PROTEIN VIRB8
Authors:Coincon, M, Smith, M.A, Sygusch, J, Baron, C.
Deposit date:2012-02-29
Release date:2012-09-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Identification of the Binding Site of Brucella Virb8 Interaction Inhibitors.
Chem.Biol., 19, 2012
5VJE
DownloadVisualize
BU of 5vje by Molmil
Class II fructose-1,6-bisphosphate aldolase of Escherichia coli with D-glucitol 1,6-bisphosphate
Descriptor: D-Glucitol-1,6-bisphosphate, Fructose-bisphosphate aldolase class 2, SODIUM ION
Authors:Coincon, M, Sygusch, J.
Deposit date:2017-04-19
Release date:2018-04-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Active site remodeling during the catalytic cycle in metal-dependent fructose-1,6-bisphosphate aldolases.
J. Biol. Chem., 293, 2018
5VJF
DownloadVisualize
BU of 5vjf by Molmil
Class II fructose-1,6-bisphosphate aldolase of Helicobacter pylori with DHAP
Descriptor: 1,3-DIHYDROXYACETONEPHOSPHATE, CALCIUM ION, Fructose-bisphosphate aldolase, ...
Authors:Coincon, M, Sygusch, J.
Deposit date:2017-04-19
Release date:2018-04-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Active site remodeling during the catalytic cycle in metal-dependent fructose-1,6-bisphosphate aldolases.
J. Biol. Chem., 293, 2018
4AKY
DownloadVisualize
BU of 4aky by Molmil
CRYSTAL STRUCTURE OF VIRB8 FROM BRUCELLA SUIS IN COMPLEX WITH INTERACTION INHIBITOR 2-(butylamino)-8-quinolinol
Descriptor: 2-(butylamino)quinolin-8-ol, TYPE IV SECRETION SYSTEM PROTEIN VIRB8
Authors:Coincon, M, Smith, M.A, Sygusch, J, Baron, C.
Deposit date:2012-02-29
Release date:2012-09-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Identification of the Binding Site of Brucella Virb8 Interaction Inhibitors.
Chem.Biol., 19, 2012
6YMB
DownloadVisualize
BU of 6ymb by Molmil
MicroED structure of human carbonic anhydrase II
Descriptor: ZINC ION, carbonic anhydrase 2
Authors:Clabbers, M.T.B, Fisher, S.Z, Coincon, M, Zou, X, Xu, H.
Deposit date:2020-04-08
Release date:2020-08-12
Last modified:2024-01-24
Method:ELECTRON CRYSTALLOGRAPHY (2.5 Å)
Cite:Visualizing drug binding interactions using microcrystal electron diffraction.
Commun Biol, 3, 2020
6YMA
DownloadVisualize
BU of 6yma by Molmil
MicroED structure of acetazolamide-bound human carbonic anhydrase II
Descriptor: 5-ACETAMIDO-1,3,4-THIADIAZOLE-2-SULFONAMIDE, DIMETHYL SULFOXIDE, ZINC ION, ...
Authors:Clabbers, M.T.B, Fisher, S.Z, Coincon, M, Zou, X, Xu, H.
Deposit date:2020-04-08
Release date:2020-08-12
Last modified:2024-01-24
Method:ELECTRON CRYSTALLOGRAPHY (2.5 Å)
Cite:Visualizing drug binding interactions using microcrystal electron diffraction.
Commun Biol, 3, 2020
5TLQ
DownloadVisualize
BU of 5tlq by Molmil
Model structure of the oxidized PaDsbA1 and 3-[(2-methylbenzyl)sulfanyl]-4H-1,2,4-triazol-4-amine complex
Descriptor: 3-[(2-methylbenzyl)sulfanyl]-4H-1,2,4-triazol-4-amine, Thiol:disulfide interchange protein DsbA
Authors:Mohanty, B, Rimmer, K.A, McMahon, R.M, Headey, S.J, Vazirani, M, Shouldice, S.R, Coincon, M, Tay, S, Morton, C.J, Simpson, J.S, Martin, J.L, Scanlon, M.S.
Deposit date:2016-10-11
Release date:2017-04-12
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:Fragment library screening identifies hits that bind to the non-catalytic surface of Pseudomonas aeruginosa DsbA1.
PLoS ONE, 12, 2017
5VJD
DownloadVisualize
BU of 5vjd by Molmil
Class II fructose-1,6-bisphosphate aldolase of Escherichia coli with DHAP
Descriptor: 1,3-DIHYDROXYACETONEPHOSPHATE, Fructose-bisphosphate aldolase class 2, SODIUM ION, ...
Authors:Sygusch, J, Coincon, M.
Deposit date:2017-04-19
Release date:2018-04-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Active site remodeling during the catalytic cycle in metal-dependent fructose-1,6-bisphosphate aldolases.
J. Biol. Chem., 293, 2018
3N9R
DownloadVisualize
BU of 3n9r by Molmil
Class II fructose-1,6-bisphosphate aldolase from helicobacter pylori in complex with N-(4-hydroxybutyl)-phosphoglycolohydroxamic acid, a competitive inhibitor
Descriptor: 2-[hydroxy(4-hydroxybutyl)amino]-2-oxoethyl dihydrogen phosphate, CHLORIDE ION, Fructose-bisphosphate aldolase, ...
Authors:Coincon, M, Sygusch, S.
Deposit date:2010-05-31
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Rational Design, Synthesis, and Evaluation of New Selective Inhibitors of Microbial Class II (Zinc Dependent) Fructose Bis-phosphate Aldolases.
J.Med.Chem., 53, 2010
3N9S
DownloadVisualize
BU of 3n9s by Molmil
Class II fructose-1,6-bisphosphate aldolase from helicobacter pylori in complex with N-(4-hydroxybutyl)- glycolohydroxamic acid bis-phosphate, a competitive inhibitor
Descriptor: 4-{hydroxy[(phosphonooxy)acetyl]amino}butyl dihydrogen phosphate, CALCIUM ION, Fructose-bisphosphate aldolase, ...
Authors:Coincon, M, Sygusch, S.
Deposit date:2010-05-31
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Rational Design, Synthesis, and Evaluation of New Selective Inhibitors of Microbial Class II (Zinc Dependent) Fructose Bis-phosphate Aldolases.
J.Med.Chem., 53, 2010
2MBT
DownloadVisualize
BU of 2mbt by Molmil
NMR study of PaDsbA
Descriptor: Thiol:disulfide interchange protein DsbA
Authors:Rimmer, K, Mohanty, B, Scanlon, M.J.
Deposit date:2013-08-03
Release date:2014-11-12
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Fragment library screening identifies hits that bind to the non-catalytic surface of Pseudomonas aeruginosa DsbA1.
PLoS ONE, 12, 2017
5DCH
DownloadVisualize
BU of 5dch by Molmil
Crystal structure of Pseudomonas aeruginosa DsbA E82I in complex with MIPS-0000851 (3-[(2-METHYLBENZYL)SULFANYL]-4H-1,2,4-TRIAZOL-4-AMINE)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[(2-methylbenzyl)sulfanyl]-4H-1,2,4-triazol-4-amine, GLYCEROL, ...
Authors:McMahon, R.M, Martin, J.L.
Deposit date:2015-08-24
Release date:2016-10-05
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.447 Å)
Cite:Fragment library screening identifies hits that bind to the non-catalytic surface of Pseudomonas aeruginosa DsbA1.
PLoS ONE, 12, 2017

 

12>

227111

數據於2024-11-06公開中

PDB statisticsPDBj update infoContact PDBjnumon