Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1NQU
DownloadVisualize
BU of 1nqu by Molmil
Crystal Structure of Lumazine Synthase from Aquifex aeolicus in Complex with Inhibitor: 6,7-dioxo-5H-8-ribitylaminolumazine
Descriptor: 6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE, 6,7-dimethyl-8-ribityllumazine synthase, PHOSPHATE ION
Authors:Zhang, X, Meining, W, Cushman, M, Haase, I, Fischer, M, Bacher, A, Ladenstein, R.
Deposit date:2003-01-23
Release date:2004-01-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A structure-based model of the reaction catalyzed by lumazine synthase from Aquifex aeolicus.
J.Mol.Biol., 328, 2003
1NQV
DownloadVisualize
BU of 1nqv by Molmil
Crystal Structure of Lumazine Synthase from Aquifex aeolicus in Complex with Inhibitor: 5-nitroso-6-ribityl-amino-2,4(1H,3H)pyrimidinedione
Descriptor: 5-NITROSO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE, 6,7-dimethyl-8-ribityllumazine synthase, PHOSPHATE ION
Authors:Zhang, X, Meining, W, Cushman, M, Haase, I, Fischer, M, Bacher, A, Ladenstein, R.
Deposit date:2003-01-23
Release date:2004-01-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:A structure-based model of the reaction catalyzed by lumazine synthase from Aquifex aeolicus.
J.Mol.Biol., 328, 2003
2MX6
DownloadVisualize
BU of 2mx6 by Molmil
Complex structure of Dvl PDZ domain with ligand
Descriptor: (PHQ)WV peptide, Segment polarity protein dishevelled homolog DVL-1
Authors:Zhang, X, Zheng, J.J.
Deposit date:2014-12-15
Release date:2015-12-30
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Protein-ligand interaction decoded by NMR chemical shift analysis
To be Published
2B5X
DownloadVisualize
BU of 2b5x by Molmil
Solution Structure of a Thioredoxin-like Protein in the Reduced Form
Descriptor: YkuV protein
Authors:Zhang, X, Xia, B, Jin, C.
Deposit date:2005-09-29
Release date:2006-01-17
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The bacillus subtilis YKUV is a thiol-disulfide oxidoreductase revealed by its redox structures and activity
J.Biol.Chem., 281, 2006
2CSE
DownloadVisualize
BU of 2cse by Molmil
Features of Reovirus Outer-Capsid Protein mu1 Revealed by Electron and Image Reconstruction of the virion at 7.0-A Resolution
Descriptor: Minor core protein lambda 3, Sigma 2 protein, guanylyltransferase, ...
Authors:Zhang, X, Ji, Y, Zhang, L, Harrison, S.C, Marinescu, D.C, Nibert, M.L, Baker, T.S.
Deposit date:2005-05-21
Release date:2005-10-18
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Features of reovirus outer capsid protein mu1 revealed by electron cryomicroscopy and image reconstruction of the virion at 7.0 Angstrom resolution.
Structure, 13, 2005
2P0Q
DownloadVisualize
BU of 2p0q by Molmil
Calcium binding protein in the calcium-binding form
Descriptor: Alr1010 protein
Authors:Zhang, X, Hu, Y, Jin, C.
Deposit date:2007-03-01
Release date:2008-03-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structures of Ccbp from Anabaena Reveals a New Fold and Novel Calcium Binding Sites
To be Published
3OJI
DownloadVisualize
BU of 3oji by Molmil
X-ray crystal structure of the Py13 -pyrabactin complex
Descriptor: 4-bromo-N-(pyridin-2-ylmethyl)naphthalene-1-sulfonamide, Abscisic acid receptor PYL3, SULFATE ION
Authors:Zhang, X, Zhang, Q, Wang, G, Chen, Z.
Deposit date:2010-08-23
Release date:2011-08-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Complex Structures of the Abscisic Acid Receptor PYL3/RCAR13 Reveal a Unique Regulatory Mechanism
Structure, 20, 2012
8WRR
DownloadVisualize
BU of 8wrr by Molmil
Cryo-EM structure of Cas12-1 with 10 nt complementary heteroduplex
Descriptor: Cryo-EM structure of Cas12-1 with 5 nt complementary heteroduplex, NTS, RNA (39-MER), ...
Authors:Zhang, X, Zhang, K.
Deposit date:2023-10-16
Release date:2025-04-16
Last modified:2025-06-18
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structure of Cas12-1 with 10 nt complementary heteroduplex
To Be Published
9HBQ
DownloadVisualize
BU of 9hbq by Molmil
SARS-CoV-2 Main Protease complexed with (1R)-N-(3-chlorophenyl)-3-oxo-indane-1-carboxamide
Descriptor: (1~{R})-~{N}-(3-chlorophenyl)-3-oxidanylidene-1,2-dihydroindene-1-carboxamide, 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, ...
Authors:Hanoulle, X, Charton, J, Deprez, B.
Deposit date:2024-11-08
Release date:2024-11-27
Method:X-RAY DIFFRACTION (1.795 Å)
Cite:SARS-CoV-2 Main Protease complexed with (1R)-N-(3-chlorophenyl)-3-oxo-indane-1-carboxamide
To Be Published
9HDN
DownloadVisualize
BU of 9hdn by Molmil
SARS-CoV-2 Main Protease in complex with (1R)-3-oxo-N-[2-oxo-2-(N-phenylanilino)ethyl]indane-1-carboxamide
Descriptor: (1~{R})-~{N}-[2-(diphenylamino)-2-oxidanylidene-ethyl]-3-oxidanylidene-1,2-dihydroindene-1-carboxamide, 3C-like proteinase nsp5
Authors:Hanoulle, X, Charton, J, Deprez, B.
Deposit date:2024-11-12
Release date:2024-11-27
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:SARS-CoV-2 Main Protease in complex with (1R)-3-oxo-N-[2-oxo-2-(N-phenylanilino)ethyl]indane-1-carboxamide
To Be Published
9HDC
DownloadVisualize
BU of 9hdc by Molmil
SARS-CoV-2 Main Protease in complex with (3S)-3-[(3R)-3-phenylpiperidine-1-carbonyl]indan-1-one
Descriptor: (3~{S})-3-[(3~{R})-3-phenylpiperidin-1-yl]carbonyl-2,3-dihydroinden-1-one, 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, ...
Authors:Hanoulle, X, Charton, J, Deprez, B.
Deposit date:2024-11-12
Release date:2024-11-27
Method:X-RAY DIFFRACTION (1.794 Å)
Cite:SARS-CoV-2 Main Protease in complex with (3S)-3-[(3R)-3-phenylpiperidine-1-carbonyl]indan-1-one
To Be Published
5HWL
DownloadVisualize
BU of 5hwl by Molmil
Human glutathione s-transferase Mu2 complexed with BDEA, monoclinic crystal form
Descriptor: GLUTATHIONE, Glutathione S-transferase Mu 2, N,N'-(butane-1,4-diyl)bis{2-[2,3-dichloro-4-(2-methylidenebutanoyl)phenoxy]acetamide}
Authors:Zhang, X, Wei, J, Wu, S, Zhang, H.P, Luo, M, Yang, X.L, Liao, F, Wang, D.Q.
Deposit date:2016-01-29
Release date:2017-11-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Human glutathione s-transferase Mu2 complexed with BDEA, monoclinic crystal form
To Be Published
9HD8
DownloadVisualize
BU of 9hd8 by Molmil
SARS-CoV-2 Main Protease in complex with with (1R)-N-(3-chlorophenyl)-N-[4-(2,4-dioxo-1H-pyrimidin-5-yl)phenyl]-3-oxo-indane-1-carboxamide
Descriptor: (1~{R})-~{N}-[4-[2,4-bis(oxidanylidene)-1~{H}-pyrimidin-5-yl]phenyl]-~{N}-(3-chlorophenyl)-3-oxidanylidene-1,2-dihydroindene-1-carboxamide, 3C-like proteinase nsp5, SODIUM ION
Authors:Hanoulle, X, Charton, J, Deprez, B.
Deposit date:2024-11-12
Release date:2024-11-27
Method:X-RAY DIFFRACTION (1.696 Å)
Cite:SARS-CoV-2 Main Protease in complex with with (1R)-N-(3-chlorophenyl)-N-[4-(2,4-dioxo-1H-pyrimidin-5-yl)phenyl]-3-oxo-indane-1-carboxamide
To Be Published
9HC1
DownloadVisualize
BU of 9hc1 by Molmil
SARS-CoV-2 Main Protease complexed with (1R)-N-(3-chlorophenyl)-3-oxo-N-[4-(2-oxopyrrolidin-1-yl)phenyl]indane-1-carboxamide
Descriptor: (1~{R})-~{N}-(3-chlorophenyl)-3-oxidanylidene-~{N}-[4-(2-oxidanylidenepyrrolidin-1-yl)phenyl]-1,2-dihydroindene-1-carboxamide, 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, ...
Authors:Hanoulle, X, Charton, J, Deprez, B.
Deposit date:2024-11-08
Release date:2024-11-27
Method:X-RAY DIFFRACTION (1.493 Å)
Cite:SARS-CoV-2 Main Protease complexed with (1R)-N-(3-chlorophenyl)-3-oxo-N-[4-(2-oxopyrrolidin-1-yl)phenyl]indane-1-carboxamide
To Be Published
9HDJ
DownloadVisualize
BU of 9hdj by Molmil
SARS-CoV-2 Main Protease in complex with (3R)-3-[(3R)-4-benzyl-3-phenyl-piperidine-1-carbonyl]indan-1-one
Descriptor: (3~{R})-3-[(3~{R})-3-phenyl-4-(phenylmethyl)piperazin-1-yl]carbonyl-2,3-dihydroinden-1-one, 3C-like proteinase nsp5, FORMIC ACID
Authors:Hanoulle, X, Charton, J, Deprez, B.
Deposit date:2024-11-12
Release date:2024-11-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:SARS-CoV-2 Main Protease in complex with (3R)-3-[(3R)-4-benzyl-3-phenyl-piperidine-1-carbonyl]indan-1-one
To Be Published
7XGD
DownloadVisualize
BU of 7xgd by Molmil
Cryo-EM structure of Apo-IGF1R map 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Insulin-like growth factor 1 receptor
Authors:Zhang, X, Wu, C.
Deposit date:2022-04-04
Release date:2023-04-12
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Cryo-EM structure of Apo-IGF1R
To Be Published
3IYL
DownloadVisualize
BU of 3iyl by Molmil
Atomic CryoEM Structure of a Nonenveloped Virus Suggests How Membrane Penetration Protein is Primed for Cell Entry
Descriptor: Core protein VP6, MYRISTIC ACID, Outer capsid VP4, ...
Authors:Zhang, X, Jin, L, Fang, Q, Hui, W, Zhou, Z.H.
Deposit date:2010-02-02
Release date:2010-05-12
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:3.3 A cryo-EM structure of a nonenveloped virus reveals a priming mechanism for cell entry.
Cell(Cambridge,Mass.), 141, 2010
9AST
DownloadVisualize
BU of 9ast by Molmil
Cryo-EM structure of XCR1 signaling complex
Descriptor: Chemokine XC receptor 1,Non structural polyprotein, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Zhang, X, Zhang, C.
Deposit date:2024-02-26
Release date:2024-12-11
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Molecular basis for chemokine recognition and activation of XCR1.
Proc.Natl.Acad.Sci.USA, 121, 2024
2RFD
DownloadVisualize
BU of 2rfd by Molmil
Crystal structure of the complex between the EGFR kinase domain and a Mig6 peptide
Descriptor: ERBB receptor feedback inhibitor 1, Epidermal growth factor receptor, SULFATE ION
Authors:Zhang, X, Pickin, K.A, Bose, R, Jura, N, Cole, P.A, Kuriyan, J.
Deposit date:2007-09-28
Release date:2007-12-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Inhibition of the EGF receptor by binding of MIG6 to an activating kinase domain interface.
Nature, 450, 2007
2RF9
DownloadVisualize
BU of 2rf9 by Molmil
Crystal structure of the complex between the EGFR kinase domain and a Mig6 peptide
Descriptor: ERBB receptor feedback inhibitor 1, Epidermal growth factor receptor
Authors:Zhang, X, Pickin, K.A, Bose, R, Jura, N, Cole, P.A, Kuriyan, J.
Deposit date:2007-09-28
Release date:2007-12-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Inhibition of the EGF receptor by binding of MIG6 to an activating kinase domain interface.
Nature, 450, 2007
2RFE
DownloadVisualize
BU of 2rfe by Molmil
Crystal structure of the complex between the EGFR kinase domain and a Mig6 peptide
Descriptor: ERBB receptor feedback inhibitor 1, Epidermal growth factor receptor
Authors:Zhang, X, Pickin, K.A, Bose, R, Jura, N, Cole, P.A, Kuriyan, J.
Deposit date:2007-09-28
Release date:2007-12-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Inhibition of the EGF receptor by binding of MIG6 to an activating kinase domain interface.
Nature, 450, 2007
3J4U
DownloadVisualize
BU of 3j4u by Molmil
A new topology of the HK97-like fold revealed in Bordetella bacteriophage: non-covalent chainmail secured by jellyrolls
Descriptor: cementing protein, major capsid protein
Authors:Zhang, X, Guo, H, Jin, L, Czornyj, E, Hodes, A, Hui, W.H, Nieh, A.W, Miller, J.F, Zhou, Z.H.
Deposit date:2013-10-09
Release date:2013-12-25
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:A new topology of the HK97-like fold revealed in Bordetella bacteriophage by cryoEM at 3.5 A resolution.
Elife, 2, 2013
1UON
DownloadVisualize
BU of 1uon by Molmil
REOVIRUS POLYMERASE LAMBDA-3 LOCALIZED BY ELECTRON CRYOMICROSCOPY OF VIRIONS AT 7.6-A RESOLUTION
Descriptor: 3'-DEOXY-CYTIDINE-5'-TRIPHOSPHATE, 5'-R(*GP*GP*GP*GP*GP*)-3', 5'-R(*UP*AP*GP*CP*CP*CP*CP*CP*)-3', ...
Authors:Zhang, X, Walker, S.B, Chipman, P.R, Nibert, M.L, Baker, T.S.
Deposit date:2003-09-21
Release date:2003-11-13
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (7.6 Å)
Cite:Reovirus Polymerase Lambda3 Localized by Cryo-Electron Microscopy of Virions at a Resolution of 7.6 A
Nat.Struct.Biol., 10, 2003
2P0P
DownloadVisualize
BU of 2p0p by Molmil
Calcium binding protein in the free form
Descriptor: Alr1010 protein
Authors:Zhang, X, Hu, Y, Jin, C.
Deposit date:2007-02-28
Release date:2008-03-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structures of Ccbp from Anabaena Reveals a New Fold and Novel Calcium Binding Sites
To be Published
3OQU
DownloadVisualize
BU of 3oqu by Molmil
Crystal structure of native abscisic acid receptor PYL9 with ABA
Descriptor: (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, Abscisic acid receptor PYL9
Authors:Zhang, X, Zhang, Q, Chen, Z.
Deposit date:2010-09-04
Release date:2011-09-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Structural Insights into the Abscisic Acid Stereospecificity by the ABA Receptors PYR/PYL/RCAR
Plos One, 8, 2013

238582

數據於2025-07-09公開中

PDB statisticsPDBj update infoContact PDBjnumon