Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8C66
DownloadVisualize
BU of 8c66 by Molmil
Structure of the Reconstructed Ancestor of Phenolic Acid Decarboxylase AncPAD55
Descriptor: Phenolic acid decarboxylase N55, SULFATE ION
Authors:Schruefer, A, Mokos, D, Gruber, K, Daniel, B.
Deposit date:2023-01-11
Release date:2023-07-19
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Reconstructed ancestral sequence of bacterial phenolic acid decarboxylase show increased thermostability
To Be Published
6NB8
DownloadVisualize
BU of 6nb8 by Molmil
Crystal structure of anti- SARS-CoV human neutralizing S230 antibody Fab fragment
Descriptor: S230 antigen-binding (Fab) fragment, heavy chain, light chain
Authors:Walls, A.J, Xiong, X, Park, Y.J, Tortorici, M.A, Snijder, J, Quispe, J, Cameroni, E, Gopal, R, Dai, M, Lanzavecchia, A, Zambon, M, Rey, F.A, Corti, D, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2018-12-06
Release date:2019-02-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Unexpected Receptor Functional Mimicry Elucidates Activation of Coronavirus Fusion.
Cell, 176, 2019
8CLR
DownloadVisualize
BU of 8clr by Molmil
Integrated NMR/MD structure determination of a dynamic and thermodynamically stable CUUG RNA tetraloop
Descriptor: RNA hairpin with CUUG tetraloop
Authors:Oxenfarth, A, Kuemmerer, F, Bottaro, S, Schnieders, R, Pinter, G, Jonker, H.R.A, Fuertig, B, Richter, C, Blackledge, M, Lindorff-Larsen, K, Schwalbe, H.
Deposit date:2023-02-17
Release date:2023-07-19
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Integrated NMR/Molecular Dynamics Determination of the Ensemble Conformation of a Thermodynamically Stable CUUG RNA Tetraloop.
J.Am.Chem.Soc., 145, 2023
6NBT
DownloadVisualize
BU of 6nbt by Molmil
CRISPR Complex Subunit Csm3 from Staphylococcus epidermidis RP62a
Descriptor: CALCIUM ION, CRISPR-associated protein, SAMARIUM (III) ION
Authors:Dorsey, B.W, Mondragon, A.
Deposit date:2018-12-10
Release date:2019-02-13
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural organization of a Type III-A CRISPR effector subcomplex determined by X-ray crystallography and cryo-EM.
Nucleic Acids Res., 47, 2019
5EM3
DownloadVisualize
BU of 5em3 by Molmil
Crystal structure of the human BRPF1 bromodomain in complex with SEED9
Descriptor: NITRATE ION, Peregrin, quinolin-5-ol
Authors:Zhu, J, Caflisch, A.
Deposit date:2015-11-05
Release date:2016-06-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Twenty Crystal Structures of Bromodomain and PHD Finger Containing Protein 1 (BRPF1)/Ligand Complexes Reveal Conserved Binding Motifs and Rare Interactions.
J.Med.Chem., 59, 2016
5EN4
DownloadVisualize
BU of 5en4 by Molmil
Complex of 17-beta-hydroxysteroid dehydrogenase type 14 with inhibitor.
Descriptor: 17-beta-hydroxysteroid dehydrogenase 14, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION, ...
Authors:Bertoletti, N, Braun, F, Marchais-Oberwinkler, S, Heine, A, Klebe, G.
Deposit date:2015-11-09
Release date:2016-11-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:First Structure-Activity Relationship of 17 beta-Hydroxysteroid Dehydrogenase Type 14 Nonsteroidal Inhibitors and Crystal Structures in Complex with the Enzyme.
J. Med. Chem., 59, 2016
5EOI
DownloadVisualize
BU of 5eoi by Molmil
Crystal structure of copper bound human Carbonic anhydrase II
Descriptor: CHLORIDE ION, COPPER (II) ION, Carbonic anhydrase 2, ...
Authors:Ferraroni, M, Scozzafava, A, Supuran, C.T.
Deposit date:2015-11-10
Release date:2016-11-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of copper bound human Carbonic anhydrase II
to be published
6NSZ
DownloadVisualize
BU of 6nsz by Molmil
X-ray reduced Catalase 3 from N.Crassa (0.526 MGy)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Catalase-3, ...
Authors:Zarate-Romero, A, Rudino-Pinera, E, Stojanoff, V.
Deposit date:2019-01-27
Release date:2019-05-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray driven reduction of Cpd I of Catalase-3 from N. crassa reveals differential sensitivity of active sites and formation of ferrous state.
Arch.Biochem.Biophys., 666, 2019
5EL6
DownloadVisualize
BU of 5el6 by Molmil
Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycin
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Rozov, A, Demeshkina, N, Khusainov, I, Yusupov, M, Yusupova, G.
Deposit date:2015-11-04
Release date:2016-01-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Novel base-pairing interactions at the tRNA wobble position crucial for accurate reading of the genetic code.
Nat Commun, 7, 2016
6NRA
DownloadVisualize
BU of 6nra by Molmil
hTRiC-hPFD Class1 (No PFD)
Descriptor: T-complex protein 1 subunit alpha, T-complex protein 1 subunit beta, T-complex protein 1 subunit delta, ...
Authors:Gestaut, D.R, Roh, S.H, Ma, B, Pintilie, G, Joachimiak, L.A, Leitner, A, Walzthoeni, T, Aebersold, R, Chiu, W, Frydman, J.
Deposit date:2019-01-23
Release date:2019-06-19
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:The Chaperonin TRiC/CCT Associates with Prefoldin through a Conserved Electrostatic Interface Essential for Cellular Proteostasis.
Cell, 177, 2019
7NRG
DownloadVisualize
BU of 7nrg by Molmil
Crystal structure of a shortened IpgC variant in complex with (1R)-2-amino-1-(4-fluorophenyl)ethanol
Descriptor: (1R)-2-amino-1-(4-fluorophenyl)ethanol, CHLORIDE ION, Chaperone protein IpgC, ...
Authors:Gardonyi, M, Heine, A, Klebe, G.
Deposit date:2021-03-03
Release date:2022-03-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Crystal structure of a shortened IpgC variant in complex with (1R)-2-amino-1-(4-fluorophenyl)ethanol
To Be Published
6NTP
DownloadVisualize
BU of 6ntp by Molmil
PTP1B Domain of PTP1B-LOV2 Chimera
Descriptor: MAGNESIUM ION, Tyrosine-protein phosphatase non-receptor type 1,NPH1-1
Authors:Hongdusit, A, Sankaran, B, Zwart, P.H, Fox, J.M.
Deposit date:2019-01-30
Release date:2020-01-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Minimally disruptive optical control of protein tyrosine phosphatase 1B.
Nat Commun, 11, 2020
5EPS
DownloadVisualize
BU of 5eps by Molmil
Crystal structure of the human BRPF1 bromodomain in complex with SEED10
Descriptor: 1-methyl-3,4-dihydroquinoxalin-2-one, NITRATE ION, Peregrin
Authors:Zhu, J, Caflisch, A.
Deposit date:2015-11-12
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Twenty Crystal Structures of Bromodomain and PHD Finger Containing Protein 1 (BRPF1)/Ligand Complexes Reveal Conserved Binding Motifs and Rare Interactions.
J.Med.Chem., 59, 2016
7NWR
DownloadVisualize
BU of 7nwr by Molmil
Structure of BT1526, a myo-inositol-1-phosphate synthase
Descriptor: Inositol-3-phosphate synthase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION
Authors:Basle, A, Tang, G, Marles-Wright, J, Campopiano, D.
Deposit date:2021-03-17
Release date:2022-03-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Characterization of inositol lipid metabolism in gut-associated Bacteroidetes.
Nat Microbiol, 7, 2022
7NWY
DownloadVisualize
BU of 7nwy by Molmil
Crystal structure of alpha carbonic anhydrase from schistosoma mansoni with 4-(3-(4-fluorophenyl)ureido)benzenesulfonamide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-{[(4-fluorophenyl)carbamoyl]amino}benzenesulfonamide, Carbonic anhydrase, ...
Authors:Angeli, A, Ferraroni, M.
Deposit date:2021-03-17
Release date:2022-03-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.807 Å)
Cite:Structural Insights into Schistosoma mansoni Carbonic Anhydrase (SmCA) Inhibition by Selenoureido-Substituted Benzenesulfonamides.
J.Med.Chem., 64, 2021
7O2M
DownloadVisualize
BU of 7o2m by Molmil
Crystal Structure of Unlinked NS2B-NS3 Protease from Zika Virus in Complex with Inhibitor MI-2289
Descriptor: 1-[(3~{S},6~{S},9~{S},19~{R})-3,6-bis(4-azanylbutyl)-2,5,8,12,15,18-hexakis(oxidanylidene)-9-(phenylmethyl)-1,4,7,11,14,17-hexazacyclotricos-19-yl]guanidine, Genome polyprotein
Authors:Huber, S, Heine, A, Steinmetzer, T.
Deposit date:2021-03-30
Release date:2022-04-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-Based Optimization and Characterization of Macrocyclic Zika Virus NS2B-NS3 Protease Inhibitors.
J.Med.Chem., 65, 2022
7OC2
DownloadVisualize
BU of 7oc2 by Molmil
Crystal Structure of Unlinked NS2B-NS3 Protease from Zika Virus in Complex with Inhibitor MI-2295
Descriptor: Cyclic 1[2-CHLORO-4-METHOXY-PHENYL-OXYMETHYL]-4-[2,6-DICHLORO-PHENYL-OXYMETHYL]-BENZENE-(7-3)-7-BENZYL-1,3-DIMETHYL-8-PIPERAZIN-1-YL-3,7-DIHYDRO-PURINE-2,6-DIONE-(7-19)-N-ACETYL-L-CYSTEINE-(8-25)-[3R-[3A,4A,5B(S*)]]-5-(1-CARBOXY-1-PHOSPHONOETHOXY)-4-HYDROXY-3-(PHOSPHONOOXY)-1-CYCLOHEXENE-1-CARBOXYLIC ACID-()-(6E,11E)-HEPTADECA-6,11-DIENE-9,9-DIYLBIS(PHOSPHONIC ACID), Serine protease NS3, Serine protease subunit NS2B
Authors:Huber, S, Heine, A, Steinmetzer, T.
Deposit date:2021-04-25
Release date:2022-04-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure-Based Optimization and Characterization of Macrocyclic Zika Virus NS2B-NS3 Protease Inhibitors.
J.Med.Chem., 65, 2022
6O06
DownloadVisualize
BU of 6o06 by Molmil
Extracellular factors prime enterovirus particles for uncoating
Descriptor: VP1, VP2, VP3
Authors:Domanska, A, Ruokolainen, V, Pelliccia, M, Laajala, M, Butcher, S.J, Marjomaki, V.S.
Deposit date:2019-02-15
Release date:2019-06-12
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Extracellular Albumin and Endosomal Ions Prime Enterovirus Particles for Uncoating That Can Be Prevented by Fatty Acid Saturation.
J.Virol., 93, 2019
7O55
DownloadVisualize
BU of 7o55 by Molmil
Crystal Structure of Unlinked NS2B-NS3 Protease from Zika Virus in Complex with Inhibitor MI-2231
Descriptor: Inhibitor MI-2231, Serine protease NS3, Serine protease subunit NS2B
Authors:Huber, S, Heine, A, Steinmetzer, T.
Deposit date:2021-04-07
Release date:2022-04-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure-Based Optimization and Characterization of Macrocyclic Zika Virus NS2B-NS3 Protease Inhibitors.
J.Med.Chem., 65, 2022
7OD2
DownloadVisualize
BU of 7od2 by Molmil
NMR structure of the Anemonia erythraea AeTX-K toxin
Descriptor: Kappa-actitoxin-Aer3a
Authors:Qasim, A, Qassem, N, Chill, J.H.
Deposit date:2021-04-28
Release date:2022-04-06
Method:SOLUTION NMR
Cite:Structural determination of AeTX-K by NMR
To Be Published
7OBV
DownloadVisualize
BU of 7obv by Molmil
Crystal Structure of Unlinked NS2B-NS3 Protease from Zika Virus in Complex with Inhibitor MI-2248
Descriptor: Inhibitor MI-2248, Serine protease NS3, Serine protease subunit NS2B
Authors:Huber, S, Heine, A, Steinmetzer, T.
Deposit date:2021-04-23
Release date:2022-04-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure-Based Optimization and Characterization of Macrocyclic Zika Virus NS2B-NS3 Protease Inhibitors.
J.Med.Chem., 65, 2022
7O3N
DownloadVisualize
BU of 7o3n by Molmil
Crystal Structure of AcrB Single Mutant - 2
Descriptor: DODECYL-BETA-D-MALTOSIDE, Efflux pump membrane transporter
Authors:Ababou, A.
Deposit date:2021-04-02
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.561 Å)
Cite:Crystal Structure of AcrB Single Mutant - 2
To Be Published
7O04
DownloadVisualize
BU of 7o04 by Molmil
Crystal structure of a shortened IpgC variant in complex with [(2-chloro-5-nitrophenyl)methyl](methyl)amine
Descriptor: 1-(2-chloro-5-nitrophenyl)-N-methylmethanamine, CHLORIDE ION, Chaperone protein IpgC, ...
Authors:Gardonyi, M, Heine, A, Klebe, G.
Deposit date:2021-03-25
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal structure of a shortened IpgC variant in complex with [(2-chloro-5-nitrophenyl)methyl](methyl)amine
To be published
7NZT
DownloadVisualize
BU of 7nzt by Molmil
Crystal structure of chimeric carbonic anhydrase VA with 3-(cyclooctylamino)-2,5,6-trifluoro-4-[(2-hydroxyethyl)sulfonyl]benzenesulfonamide
Descriptor: 3-(cyclooctylamino)-2,5,6-trifluoro-4-[(2-hydroxyethyl)sulfonyl]benzenesulfonamide, Carbonic anhydrase 2, DIMETHYL SULFOXIDE, ...
Authors:Smirnov, A, Manakova, E, Grazulis, S.
Deposit date:2021-03-24
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure of chimeric carbonic anhydrase VA
To Be Published
6O2C
DownloadVisualize
BU of 6o2c by Molmil
Crystal structure of 4493 Fab in complex with circumsporozoite protein NANP3 and anti-kappa VHH domain
Descriptor: 1,2-ETHANEDIOL, 4493 Fab heavy chain, 4493 Kappa light chain, ...
Authors:Scally, S.W, Bosch, A, Prieto, K, Murugan, R, Wardemann, H, Julien, J.P.
Deposit date:2019-02-22
Release date:2020-07-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.017 Å)
Cite:Evolution of protective human antibodies against Plasmodium falciparum circumsporozoite protein repeat motifs.
Nat. Med., 26, 2020

224931

數據於2024-09-11公開中

PDB statisticsPDBj update infoContact PDBjnumon