Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7BLZ
DownloadVisualize
BU of 7blz by Molmil
Red alga C.merolae Photosystem I
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, (1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol, (3R)-beta,beta-caroten-3-ol, ...
Authors:Nelson, N, Klaiman, D, Hippler, M.
Deposit date:2021-01-19
Release date:2022-03-02
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Red alga C.merolae Photosystem I
To Be Published
7BO7
DownloadVisualize
BU of 7bo7 by Molmil
CRYSTAL STRUCTURE OF THE HUMAN PRMT5:MEP50 COMPLEX with JNJB44355437
Descriptor: (2~{R},3~{R},4~{S},5~{R})-2-[(4~{a}~{S},7~{a}~{S})-4-azanyl-1,4,4~{a},7~{a}-tetrahydropyrrolo[2,3-d]pyrimidin-7-yl]-5-(quinolin-7-yloxymethyl)oxolane-3,4-diol, 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Brown, D, Robinson, C, Carr, K.H, Pande, V.
Deposit date:2021-01-24
Release date:2022-03-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:CRYSTAL STRUCTURE OF THE HUMAN PRMT5:MEP50 COMPLEX with JNJB44355437
To Be Published
7BCV
DownloadVisualize
BU of 7bcv by Molmil
Brevibacterium linens encapsulin structure
Descriptor: Linocin-M18
Authors:Allende-Ballestero, C, Luque, D, Klem, R, Cornelissen, J.J.L.M, Caston, J.R.
Deposit date:2020-12-21
Release date:2022-10-05
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.28 Å)
Cite:Three-dimensional cryoEM structure of Brevibacterium linens encapsulin
To Be Published
4U4A
DownloadVisualize
BU of 4u4a by Molmil
Complex Structure of BRCA1 BRCT with singly phospho Abraxas
Descriptor: BRCA1-A complex subunit Abraxas, Breast cancer type 1 susceptibility protein
Authors:Badgujar, D, Hosur, M.V, Varma, A.K.
Deposit date:2014-07-23
Release date:2015-08-26
Method:X-RAY DIFFRACTION (3.51 Å)
Cite:Complex Structure of BRCA1 BRCT with singly phospho Abraxas
To Be Published
7CC8
DownloadVisualize
BU of 7cc8 by Molmil
Crystal structure of White Spot Syndrome Virus Thymidylate Synthase - Apo form
Descriptor: SULFATE ION, TRIETHYLENE GLYCOL, Thymidylate Synthase
Authors:Kumar, S, Panchal, N.V, Shaikh, N, Vasudevan, D.
Deposit date:2020-06-16
Release date:2020-11-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure analysis of thymidylate synthase from white spot syndrome virus reveals WSSV-specific structural elements.
Int.J.Biol.Macromol., 167, 2021
7CCR
DownloadVisualize
BU of 7ccr by Molmil
Structure of the 2:2 cGAS-nucleosome complex
Descriptor: Cyclic GMP-AMP synthase, DNA (147-MER), Histone H2A type 1-B/E, ...
Authors:Cao, D, Han, X, Fan, X, Xu, R.M, Zhang, X.
Deposit date:2020-06-17
Release date:2020-10-07
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Structural basis for nucleosome-mediated inhibition of cGAS activity.
Cell Res., 30, 2020
7CII
DownloadVisualize
BU of 7cii by Molmil
Crystal structure of L-methionine decarboxylase from Streptomyces sp.590 in complexed with L- methionine methyl ester (external aldimine form).
Descriptor: L-methionine decarboxylase, methyl (2S)-2-[(E)-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-4-methylsulfanyl-butanoate
Authors:Okawa, A, Shiba, T, Hayashi, M, Onoue, Y, Murota, M, Sato, D, Inagaki, J, Tamura, T, Harada, S, Inagaki, K.
Deposit date:2020-07-07
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structural basis for substrate specificity of l-methionine decarboxylase.
Protein Sci., 30, 2021
4U2W
DownloadVisualize
BU of 4u2w by Molmil
Atomic resolution crystal structure of HV-BBI protease inhibitor from amphibian skin in complex with bovine trypsin
Descriptor: 1,2-ETHANEDIOL, Bowman-Birk trypsin inhibitor, CALCIUM ION, ...
Authors:Grudnik, P, Golik, P, Malicki, S, Debowski, D, Legowska, A, Rolka, K, Dubin, G.
Deposit date:2014-07-18
Release date:2015-01-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1 Å)
Cite:Atomic resolution crystal structure of HV-BBI protease inhibitor from amphibian skin in complex with bovine trypsin.
Proteins, 83, 2015
4U65
DownloadVisualize
BU of 4u65 by Molmil
Structure of the periplasmic output domain of the Legionella pneumophila LapD ortholog CdgS9 in complex with Pseudomonas fluorescens LapG
Descriptor: CALCIUM ION, Putative cystine protease, Two component histidine kinase, ...
Authors:Chatterjee, D, Cooley, R.B, Boyd, C.D, Mehl, R.A, O'Toole, G.A, Sondermann, H.S.
Deposit date:2014-07-27
Release date:2014-08-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mechanistic insight into the conserved allosteric regulation of periplasmic proteolysis by the signaling molecule cyclic-di-GMP.
Elife, 3, 2014
7CCQ
DownloadVisualize
BU of 7ccq by Molmil
Structure of the 1:1 cGAS-nucleosome complex
Descriptor: Cyclic GMP-AMP synthase, DNA (147-MER), Histone H2A type 1-B/E, ...
Authors:Cao, D, Han, X, Fan, X, Xu, R.M, Zhang, X.
Deposit date:2020-06-17
Release date:2020-10-07
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis for nucleosome-mediated inhibition of cGAS activity.
Cell Res., 30, 2020
4U63
DownloadVisualize
BU of 4u63 by Molmil
Crystal structure of a bacterial class III photolyase from Agrobacterium tumefaciens at 1.67A resolution
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5,10-METHENYL-6,7,8-TRIHYDROFOLIC ACID, DNA photolyase, ...
Authors:Scheerer, P, Zhang, F, Kalms, J, von Stetten, D, Krauss, N, Oberpichler, I, Lamparter, T.
Deposit date:2014-07-26
Release date:2015-03-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:The Class III Cyclobutane Pyrimidine Dimer Photolyase Structure Reveals a New Antenna Chromophore Binding Site and Alternative Photoreduction Pathways.
J.Biol.Chem., 290, 2015
4U64
DownloadVisualize
BU of 4u64 by Molmil
Structure of the periplasmic output domain of the Legionella pneumophila LapD ortholog CdgS9 in the apo state
Descriptor: Two component histidine kinase, GGDEF domain protein/EAL domain protein
Authors:Chatterjee, D, Cooley, R.B, Boyd, C.D, Mehl, R.A, O'Toole, G.A, Sondermann, H.S.
Deposit date:2014-07-27
Release date:2014-08-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.141 Å)
Cite:Mechanistic insight into the conserved allosteric regulation of periplasmic proteolysis by the signaling molecule cyclic-di-GMP.
Elife, 3, 2014
7CFA
DownloadVisualize
BU of 7cfa by Molmil
Crystal structure of the restriction DNA glycosylase R.CcoLI
Descriptor: R.Pab1 family restriction endonuclease
Authors:Miyazono, K, Wang, D, Ito, T, Tanokura, M.
Deposit date:2020-06-25
Release date:2020-12-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.355 Å)
Cite:Crystal structure and DNA cleavage mechanism of the restriction DNA glycosylase R.CcoLI from Campylobacter coli.
Sci Rep, 11, 2021
4UE4
DownloadVisualize
BU of 4ue4 by Molmil
Structural basis for targeting and elongation arrest of Bacillus signal recognition particle
Descriptor: 6S RNA, FTSQ SIGNAL SEQUENCE, SIGNAL RECOGNITION PARTICLE PROTEIN
Authors:Beckert, B, Kedrov, A, Sohmen, D, Kempf, G, Wild, K, Sinning, I, Stahlberg, H, Wilson, D.N, Beckmann, R.
Deposit date:2014-12-15
Release date:2015-09-09
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Translational Arrest by a Prokaryotic Signal Recognition Particle is Mediated by RNA Interactions.
Nat.Struct.Mol.Biol., 22, 2015
7CCA
DownloadVisualize
BU of 7cca by Molmil
Crystal structure of White Spot Syndrome Virus Thymidylate Synthase - ternary complex with Methotrexate and dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, METHOTREXATE, Thymidylate Synthase
Authors:Panchal, N.V, Kumar, S, Shaikh, N, Vasudevan, D.
Deposit date:2020-06-16
Release date:2020-11-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure analysis of thymidylate synthase from white spot syndrome virus reveals WSSV-specific structural elements.
Int.J.Biol.Macromol., 167, 2021
7CIM
DownloadVisualize
BU of 7cim by Molmil
Crystal structure of L-methionine decarboxylase from Streptomyces sp.590 in complexed with 3-methlythiopropylamine (geminal diamine form).
Descriptor: L-methionine decarboxylase, [6-methyl-4-[(3-methylsulfanylpropylamino)methyl]-5-oxidanyl-pyridin-3-yl]methyl dihydrogen phosphate
Authors:Okawa, A, Shiba, T, Hayashi, M, Onoue, Y, Murota, M, Sato, D, Inagaki, J, Tamura, T, Harada, S, Inagaki, K.
Deposit date:2020-07-07
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for substrate specificity of l-methionine decarboxylase.
Protein Sci., 30, 2021
7C62
DownloadVisualize
BU of 7c62 by Molmil
The Crystal Structure of Parkinson disease protein 7 (DJ-1) from Biortus
Descriptor: GLYCEROL, Protein/nucleic acid deglycase DJ-1
Authors:Wang, F, Lin, D, Lv, Z, Tan, J.
Deposit date:2020-05-21
Release date:2020-07-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.027 Å)
Cite:The Crystal Structure of Parkinson disease protein 7 (DJ-1) from Biortus.
To Be Published
7CMR
DownloadVisualize
BU of 7cmr by Molmil
The Crystal Structure of human MYST1 from Biortus.
Descriptor: GLYCEROL, Histone acetyltransferase KAT8, ZINC ION
Authors:Wang, F, Lin, D, Lv, Z, Xu, X, Tan, J, Shang, H.
Deposit date:2020-07-28
Release date:2020-08-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Crystal Structure of human MYST1 from Biortus.
To Be Published
4UMM
DownloadVisualize
BU of 4umm by Molmil
The Cryo-EM structure of the palindromic DNA-bound USP-EcR nuclear receptor reveals an asymmetric organization with allosteric domain positioning
Descriptor: 2,3,14,20,22-PENTAHYDROXYCHOLEST-7-EN-6-ONE, 5'-D(*CP*AP*AP*GP*GP*GP*TP*TP*CP*AP*AP*TP*GP*CP *AP*CP*TP*TP*GP*TP)-3', 5'-D(*DGP*AP*CP*AP*AP*GP*TP*GP*CP*AP*TP*TP*GP*DAP *AP*CP*CP*CP*TP*T)-3', ...
Authors:Maletta, M, Orlov, I, Moras, D, Billas, I.M.L, Klaholz, B.P.
Deposit date:2014-05-19
Release date:2014-06-25
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (11.6 Å)
Cite:The Palindromic DNA-Bound Usp-Ecr Nuclear Receptor Adopts an Asymmetric Organization with Allosteric Domain Positioning.
Nat.Commun., 5, 2014
7CM2
DownloadVisualize
BU of 7cm2 by Molmil
The Crystal Structure of human USP7 USP domain from Biortus
Descriptor: GLYCEROL, Ubiquitin carboxyl-terminal hydrolase 7
Authors:Wang, F, Cheng, W, Lv, Z, Lin, D, Zhu, B, Miao, Q, Bao, X, Shang, H.
Deposit date:2020-07-24
Release date:2020-08-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The Crystal Structure of human USP7 USP domain from Biortus.
To Be Published
7CNE
DownloadVisualize
BU of 7cne by Molmil
Crystal Structure of Sphingomyelinase C from Streptomyces griseocarneus
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, SUCCINIC ACID, Sphingomyelinase C
Authors:Murayama, K, Fujisawa, I, Sugimori, D.
Deposit date:2020-07-31
Release date:2020-10-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the high thermal stability and optimum pH of sphingomyelinase C from Streptomyces griseocarneus.
J.Biosci.Bioeng., 131, 2021
4UJ6
DownloadVisualize
BU of 4uj6 by Molmil
Structure of surface layer protein SbsC, domains 1-6
Descriptor: SURFACE LAYER PROTEIN
Authors:Dordic, A, Pavkov-Keller, T, Eder, M, Egelseer, E.M, Davis, K, Mills, D, Sleytr, U.B, Kuehlbrandt, W, Vonck, J, Keller, W.
Deposit date:2015-04-08
Release date:2016-04-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structure of Surface Layer Protein Sbsc, Domains 1-6
To be Published
7C83
DownloadVisualize
BU of 7c83 by Molmil
Crystal structure of an integral membrane steroid 5-alpha-reductase PbSRD5A
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 3-oxo-5-alpha-steroid 4-dehydrogenase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Ren, R.B, Han, Y.F, Xiao, Q.J, Deng, D.
Deposit date:2020-05-28
Release date:2021-01-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of steroid reductase SRD5A reveals conserved steroid reduction mechanism.
Nat Commun, 12, 2021
4UE5
DownloadVisualize
BU of 4ue5 by Molmil
Structural basis for targeting and elongation arrest of Bacillus signal recognition particle
Descriptor: 7S RNA, SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN, SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN, ...
Authors:Beckert, B, Kedrov, A, Sohmen, D, Kempf, G, Wild, K, Sinning, I, Stahlberg, H, Wilson, D.N, Beckmann, R.
Deposit date:2014-12-15
Release date:2015-09-09
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Translational Arrest by a Prokaryotic Signal Recognition Particle is Mediated by RNA Interactions.
Nat.Struct.Mol.Biol., 22, 2015
7CBC
DownloadVisualize
BU of 7cbc by Molmil
Crystal structure of a de novo designed switch protein caging a hemagglutinin binder
Descriptor: De novo designed switch protein caging a hemagglutinin binder (sCageHA267_1S), ETHANOL
Authors:Lee, H, Oh, B.-H, Baker, D.
Deposit date:2020-06-11
Release date:2020-12-23
Last modified:2021-03-31
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:De novo design of modular and tunable protein biosensors.
Nature, 591, 2021

223790

數據於2024-08-14公開中

PDB statisticsPDBj update infoContact PDBjnumon