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Crystal Structure of the N-terminal Domain of Variant Surface Glycoprotein 545 (VSG545) of Trypanosome brucei brucei Lister 427
Descriptor:	Variant surface glycoprotein 545
Authors:	van Straaten, M, Stebbins, C.E.
Deposit date:	2023-07-28
Release date:	2023-09-13
Method:	X-RAY DIFFRACTION (3.15 Å)
Cite:	A structural classification of the variant surface glycoproteins of the African trypanosomey. Plos Negl Trop Dis, 17, 2023

1TTJ

THREE NEW CRYSTAL STRUCTURES OF POINT MUTATION VARIANTS OF MONOTIM: CONFORMATIONAL FLEXIBILITY OF LOOP-1,LOOP-4 AND LOOP-8
Descriptor:	PHOSPHOGLYCOLOHYDROXAMIC ACID, TRIOSEPHOSPHATE ISOMERASE
Authors:	Radha Kishan, K.V, Wierenga, R.K.
Deposit date:	1995-04-20
Release date:	1995-09-15
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	Three new crystal structures of point mutation variants of monoTIM: conformational flexibility of loop-1, loop-4 and loop-8. Structure, 3, 1995

1TPF

COMPARISON OF THE STRUCTURES AND THE CRYSTAL CONTACTS OF TRYPANOSOMAL TRIOSEPHOSPHATE ISOMERASE IN FOUR DIFFERENT CRYSTAL FORMS
Descriptor:	DIMETHYL SULFOXIDE, TRIOSEPHOSPHATE ISOMERASE
Authors:	Radha Kishan, K.V, Zeelen, J.Ph, Wierenga, R.K.
Deposit date:	1994-02-28
Release date:	1994-05-31
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Comparison of the structures and the crystal contacts of trypanosomal triosephosphate isomerase in four different crystal forms. Protein Sci., 3, 1994

1TPD

STRUCTURES OF THE "OPEN" AND "CLOSED" STATE OF TRYPANOSOMAL TRIOSEPHOSPHATE ISOMERASE, AS OBSERVED IN A NEW CRYSTAL FORM: IMPLICATIONS FOR THE REACTION MECHANISM
Descriptor:	TRIOSEPHOSPHATE ISOMERASE
Authors:	Noble, M.E.M, Zeelen, J.Ph, Wierenga, R.K.
Deposit date:	1994-02-28
Release date:	1994-05-31
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	Structures of the "open" and "closed" state of trypanosomal triosephosphate isomerase, as observed in a new crystal form: implications for the reaction mechanism. Proteins, 16, 1993

1TMH

MODULAR MUTAGENESIS OF A TIM-BARREL ENZYME: THE CRYSTAL STRUCTURE OF A CHIMERIC E. COLI TIM HAVING THE EIGHTH (BETA-ALPHA)-UNIT REPLACED BY THE EQUIVALENT UNIT OF CHICKEN TIM
Descriptor:	SULFATE ION, TRIOSEPHOSPHATE ISOMERASE
Authors:	Radha Kishan, K.V, Zeelen, J.Ph, Wierenga, R.K.
Deposit date:	1994-03-22
Release date:	1994-06-22
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (2.8 Å)
Cite:	Modular mutagenesis of a TIM-barrel enzyme: the crystal structure of a chimeric E. coli TIM having the eighth beta alpha-unit replaced by the equivalent unit of chicken TIM. Protein Eng., 7, 1994

1TPE

COMPARISON OF THE STRUCTURES AND THE CRYSTAL CONTACTS OF TRYPANOSOMAL TRIOSEPHOSPHATE ISOMERASE IN FOUR DIFFERENT CRYSTAL FORMS
Descriptor:	TRIOSEPHOSPHATE ISOMERASE
Authors:	Noble, M.E.M, Radha Kishan, K.V, Zeelen, J.Ph, Wierenga, R.K.
Deposit date:	1994-02-28
Release date:	1994-05-31
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	Comparison of the structures and the crystal contacts of trypanosomal triosephosphate isomerase in four different crystal forms. Protein Sci., 3, 1994

1PXT

THE 2.8 ANGSTROMS STRUCTURE OF PEROXISOMAL 3-KETOACYL-COA THIOLASE OF SACCHAROMYCES CEREVISIAE: A FIVE LAYERED A-B-A-B-A STRUCTURE, CONSTRUCTED FROM TWO CORE DOMAINS OF IDENTICAL TOPOLOGY
Descriptor:	PEROXISOMAL 3-KETOACYL-COA THIOLASE
Authors:	Mathieu, M, Wierenga, R.K.
Deposit date:	1994-07-04
Release date:	1994-08-31
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (2.8 Å)
Cite:	The 2.8 A crystal structure of peroxisomal 3-ketoacyl-CoA thiolase of Saccharomyces cerevisiae: a five-layered alpha beta alpha beta alpha structure constructed from two core domains of identical topology. Structure, 2, 1994

8B3W

Structure of metacyclic VSG (mVSG) 1954 from Trypanosoma brucei
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BROMIDE ION, Variant surface glycoprotein 1954
Authors:	Chandra, M, Stebbins, C.E.
Deposit date:	2022-09-17
Release date:	2023-01-25
Last modified:	2023-04-19
Method:	X-RAY DIFFRACTION (1.681 Å)
Cite:	Structural similarities between the metacyclic and bloodstream form variant surface glycoproteins of the African trypanosome. Plos Negl Trop Dis, 17, 2023

8B3B

Structure of metacyclic VSG (mVSG) 531 from Trypanosoma brucei
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, Variant surface glycoprotein 531, alpha-D-mannopyranose, ...
Authors:	Chandra, M, Stebbins, C.E.
Deposit date:	2022-09-16
Release date:	2023-01-25
Last modified:	2024-02-07
Method:	X-RAY DIFFRACTION (1.949 Å)
Cite:	Structural similarities between the metacyclic and bloodstream form variant surface glycoproteins of the African trypanosome. Plos Negl Trop Dis, 17, 2023

7AQX

Co-Crystal Structure of Variant Surface Glycoprotein VSG2 in complex with Nanobody VSG2(NB9)
Descriptor:	CITRIC ACID, Nanobody VSG2(NB9), SODIUM ION, ...
Authors:	Stebbins, C.E, Hempelmann, A.
Deposit date:	2020-10-23
Release date:	2021-11-03
Last modified:	2024-02-07
Method:	X-RAY DIFFRACTION (1.499 Å)
Cite:	Nanobody-mediated macromolecular crowding induces membrane fission and remodeling in the African trypanosome. Cell Rep, 37, 2021

7AQZ

Co-Crystal Structure of Variant Surface Glycoprotein VSG2 in complex with Nanobody VSG2(NB14)
Descriptor:	CITRIC ACID, Nanobody VSG2(NB14), SODIUM ION, ...
Authors:	Stebbins, C.E, Hempelmann, A, VanStraaten, M.
Deposit date:	2020-10-23
Release date:	2021-11-03
Last modified:	2024-02-07
Method:	X-RAY DIFFRACTION (1.3 Å)
Cite:	Nanobody-mediated macromolecular crowding induces membrane fission and remodeling in the African trypanosome. Cell Rep, 37, 2021

7AQY

Co-Crystal Structure of Variant Surface Glycoprotein VSG2 in complex with Nanobody VSG2(NB11)
Descriptor:	Nanobody VSG2(NB11), Variant surface glycoprotein MITAT 1.2, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:	Stebbins, C.E, Hempelmann, A, VanStraaten, M.
Deposit date:	2020-10-23
Release date:	2021-11-03
Last modified:	2024-02-07
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Nanobody-mediated macromolecular crowding induces membrane fission and remodeling in the African trypanosome. Cell Rep, 37, 2021

7AR0

Co-Crystal Structure of Variant Surface Glycoprotein VSG2 in complex with Nanobody VSG2(NB19)
Descriptor:	Nanobody VSG2(NB19), Variant surface glycoprotein MITAT 1.2, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:	Stebbins, C.E, Hempelmann, A.
Deposit date:	2020-10-23
Release date:	2021-11-03
Last modified:	2024-02-07
Method:	X-RAY DIFFRACTION (2.139 Å)
Cite:	Nanobody-mediated macromolecular crowding induces membrane fission and remodeling in the African trypanosome. Cell Rep, 37, 2021

1AFW

THE 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE DIMERIC PEROXISOMAL THIOLASE OF SACCHAROMYCES CEREVISIAE
Descriptor:	(4R)-2-METHYLPENTANE-2,4-DIOL, 3-KETOACETYL-COA THIOLASE
Authors:	Mathieu, M, Wierenga, R.K.
Deposit date:	1997-03-15
Release date:	1997-06-16
Last modified:	2024-02-07
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	The 1.8 A crystal structure of the dimeric peroxisomal 3-ketoacyl-CoA thiolase of Saccharomyces cerevisiae: implications for substrate binding and reaction mechanism. J.Mol.Biol., 273, 1997

1AMK

LEISHMANIA MEXICANA TRIOSE PHOSPHATE ISOMERASE
Descriptor:	2-PHOSPHOGLYCOLIC ACID, TRIOSE PHOSPHATE ISOMERASE
Authors:	Williams, J.C, Wierenga, R.
Deposit date:	1997-06-17
Release date:	1997-12-17
Last modified:	2024-05-22
Method:	X-RAY DIFFRACTION (1.83 Å)
Cite:	Structural and mutagenesis studies of leishmania triosephosphate isomerase: a point mutation can convert a mesophilic enzyme into a superstable enzyme without losing catalytic power. Protein Eng., 12, 1999

1B9B

TRIOSEPHOSPHATE ISOMERASE OF THERMOTOGA MARITIMA
Descriptor:	PROTEIN (TRIOSEPHOSPHATE ISOMERASE), SULFATE ION
Authors:	Maes, D, Wierenga, R.K.
Deposit date:	1999-02-09
Release date:	2000-01-01
Last modified:	2023-08-09
Method:	X-RAY DIFFRACTION (2.85 Å)
Cite:	The crystal structure of triosephosphate isomerase (TIM) from Thermotoga maritima: a comparative thermostability structural analysis of ten different TIM structures. Proteins, 37, 1999

1CSK

THE CRYSTAL STRUCTURE OF HUMAN CSKSH3: STRUCTURAL DIVERSITY NEAR THE RT-SRC AND N-SRC LOOP
Descriptor:	C-SRC SH3 DOMAIN
Authors:	Mathieu, M, Wierenga, R.K.
Deposit date:	1994-03-22
Release date:	1994-07-31
Last modified:	2024-02-07
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	The crystal structure of human CskSH3: structural diversity near the RT-Src and n-Src loop. FEBS Lett., 341, 1994

2DUB

ENOYL-COA HYDRATASE COMPLEXED WITH OCTANOYL-COA
Descriptor:	2-ENOYL-COA HYDRATASE, OCTANOYL-COENZYME A
Authors:	Engel, C.K, Wierenga, R.K.
Deposit date:	1997-04-28
Release date:	1998-04-29
Last modified:	2023-08-09
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	The crystal structure of enoyl-CoA hydratase complexed with octanoyl-CoA reveals the structural adaptations required for binding of a long chain fatty acid-CoA molecule. J.Mol.Biol., 275, 1998

1TTI

THREE NEW CRYSTAL STRUCTURES OF POINT MUTATION VARIANTS OF MONOTIM: CONFORMATIONAL FLEXIBILITY OF LOOP-1,LOOP-4 AND LOOP-8
Descriptor:	2-PHOSPHOGLYCOLIC ACID, TRIOSEPHOSPHATE ISOMERASE
Authors:	Radha Kishan, K.V, Wierenga, R.K.
Deposit date:	1995-04-19
Release date:	1995-10-15
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	Three new crystal structures of point mutation variants of monoTIM: conformational flexibility of loop-1, loop-4 and loop-8. Structure, 3, 1995

1TRI

THE CRYSTAL STRUCTURE OF AN ENGINEERED MONOMERIC TRIOSEPHOSPHATE ISOMERASE, MONOTIM: THE CORRECT MODELLING OF AN EIGHT-RESIDUE LOOP
Descriptor:	SULFATE ION, TRIOSEPHOSPHATE ISOMERASE
Authors:	Wierenga, R.K.
Deposit date:	1993-10-08
Release date:	1994-07-31
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	The crystal structure of an engineered monomeric triosephosphate isomerase, monoTIM: the correct modelling of an eight-residue loop. Structure, 1, 1993

1TRD

THE INFLUENCE OF CRYSTAL PACKING ON CRYSTALLOGRAPHIC BINDING STUDIES: A NEW CRYSTAL FORM OF TRYPANOSOMAL TIM
Descriptor:	PHOSPHOGLYCOLOHYDROXAMIC ACID, TRIOSEPHOSPHATE ISOMERASE
Authors:	Noble, M.E.M, Wierenga, R.K.
Deposit date:	1992-10-06
Release date:	1993-10-31
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Structures of the "open" and "closed" state of trypanosomal triosephosphate isomerase, as observed in a new crystal form: implications for the reaction mechanism. Proteins, 16, 1993

1TRE

THE STRUCTURE OF TRIOSEPHOSPHATE ISOMERASE FROM ESCHERICHIA COLI DETERMINED AT 2.6 ANGSTROM RESOLUTION
Descriptor:	TRIOSEPHOSPHATE ISOMERASE
Authors:	Noble, M.E.M, Wierenga, R.K.
Deposit date:	1992-10-12
Release date:	1993-10-31
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (2.6 Å)
Cite:	Structure of triosephosphate isomerase from Escherichia coli determined at 2.6 A resolution. Acta Crystallogr.,Sect.D, 49, 1993

1QDS

SUPERSTABLE E65Q MUTANT OF LEISHMANIA MEXICANA TRIOSEPHOSPHATE ISOMERASE (TIM)
Descriptor:	2-PHOSPHOGLYCOLIC ACID, TRIOSEPHOSPHATE ISOMERASE
Authors:	Lambeir, A.M, Backmann, J, Ruiz-Sanz, J, Filimonov, V, Nielsen, J.E, Vriend, G, Kursula, I, Norledge, B.V, Wierenga, R.K.
Deposit date:	1999-07-10
Release date:	2000-12-13
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	The ionization of a buried glutamic acid is thermodynamically linked to the stability of Leishmania mexicana triose phosphate isomerase. Eur.J.Biochem., 267, 2000

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