Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5ZVC
DownloadVisualize
BU of 5zvc by Molmil
P domain of GII.13 norovirus capsid complexed with Lewis A trisaccharide
Descriptor: GLYCEROL, Major capsid protein VP1, beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Chen, Y, Li, X.
Deposit date:2018-05-10
Release date:2018-10-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Adaptations of Norovirus GII.17/13/21 Lineage through Two Distinct Evolutionary Paths.
J. Virol., 93, 2019
5ZV9
DownloadVisualize
BU of 5zv9 by Molmil
P domain of GII.13 norovirus capsid
Descriptor: GLYCEROL, Major capsid protein VP1
Authors:Chen, Y, Li, X.
Deposit date:2018-05-09
Release date:2018-10-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Adaptations of Norovirus GII.17/13/21 Lineage through Two Distinct Evolutionary Paths.
J. Virol., 93, 2019
5ZV5
DownloadVisualize
BU of 5zv5 by Molmil
P domain of GII.17-2014/15 complexed with A-trisaccharide
Descriptor: VP1, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]alpha-D-galactopyranose
Authors:Chen, Y, Li, X.
Deposit date:2018-05-09
Release date:2018-10-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Adaptations of Norovirus GII.17/13/21 Lineage through Two Distinct Evolutionary Paths.
J. Virol., 93, 2019
8Y3X
DownloadVisualize
BU of 8y3x by Molmil
Cell divisome sPG hydrolysis machinery FtsEX-EnvC
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cell division ATP-binding protein FtsE, Cell division protein FtsX, ...
Authors:Zhang, Z, Dong, H, Chen, Y.
Deposit date:2024-01-29
Release date:2024-05-08
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Structure and activity of the septal peptidoglycan hydrolysis machinery crucial for bacterial cell division.
Plos Biol., 22, 2024
5ZUQ
DownloadVisualize
BU of 5zuq by Molmil
P domain of GII.17-1978
Descriptor: VP1
Authors:Chen, Y, Li, X.
Deposit date:2018-05-08
Release date:2018-10-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural Adaptations of Norovirus GII.17/13/21 Lineage through Two Distinct Evolutionary Paths.
J. Virol., 93, 2019
5ZUS
DownloadVisualize
BU of 5zus by Molmil
P domain of GII.17-2014/15
Descriptor: VP1
Authors:Chen, Y, Li, X.
Deposit date:2018-05-08
Release date:2018-10-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Adaptations of Norovirus GII.17/13/21 Lineage through Two Distinct Evolutionary Paths.
J. Virol., 93, 2019
3R24
DownloadVisualize
BU of 3r24 by Molmil
Crystal structure of nsp10/nsp16 complex of SARS coronavirus
Descriptor: 2'-O-methyl transferase, Non-structural protein 10 and Non-structural protein 11, S-ADENOSYLMETHIONINE, ...
Authors:Liu, X, Guo, D, Su, C, Chen, Y.
Deposit date:2011-03-13
Release date:2011-10-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Biochemical and structural insights into the mechanisms of SARS coronavirus RNA ribose 2'-O-methylation by nsp16/nsp10 protein complex.
Plos Pathog., 7, 2011
7EJU
DownloadVisualize
BU of 7eju by Molmil
Junin virus(JUNV) RNA polymerase L complexed with Z protein
Descriptor: MAGNESIUM ION, RING finger protein Z, RNA-directed RNA polymerase L, ...
Authors:Chen, Y.
Deposit date:2021-04-02
Release date:2021-07-07
Last modified:2025-06-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural basis for recognition and regulation of arenavirus polymerase L by Z protein.
Nat Commun, 12, 2021
7CWE
DownloadVisualize
BU of 7cwe by Molmil
Human Fructose-1,6-bisphosphatase 1 in APO R-state
Descriptor: Fructose-1,6-bisphosphatase 1, MAGNESIUM ION
Authors:Chen, Y, Zhang, J, Li, C, Cao, Y.
Deposit date:2020-08-28
Release date:2021-09-08
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Human Fructose-1,6-bisphosphatase 1 in APO R-state
To Be Published
7V4L
DownloadVisualize
BU of 7v4l by Molmil
Cryo-EM Structure of Camellia sinensis glutamine synthetase CsGSIb inactive Pentamer State III
Descriptor: Glutamine synthetase
Authors:Xu, W, Chen, Y, Xing, Q, Huang, C.
Deposit date:2021-08-13
Release date:2022-05-18
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Assembly status transition offers an avenue for activity modulation of a supramolecular enzyme.
Elife, 10, 2021
7V4J
DownloadVisualize
BU of 7v4j by Molmil
Cryo-EM Structure of Camellia sinensis glutamine synthetase CsGSIb inactive Pentamer State I
Descriptor: Glutamine synthetase
Authors:Xu, W, Chen, Y, Xing, Q, Huang, C.
Deposit date:2021-08-13
Release date:2022-05-18
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Assembly status transition offers an avenue for activity modulation of a supramolecular enzyme.
Elife, 10, 2021
7V4I
DownloadVisualize
BU of 7v4i by Molmil
Cryo-EM Structure of Camellia sinensis glutamine synthetase CsGSIb decamer assembly
Descriptor: Glutamine synthetase
Authors:Xu, W, Chen, Y, Xing, Q, Huang, C.
Deposit date:2021-08-13
Release date:2022-05-18
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Assembly status transition offers an avenue for activity modulation of a supramolecular enzyme.
Elife, 10, 2021
7V4K
DownloadVisualize
BU of 7v4k by Molmil
Cryo-EM Structure of Camellia sinensis glutamine synthetase CsGSIb inactive Pentamer State II
Descriptor: Glutamine synthetase
Authors:Xu, W, Chen, Y, Xing, Q, Huang, C.
Deposit date:2021-08-13
Release date:2022-05-18
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Assembly status transition offers an avenue for activity modulation of a supramolecular enzyme.
Elife, 10, 2021
7V4H
DownloadVisualize
BU of 7v4h by Molmil
Cryo-EM Structure of Glycine max glutamine synthetase GmGS Beta2
Descriptor: Glutamine synthetase
Authors:Xu, W, Chen, Y, Xing, Q, Huang, C.
Deposit date:2021-08-13
Release date:2022-05-18
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Assembly status transition offers an avenue for activity modulation of a supramolecular enzyme.
Elife, 10, 2021
9INU
DownloadVisualize
BU of 9inu by Molmil
Novel PD-L1/VISTA dual inhibitor as potential immunotherapy agents
Descriptor: (2~{S})-2-[[6-methoxy-2-[(2-methyl-3-phenyl-phenyl)amino]pyrimidin-4-yl]methylamino]-3-oxidanyl-propanoic acid, Programmed cell death 1 ligand 1
Authors:Cheng, Y, Xiao, Y.B.
Deposit date:2024-07-08
Release date:2025-03-12
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Novel PD-L1/VISTA Dual Inhibitor as Potential Immunotherapy Agents.
J.Med.Chem., 68, 2025
8ET5
DownloadVisualize
BU of 8et5 by Molmil
Crystal structure of arabidopsis thaliana acetohydroxyacid synthase S653T mutant in complex with amidosulfuron
Descriptor: 2-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-2-[(1~{S})-1-(dioxidanyl)-1-oxidanyl-ethyl]-4-methyl-1,3-thiazol-5-yl]ethyl phosphono hydrogen phosphate, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Acetolactate synthase, ...
Authors:Guddat, L.W, Cheng, Y.
Deposit date:2022-10-16
Release date:2023-03-29
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Crystal Structure of the Commercial Herbicide, Amidosulfuron, in Complex with Arabidopsis thaliana Acetohydroxyacid Synthase.
J.Agric.Food Chem., 71, 2023
8ET4
DownloadVisualize
BU of 8et4 by Molmil
Crystal structure of wild-type arabidopsis thaliana acetohydroxyacid synthase in complex with amidosulfuron
Descriptor: 2-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-2-[(1~{S})-1-(dioxidanyl)-1-oxidanyl-ethyl]-4-methyl-1,3-thiazol-5-yl]ethyl phosphono hydrogen phosphate, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Acetolactate synthase, ...
Authors:Guddat, L.W, Cheng, Y.
Deposit date:2022-10-16
Release date:2023-03-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal Structure of the Commercial Herbicide, Amidosulfuron, in Complex with Arabidopsis thaliana Acetohydroxyacid Synthase.
J.Agric.Food Chem., 71, 2023
6UTF
DownloadVisualize
BU of 6utf by Molmil
Allosteric coupling between alpha-rings of the 20S proteasome, archaea 20S proteasome singly capped with a PAN complex
Descriptor: Proteasome subunit alpha, Proteasome subunit beta
Authors:Cheng, Y, Yu, Z.
Deposit date:2019-10-29
Release date:2020-09-09
Last modified:2025-06-04
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Allosteric coupling between alpha-rings of the 20S proteasome.
Nat Commun, 11, 2020
6UTH
DownloadVisualize
BU of 6uth by Molmil
Allosteric coupling between alpha-rings of 20S proteasome, 20S proteasome singly capped with a PA26/E102A_PANc, together with LFP incubation
Descriptor: Proteasome activator protein PA26, Proteasome subunit alpha, Proteasome subunit beta
Authors:Cheng, Y, Yu, Z.
Deposit date:2019-10-29
Release date:2020-09-09
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Allosteric coupling between alpha-rings of the 20S proteasome.
Nat Commun, 11, 2020
6UTJ
DownloadVisualize
BU of 6utj by Molmil
Allosteric couple between alpha rings of the 20S proteasome. 20S proteasome singly capped by PA26/E102A, C-terminus replaced by PAN C-terminus
Descriptor: Proteasome activator protein PA26, Proteasome subunit alpha, Proteasome subunit beta
Authors:Cheng, Y, Yu, Z.
Deposit date:2019-10-29
Release date:2020-09-09
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Allosteric coupling between alpha-rings of the 20S proteasome.
Nat Commun, 11, 2020
6UTI
DownloadVisualize
BU of 6uti by Molmil
Allosteric coupling between alpha-rings of 20S proteasome, 20S proteasome with singly capped PAN complex
Descriptor: Proteasome subunit alpha, Proteasome subunit beta
Authors:Cheng, Y, Yu, Z.
Deposit date:2019-10-29
Release date:2020-09-09
Last modified:2025-05-14
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Allosteric coupling between alpha-rings of the 20S proteasome.
Nat Commun, 11, 2020
8K5N
DownloadVisualize
BU of 8k5n by Molmil
Discovery of Novel PD-L1 Inhibitors That Induce Dimerization and Degradation of PD-L1 Based on Fragment Coupling Strategy
Descriptor: 3-[(1~{S})-1-[6-methoxy-3-methyl-5-[[[(2~{S})-5-oxidanylidenepyrrolidin-2-yl]methylamino]methyl]pyridin-2-yl]oxy-2,3-dihydro-1~{H}-inden-4-yl]-2-methyl-~{N}-[5-[[[(2~{S})-5-oxidanylidenepyrrolidin-2-yl]methylamino]methyl]pyridin-2-yl]benzamide, Programmed cell death 1 ligand 1
Authors:Cheng, Y, Xiao, Y.B.
Deposit date:2023-07-22
Release date:2024-01-03
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of Novel PD-L1 Inhibitors That Induce the Dimerization, Internalization, and Degradation of PD-L1 Based on the Fragment Coupling Strategy.
J.Med.Chem., 66, 2023
7DY7
DownloadVisualize
BU of 7dy7 by Molmil
Discovery of Novel Small-molecule Inhibitors of PD-1/PD-L1 Axis that Promotes PD-L1 Internalization and Degradation
Descriptor: 2-[[3-[[5-(2-methyl-3-phenyl-phenyl)-1,3,4-oxadiazol-2-yl]amino]phenyl]methylamino]ethanol, Programmed cell death 1 ligand 1
Authors:Cheng, Y, Wang, T.Y, Lu, M.L, Jiang, S, Xiao, Y.B.
Deposit date:2021-01-20
Release date:2022-01-26
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Discovery of Small-Molecule Inhibitors of the PD-1/PD-L1 Axis That Promote PD-L1 Internalization and Degradation.
J.Med.Chem., 65, 2022
8JMV
DownloadVisualize
BU of 8jmv by Molmil
Flagellar fibrils from Bacillus amyloliquefaciens
Descriptor: Flagella
Authors:Cao, Q, Cheng, Y.
Deposit date:2023-06-05
Release date:2023-12-06
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Serine peptidase Vpr forms enzymatically active fibrils outside Bacillus bacteria revealed by cryo-EM.
Nat Commun, 14, 2023
8JMW
DownloadVisualize
BU of 8jmw by Molmil
Fibril form of serine peptidase Vpr
Descriptor: S8 family serine peptidase
Authors:Cao, Q, Cheng, Y.
Deposit date:2023-06-05
Release date:2023-12-06
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Serine peptidase Vpr forms enzymatically active fibrils outside Bacillus bacteria revealed by cryo-EM.
Nat Commun, 14, 2023

238582

數據於2025-07-09公開中

PDB statisticsPDBj update infoContact PDBjnumon