1TM9
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![BU of 1tm9 by Molmil](/molmil-images/mine/1tm9) | NMR Structure of gene target number gi3844938 from Mycoplasma genitalium: Berkeley Structural Genomics Center | Descriptor: | Hypothetical protein MG354 | Authors: | Pelton, J.G, Shi, J, Yokota, H, Kim, R, Wemmer, D.E, Berkeley Structural Genomics Center (BSGC) | Deposit date: | 2004-06-10 | Release date: | 2004-08-10 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | NMR Structure of Gene Target gi3844938 from Mycoplasma genitalium To be Published
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1NTC
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1F4V
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![BU of 1f4v by Molmil](/molmil-images/mine/1f4v) | CRYSTAL STRUCTURE OF ACTIVATED CHEY BOUND TO THE N-TERMINUS OF FLIM | Descriptor: | BERYLLIUM TRIFLUORIDE ION, CHEMOTAXIS CHEY PROTEIN, FLAGELLAR MOTOR SWITCH PROTEIN, ... | Authors: | Lee, S.Y, Cho, H.S, Pelton, J.G, Yan, D, Henderson, R.K, King, D, Huang, L.S, Kustu, S, Berry, E.A, Wemmer, D.E. | Deposit date: | 2000-06-10 | Release date: | 2001-01-17 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (2.22 Å) | Cite: | Crystal structure of an activated response regulator bound to its target. Nat.Struct.Biol., 8, 2001
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3HSF
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![BU of 3hsf by Molmil](/molmil-images/mine/3hsf) | HEAT SHOCK TRANSCRIPTION FACTOR (HSF) | Descriptor: | HEAT SHOCK TRANSCRIPTION FACTOR | Authors: | Damberger, F.F, Pelton, J.G, Liu, C, Cho, H, Harrison, C.J, Nelson, H.C.M, Wemmer, D.E. | Deposit date: | 1995-08-07 | Release date: | 1995-11-14 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Refined solution structure and dynamics of the DNA-binding domain of the heat shock factor from Kluyveromyces lactis. J.Mol.Biol., 254, 1995
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4FTH
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![BU of 4fth by Molmil](/molmil-images/mine/4fth) | Crystal Structure of NtrC4 DNA-binding domain bound to double-stranded DNA | Descriptor: | 5'-D(*AP*CP*TP*TP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*AP*AP*AP*TP*GP*CP*AP*T)-3', 5'-D(P*GP*AP*TP*GP*CP*AP*TP*TP*TP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*AP*A)-3', Transcriptional regulator (NtrC family) | Authors: | Vidangos, N.K, Heideker, J, Lyubimov, A.Y, Lamers, M, Huo, Y, Pelton, J.G, Ton, J, Gralla, J.D, Kuriyan, J, Berger, J.M, Wemmer, D.E. | Deposit date: | 2012-06-27 | Release date: | 2012-08-29 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (3.004 Å) | Cite: | DNA Recognition by a sigma (54) Transcriptional Activator from Aquifex aeolicus. J.Mol.Biol., 426, 2014
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1FQW
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![BU of 1fqw by Molmil](/molmil-images/mine/1fqw) | CRYSTAL STRUCTURE OF ACTIVATED CHEY | Descriptor: | BERYLLIUM TRIFLUORIDE ION, CHEMOTAXIS CHEY PROTEIN, MANGANESE (II) ION | Authors: | Lee, S.Y, Cho, H.S, Pelton, J.G, Yan, D, Berry, E.A, Wemmer, D.E. | Deposit date: | 2000-09-07 | Release date: | 2001-07-18 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (2.37 Å) | Cite: | Crystal structure of activated CheY. Comparison with other activated receiver domains. J.Biol.Chem., 276, 2001
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1DJM
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![BU of 1djm by Molmil](/molmil-images/mine/1djm) | SOLUTION STRUCTURE OF BEF3-ACTIVATED CHEY FROM ESCHERICHIA COLI | Descriptor: | CHEMOTAXIS PROTEIN Y | Authors: | Cho, H.S, Lee, S.Y, Yan, D, Pan, X, Parkinson, J.S, Kustu, S, Wemmer, D.E, Pelton, J.G. | Deposit date: | 1999-12-03 | Release date: | 2000-04-05 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | NMR structure of activated CheY. J.Mol.Biol., 297, 2000
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3B39
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3E7L
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![BU of 3e7l by Molmil](/molmil-images/mine/3e7l) | Crystal structure of sigma54 activator NtrC4's DNA binding domain | Descriptor: | Transcriptional regulator (NtrC family), ZINC ION | Authors: | Batchelor, J.D, Doucleff, M, Lee, C.-J, Matsubara, K, De Carlo, S, Heideker, J, Lamers, M.M, Pelton, J.G, Wemmer, D.E. | Deposit date: | 2008-08-18 | Release date: | 2008-11-25 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.252 Å) | Cite: | Structure and regulatory mechanism of Aquifex aeolicus NtrC4: variability and evolution in bacterial transcriptional regulation. J.Mol.Biol., 384, 2008
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3DZD
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![BU of 3dzd by Molmil](/molmil-images/mine/3dzd) | Crystal structure of sigma54 activator NTRC4 in the inactive state | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, SODIUM ION, Transcriptional regulator (NtrC family) | Authors: | Batchelor, J.D, Doucleff, M, Lee, C.-J, Matsubara, K, De Carlo, S, Heideker, J, Lamers, M.M, Pelton, J.G, Wemmer, D.E. | Deposit date: | 2008-07-29 | Release date: | 2008-11-25 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Structure and regulatory mechanism of Aquifex aeolicus NtrC4: variability and evolution in bacterial transcriptional regulation. J.Mol.Biol., 384, 2008
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1ZIT
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2AHQ
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2M20
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![BU of 2m20 by Molmil](/molmil-images/mine/2m20) | EGFR transmembrane - juxtamembrane (TM-JM) segment in bicelles: MD guided NMR refined structure. | Descriptor: | Epidermal growth factor receptor | Authors: | Endres, N.F, Das, R, Smith, A, Arkhipov, A, Kovacs, E, Huang, Y, Pelton, J.G, Shan, Y, Shaw, D.E, Wemmer, D.E, Groves, J.T, Kuriyan, J. | Deposit date: | 2012-12-11 | Release date: | 2013-02-20 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Conformational Coupling across the Plasma Membrane in Activation of the EGF Receptor. Cell(Cambridge,Mass.), 152, 2013
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4L4U
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![BU of 4l4u by Molmil](/molmil-images/mine/4l4u) | Crystal structure of construct containing A. aeolicus NtrC1 receiver, central and DNA binding domains | Descriptor: | Transcriptional regulator (NtrC family) | Authors: | Vidangos, N.K, Maris, A.E, Young, A, Hong, E, Pelton, J.G, Batchelor, J.D, Wemmer, D.E. | Deposit date: | 2013-06-09 | Release date: | 2013-08-28 | Last modified: | 2013-10-23 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Structure, function, and tethering of DNA-binding domains in sigma (54) transcriptional activators. Biopolymers, 99, 2013
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4L9M
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![BU of 4l9m by Molmil](/molmil-images/mine/4l9m) | Autoinhibited state of the Ras-specific exchange factor RasGRP1 | Descriptor: | CITRIC ACID, GLYCEROL, RAS guanyl-releasing protein 1, ... | Authors: | Iwig, J.S, Vercoulen, Y, Das, R, Barros, T, Limnander, A, Che, Y, Pelton, J.G, Wemmer, D.E, Roose, J.P, Kuriyan, J. | Deposit date: | 2013-06-18 | Release date: | 2013-08-21 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | Structural analysis of autoinhibition in the Ras-specific exchange factor RasGRP1. Elife, 2, 2013
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4L5E
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![BU of 4l5e by Molmil](/molmil-images/mine/4l5e) | Crystal structure of A. aeolicus NtrC1 DNA binding domain | Descriptor: | SULFATE ION, Transcriptional regulator (NtrC family) | Authors: | Young, A, Maris, A.E, Vidangos, N.K, Hong, E, Pelton, J.G, Batchelor, J.D, Wemmer, D.E. | Deposit date: | 2013-06-10 | Release date: | 2013-08-28 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (1.34 Å) | Cite: | Structure, function, and tethering of DNA-binding domains in sigma (54) transcriptional activators. Biopolymers, 99, 2013
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4L9U
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![BU of 4l9u by Molmil](/molmil-images/mine/4l9u) | Structure of C-terminal coiled coil of RasGRP1 | Descriptor: | GLYCEROL, RAS guanyl-releasing protein 1, SULFATE ION | Authors: | Iwig, J.S, Vercoulen, Y, Das, R, Barros, T, Limnander, A, Che, Y, Pelton, J.G, Wemmer, D.E, Roose, J.P, Kuriyan, J. | Deposit date: | 2013-06-18 | Release date: | 2013-08-21 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (1.6014 Å) | Cite: | Structural analysis of autoinhibition in the Ras-specific exchange factor RasGRP1. Elife, 2, 2013
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2JMP
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2KIC
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![BU of 2kic by Molmil](/molmil-images/mine/2kic) | n-NafY. N-terminal domain of NafY | Descriptor: | Nitrogenase gamma subunit | Authors: | Phillips, A.H, Hernandez, J.A, Erbil, K, Pelton, J.G, Wemmer, D.E, Rubio, L.M. | Deposit date: | 2009-05-01 | Release date: | 2010-12-08 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Biological activity and solution structure of the apo-dinitrogenase binding domain of NafY J.Biol.Chem., 2010
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2MXD
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![BU of 2mxd by Molmil](/molmil-images/mine/2mxd) | Solution structure of VPg of porcine sapovirus | Descriptor: | Viral protein genome-linked | Authors: | Kim, J, Hwang, H, Min, H, Yun, H, Cho, K, Pelton, J.G, Wemmer, D.E, Lee, C. | Deposit date: | 2014-12-24 | Release date: | 2015-04-15 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Solution structure of the porcine sapovirus VPg core reveals a stable three-helical bundle with a conserved surface patch. Biochem.Biophys.Res.Commun., 459, 2015
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2O9L
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![BU of 2o9l by Molmil](/molmil-images/mine/2o9l) | AMBER refined NMR Structure of the Sigma-54 RpoN Domain Bound to the-24 Promoter Element | Descriptor: | 5'-D(*GP*AP*AP*AP*CP*GP*TP*GP*CP*CP*AP*AP*AP*A)-3', 5'-D(*TP*TP*TP*TP*GP*GP*CP*AP*CP*GP*TP*TP*TP*C)-3', RNA polymerase sigma factor RpoN | Authors: | Doucleff, M, Pelton, J.G, Lee, P.S, Wemmer, D.E. | Deposit date: | 2006-12-13 | Release date: | 2007-07-17 | Last modified: | 2023-12-27 | Method: | SOLUTION NMR | Cite: | Structural basis of DNA recognition by the alternative sigma-factor, sigma54. J.Mol.Biol., 369, 2007
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2O8K
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![BU of 2o8k by Molmil](/molmil-images/mine/2o8k) | NMR Structure of the Sigma-54 RpoN Domain Bound to the-24 Promoter Element | Descriptor: | 5'-D(*GP*AP*AP*AP*CP*GP*TP*GP*CP*CP*AP*AP*AP*A)-3', 5'-D(*TP*TP*TP*TP*GP*GP*CP*AP*CP*GP*TP*TP*TP*C)-3', RNA polymerase sigma factor RpoN | Authors: | Doucleff, M, Pelton, J.G, Lee, P.S, Wemmer, D.E. | Deposit date: | 2006-12-12 | Release date: | 2007-07-17 | Last modified: | 2023-12-27 | Method: | SOLUTION NMR | Cite: | Structural basis of DNA recognition by the alternative sigma-factor, sigma54. J.Mol.Biol., 369, 2007
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1PA4
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![BU of 1pa4 by Molmil](/molmil-images/mine/1pa4) | Solution structure of a putative ribosome-binding factor from Mycoplasma pneumoniae (MPN156) | Descriptor: | Probable ribosome-binding factor A | Authors: | Rubin, S.M, Pelton, J.G, Yokota, H, Kim, R, Wemmer, D.E, Berkeley Structural Genomics Center (BSGC) | Deposit date: | 2003-05-13 | Release date: | 2004-03-02 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Solution structure of a putative ribosome binding protein from Mycoplasma pneumoniae and comparison to a distant homolog. J.STRUCT.FUNCT.GENOM., 4, 2003
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1ZDM
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![BU of 1zdm by Molmil](/molmil-images/mine/1zdm) | Crystal Structure of Activated CheY Bound to Xe | Descriptor: | Chemotaxis protein cheY, MANGANESE (II) ION, XENON | Authors: | Lowery, T.J, Doucleff, M, Ruiz, E.J, Rubin, S.M, Pines, A, Wemmer, D.E. | Deposit date: | 2005-04-14 | Release date: | 2005-04-26 | Last modified: | 2023-08-23 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Distinguishing multiple chemotaxis Y protein conformations with laser-polarized 129Xe NMR. Protein Sci., 14, 2005
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2LAI
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![BU of 2lai by Molmil](/molmil-images/mine/2lai) | |