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2A5M
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BU of 2a5m by Molmil
NMR structure of murine gamma-S crystallin from joint refinement with SAXS data
Descriptor: Gamma crystallin S
Authors:Grishaev, A, Wu, J, Trewhella, J, Bax, A.
Deposit date:2005-06-30
Release date:2005-07-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Refinement of Multidomain Protein Structures by Combination of Solution Small-Angle X-ray Scattering and NMR Data.
J.Am.Chem.Soc., 127, 2005
2K4C
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BU of 2k4c by Molmil
tRNAPhe-based homology model for tRNAVal refined against base N-H RDCs in two media and SAXS data
Descriptor: 76-MER
Authors:Grishaev, A, Ying, J, Canny, M.D, Pardi, A, Bax, A.
Deposit date:2008-06-04
Release date:2008-12-09
Last modified:2024-05-01
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Solution structure of tRNAVal from refinement of homology model against residual dipolar coupling and SAXS data.
J.Biomol.Nmr, 42, 2008
2JQX
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BU of 2jqx by Molmil
Solution structure of Malate Synthase G from joint refinement against NMR and SAXS data
Descriptor: Malate synthase G
Authors:Grishaev, A, Tugarinov, V, Kay, L.E, Trewhella, J, Bax, A.
Deposit date:2007-06-13
Release date:2007-07-10
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Refined solution structure of the 82-kDa enzyme malate synthase G from joint NMR and synchrotron SAXS restraints
J.Biomol.Nmr, 40, 2008
2N7J
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BU of 2n7j by Molmil
Sidechain chi1 distribution in B3 domain of protein G from extensive sets of residual dipolar couplings
Descriptor: Immunoglobulin G-binding protein G
Authors:Grishaev, A, Li, F, Ying, J, Bax, A.
Deposit date:2015-09-12
Release date:2015-10-14
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Side Chain Conformational Distributions of a Small Protein Derived from Model-Free Analysis of a Large Set of Residual Dipolar Couplings.
J.Am.Chem.Soc., 137, 2015
4D1Q
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BU of 4d1q by Molmil
Hermes transposase bound to its terminal inverted repeat
Descriptor: SODIUM ION, TERMINAL INVERTED REPEAT, TRANSPOSASE
Authors:Hickman, A.B, Ewis, H, Li, X, Knapp, J, Laver, T, Doss, A.L, Tolun, G, Steven, A, Grishaev, A, Bax, A, Atkinson, P, Craig, N.L, Dyda, F.
Deposit date:2014-05-04
Release date:2014-07-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural Basis of Hat Transposon End Recognition by Hermes, an Octameric DNA Transposase from Musca Domestica.
Cell(Cambridge,Mass.), 158, 2014
1CXW
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BU of 1cxw by Molmil
THE SECOND TYPE II MODULE FROM HUMAN MATRIX METALLOPROTEINASE 2
Descriptor: HUMAN MATRIX METALLOPROTEINASE 2
Authors:Briknarova, K, Grishaev, A, Banyai, L, Tordai, H, Patthy, L, Llinas, M.
Deposit date:1999-08-31
Release date:1999-11-12
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:The second type II module from human matrix metalloproteinase 2: structure, function and dynamics.
Structure Fold.Des., 7, 1999
5I1R
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BU of 5i1r by Molmil
Quantitative characterization of configurational space sampled by HIV-1 nucleocapsid using solution NMR and X-ray scattering
Descriptor: Nucleocapsid protein p7, ZINC ION
Authors:Deshmukh, L, Schwieters, C.D, Grishaev, A, Clore, G.M.
Deposit date:2016-02-05
Release date:2016-03-30
Last modified:2024-05-15
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Quantitative Characterization of Configurational Space Sampled by HIV-1 Nucleocapsid Using Solution NMR, X-ray Scattering and Protein Engineering.
Chemphyschem, 17, 2016
2XDF
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BU of 2xdf by Molmil
Solution Structure of the Enzyme I Dimer Complexed with HPr Using Residual Dipolar Couplings and Small Angle X-Ray Scattering
Descriptor: PHOSPHOCARRIER PROTEIN HPR, PHOSPHOENOLPYRUVATE-PROTEIN PHOSPHOTRANSFERASE
Authors:Schwieters, C.D, Suh, J.-Y, Grishaev, A, Guirlando, R, Takayama, Y, Clore, G.M.
Deposit date:2010-04-30
Release date:2010-09-22
Last modified:2024-05-15
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Solution Structure of the 128 kDa Enzyme I Dimer from Escherichia Coli and its 146 kDa Complex with Hpr Using Residual Dipolar Couplings and Small- and Wide-Angle X-Ray Scattering.
J.Am.Chem.Soc., 132, 2010
2MJB
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BU of 2mjb by Molmil
Solution nmr structure of ubiquitin refined against dipolar couplings in 4 media
Descriptor: Ubiquitin-60S ribosomal protein L40
Authors:Maltsev, A, Grishaev, A, Roche, J, Zasloff, M, Bax, A.
Deposit date:2014-01-02
Release date:2014-03-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Improved cross validation of a static ubiquitin structure derived from high precision residual dipolar couplings measured in a drug-based liquid crystalline phase.
J.Am.Chem.Soc., 136, 2014
2JWL
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BU of 2jwl by Molmil
Solution Structure of periplasmic domain of TolR from H. influenzae with SAXS data
Descriptor: Protein tolR
Authors:Parsons, L.M, Bax, A, Grishaev, A.
Deposit date:2007-10-15
Release date:2008-04-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The Periplasmic Domain of TolR from Haemophilus influenzae Forms a Dimer with a Large Hydrophobic Groove: NMR Solution Structure and Comparison to SAXS Data.
Biochemistry, 47, 2008
2MK3
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BU of 2mk3 by Molmil
Solution NMR structure of gp41 ectodomain monomer on a DPC micelle
Descriptor: Transmembrane glycoprotein, chimeric construct
Authors:Roche, J, Louis, J.M, Grishaev, A, Ying, J, Bax, A.
Deposit date:2014-01-23
Release date:2014-02-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Dissociation of the trimeric gp41 ectodomain at the lipid-water interface suggests an active role in HIV-1 Env-mediated membrane fusion.
Proc.Natl.Acad.Sci.USA, 111, 2014
2KX9
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BU of 2kx9 by Molmil
Solution Structure of the Enzyme I dimer Using Residual Dipolar Couplings and Small Angle X-Ray Scattering
Descriptor: Phosphoenolpyruvate-protein phosphotransferase
Authors:Schwieters, C.D, Suh, J, Grishaev, A, Takayama, Y, Guirlando, R, Clore, G.
Deposit date:2010-04-29
Release date:2010-09-15
Last modified:2024-05-01
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Solution structure of the 128 kDa enzyme I dimer from Escherichia coli and its 146 kDa complex with HPr using residual dipolar couplings and small- and wide-angle X-ray scattering.
J.Am.Chem.Soc., 132, 2010
2M8P
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BU of 2m8p by Molmil
The structure of the W184AM185A mutant of the HIV-1 capsid protein
Descriptor: Capsid protein p24
Authors:Deshmukh, L, Schwieters, C.D, Grishaev, A, Clore, G, Ghirlando, R.
Deposit date:2013-05-24
Release date:2013-11-20
Last modified:2024-10-16
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Structure and Dynamics of Full-Length HIV-1 Capsid Protein in Solution.
J.Am.Chem.Soc., 135, 2013
2M8N
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BU of 2m8n by Molmil
HIV-1 capsid monomer structure
Descriptor: Capsid protein p24
Authors:Deshmukh, L, Schwieters, C.D, Grishaev, A, Clore, G, Ghirlando, R.
Deposit date:2013-05-24
Release date:2013-11-20
Last modified:2023-06-14
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Structure and Dynamics of Full-Length HIV-1 Capsid Protein in Solution.
J.Am.Chem.Soc., 135, 2013
2N5T
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BU of 2n5t by Molmil
Ensemble solution structure of the phosphoenolpyruvate-Enzyme I complex from the bacterial phosphotransferase system
Descriptor: Phosphoenolpyruvate-protein phosphotransferase
Authors:Venditti, V, Schwieters, C.D, Grishaev, A, Clore, G.
Deposit date:2015-07-28
Release date:2015-09-02
Last modified:2024-05-01
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Dynamic equilibrium between closed and partially closed states of the bacterial Enzyme I unveiled by solution NMR and X-ray scattering.
Proc.Natl.Acad.Sci.USA, 112, 2015
2KNF
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BU of 2knf by Molmil
Solution structure and functional characterization of human plasminogen kringle 5
Descriptor: Plasminogen
Authors:Battistel, M.D, Grishaev, A, An, S.A, Castellino, F.J, Llinas, M.
Deposit date:2009-08-21
Release date:2009-10-27
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Solution structure and functional characterization of human plasminogen kringle 5.
Biochemistry, 48, 2009
2M8L
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BU of 2m8l by Molmil
HIV capsid dimer structure
Descriptor: Capsid protein p24
Authors:Deshmukh, L, Schwieters, C.D, Grishaev, A, Clore, G, Ghirlando, R.
Deposit date:2013-05-23
Release date:2013-11-20
Last modified:2024-10-30
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Structure and Dynamics of Full-Length HIV-1 Capsid Protein in Solution.
J.Am.Chem.Soc., 135, 2013
2L5H
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BU of 2l5h by Molmil
Solution Structure of the H189Q mutant of the Enzyme I dimer Using Residual Dipolar Couplings and Small Angle X-Ray Scattering
Descriptor: Phosphoenolpyruvate-protein phosphotransferase
Authors:Takayama, Y.D, Schwieters, C.D, Grishaev, A, Guirlando, R, Clore, G.
Deposit date:2010-11-01
Release date:2011-01-12
Last modified:2024-05-01
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Combined Use of Residual Dipolar Couplings and Solution X-ray Scattering To Rapidly Probe Rigid-Body Conformational Transitions in a Non-phosphorylatable Active-Site Mutant of the 128 kDa Enzyme I Dimer.
J.Am.Chem.Soc., 133, 2011
2LV6
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BU of 2lv6 by Molmil
The complex between Ca-Calmodulin and skeletal muscle myosin light chain kinase from combination of NMR and aqueous and contrast-matched SAXS data
Descriptor: CALCIUM ION, Calmodulin, Myosin light chain kinase 2, ...
Authors:Grishaev, A.V, Anthis, N.J, Clore, G.M.
Deposit date:2012-06-29
Release date:2013-02-20
Last modified:2024-05-01
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Contrast-matched small-angle X-ray scattering from a heavy-atom-labeled protein in structure determination: application to a lead-substituted calmodulin-peptide complex.
J.Am.Chem.Soc., 134, 2012
6B67
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BU of 6b67 by Molmil
Human PP2Calpha (PPM1A) complexed with cyclic peptide c(MpSIpYVA)
Descriptor: CALCIUM ION, Protein phosphatase 1A, cyclic peptide c(MpSIpYVA)
Authors:Dyda, F, Kosek, D.
Deposit date:2017-10-01
Release date:2018-04-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A trapped human PPM1A-phosphopeptide complex reveals structural features critical for regulation of PPM protein phosphatase activity.
J. Biol. Chem., 293, 2018
6UWT
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BU of 6uwt by Molmil
Clostridium difficile binary toxin translocase CDTb tetradecamer in symmetric conformation
Descriptor: ADP-ribosyltransferase binding component, CALCIUM ION
Authors:Xu, X, Pozharski, E, des Georges, A.
Deposit date:2019-11-05
Release date:2020-01-22
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of the cell-binding component of theClostridium difficilebinary toxin reveals a di-heptamer macromolecular assembly.
Proc.Natl.Acad.Sci.USA, 117, 2020
6UWR
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BU of 6uwr by Molmil
Clostridium difficile binary toxin translocase CDTb in asymmetric tetradecamer conformation
Descriptor: ADP-ribosyltransferase binding component, CALCIUM ION
Authors:Xu, X, Pozharski, E, des Georges, A.
Deposit date:2019-11-05
Release date:2020-01-22
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structure of the cell-binding component of theClostridium difficilebinary toxin reveals a di-heptamer macromolecular assembly.
Proc.Natl.Acad.Sci.USA, 117, 2020
6UWI
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BU of 6uwi by Molmil
Crystal structure of the Clostridium difficile translocase CDTb
Descriptor: ADP-ribosyltransferase binding component, CALCIUM ION
Authors:Pozharski, E.
Deposit date:2019-11-05
Release date:2020-01-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structure of the cell-binding component of theClostridium difficilebinary toxin reveals a di-heptamer macromolecular assembly.
Proc.Natl.Acad.Sci.USA, 117, 2020
6UWO
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BU of 6uwo by Molmil
Crystal structure of receptor binding domain 2 from Clostridium difficile translocase CDTb
Descriptor: ADP-ribosyltransferase binding component
Authors:Pozharski, E.
Deposit date:2019-11-05
Release date:2020-01-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the cell-binding component of theClostridium difficilebinary toxin reveals a di-heptamer macromolecular assembly.
Proc.Natl.Acad.Sci.USA, 117, 2020
2GBH
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BU of 2gbh by Molmil
NMR structure of stem region of helix-35 of 23S E.coli ribosomal RNA (residues 736-760)
Descriptor: 5'-R(*(GMP)P*GP*GP*CP*UP*AP*AP*UP*GP*(PSU)P*UP*GP*AP*AP*AP*AP*AP*UP*UP*AP*GP*CP*CP*C)-3'
Authors:Bax, A, Boisbouvier, J, Bryce, D, Grishaev, A, Jaroniec, C, Miclet, E, Nikonovicz, E, O'Neil-Cabello, E, Ying, J.
Deposit date:2006-03-10
Release date:2006-04-11
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Measurement of five dipolar couplings from a single 3D NMR multiplet applied to the study of RNA dynamics.
J.Am.Chem.Soc., 126, 2004

 

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