Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2ZBK
DownloadVisualize
BU of 2zbk by Molmil
Crystal structure of an intact type II DNA topoisomerase: insights into DNA transfer mechanisms
Descriptor: RADICICOL, Type 2 DNA topoisomerase 6 subunit B, Type II DNA topoisomerase VI subunit A
Authors:Graille, M, Cladiere, L, Durand, D, Lecointe, F, Forterre, P, van Tilbeurgh, H, Paris-Sud Yeast Structural Genomics (YSG)
Deposit date:2007-10-22
Release date:2008-02-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.56 Å)
Cite:Crystal Structure of an Intact Type II DNA Topoisomerase: Insights into DNA Transfer Mechanisms
Structure, 16, 2008
3KF9
DownloadVisualize
BU of 3kf9 by Molmil
Crystal structure of the SdCen/skMLCK complex
Descriptor: CALCIUM ION, Caltractin, Myosin light chain kinase 2, ...
Authors:Radu, L, Assairi, L, Blouquit, Y, Durand, D, Miron, S, Charbonnier, J.B, Craescu, C.T.
Deposit date:2009-10-27
Release date:2011-01-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural features of the complexes formed by Scherffelia dubia centrin
To be Published
2VDU
DownloadVisualize
BU of 2vdu by Molmil
Structure of trm8-trm82, THE YEAST TRNA m7G methylation complex
Descriptor: PHOSPHATE ION, TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE, TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-ASSOCIATED WD REPEAT PROTEIN TRM82
Authors:Leulliot, N, Chaillet, M, Durand, D, Ulryck, N, Blondeau, K, Van Tilbeurgh, H.
Deposit date:2007-10-11
Release date:2007-12-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the Yeast tRNA M7G Methylation Complex.
Structure, 16, 2008
2VDV
DownloadVisualize
BU of 2vdv by Molmil
Structure of trm8, m7G methylation enzyme
Descriptor: S-ADENOSYLMETHIONINE, TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE
Authors:Leulliot, N, Chaillet, M, Durand, D, Ulryck, N, Blondeau, K, Van Tilbeurgh, H.
Deposit date:2007-10-11
Release date:2007-12-18
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the Yeast tRNA M7G Methylation Complex.
Structure, 16, 2008
2W9M
DownloadVisualize
BU of 2w9m by Molmil
Structure of family X DNA polymerase from Deinococcus radiodurans
Descriptor: MERCURY (II) ION, POLYMERASE X, ZINC ION
Authors:Leulliot, N, Cladiere, L, Lecointe, F, Durand, D, Hubscher, U, van Tilbeurgh, H.
Deposit date:2009-01-27
Release date:2009-02-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:The Family X DNA Polymerase from Deinococcus Radioduran Adopts a Non-Standard Extended Conformation.
J.Biol.Chem., 284, 2009
4CBV
DownloadVisualize
BU of 4cbv by Molmil
X-ray structure of full-length ComE from Streptococcus pneumoniae.
Descriptor: COME
Authors:Boudes, M, Durand, D, Graille, M, van Tilbeurgh, H, Quevillon-Cheruel, S.
Deposit date:2013-10-16
Release date:2014-02-12
Last modified:2014-05-14
Method:X-RAY DIFFRACTION (3.39 Å)
Cite:Structural Insights Into the Dimerization of the Response Regulator Come from Streptococcus Pneumoniae.
Nucleic Acids Res., 42, 2014
3P27
DownloadVisualize
BU of 3p27 by Molmil
Crystal structure of S. cerevisiae Hbs1 protein (GDP-bound form), a translational GTPase involved in RNA quality control pathways and interacting with Dom34/Pelota
Descriptor: Elongation factor 1 alpha-like protein, GUANOSINE-5'-DIPHOSPHATE
Authors:van den Elzen, A, Henri, J, Lazar, N, Gas, M.E, Durand, D, Lacroute, F, Nicaise, M, van Tilbeurgh, H, Sraphin, B, Graille, M, Paris-Sud Yeast Structural Genomics (YSG)
Deposit date:2010-10-01
Release date:2010-11-17
Last modified:2012-03-14
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Dissection of Dom34-Hbs1 reveals independent functions in two RNA quality control pathways.
Nat.Struct.Mol.Biol., 17, 2010
3P26
DownloadVisualize
BU of 3p26 by Molmil
Crystal structure of S. cerevisiae Hbs1 protein (apo-form), a translational GTPase involved in RNA quality control pathways and interacting with Dom34/Pelota
Descriptor: Elongation factor 1 alpha-like protein
Authors:van den Elzen, A, Henri, J, Lazar, N, Gas, M.E, Durand, D, Lacroute, F, Nicaise, M, van Tilbeurgh, H, Sraphin, B, Graille, M, Paris-Sud Yeast Structural Genomics (YSG)
Deposit date:2010-10-01
Release date:2010-11-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Dissection of Dom34-Hbs1 reveals independent functions in two RNA quality control pathways.
Nat.Struct.Mol.Biol., 17, 2010
6GWJ
DownloadVisualize
BU of 6gwj by Molmil
Human OSGEP / LAGE3 / GON7 complex
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, EKC/KEOPS complex subunit GON7, ...
Authors:Missoury, S, Liger, D, Durand, D, Collinet, B, Tilbeurgh, V.H.
Deposit date:2018-06-25
Release date:2019-07-03
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Defects in t 6 A tRNA modification due to GON7 and YRDC mutations lead to Galloway-Mowat syndrome.
Nat Commun, 10, 2019
4ML3
DownloadVisualize
BU of 4ml3 by Molmil
X-ray structure of ComE D58A REC domain from Streptococcus pneumoniae
Descriptor: Response regulator
Authors:Boudes, M, Sanchez, D, Durand, D, Graille, M, van Tilbeurgh, H, Quevillon-Cheruel, S.
Deposit date:2013-09-06
Release date:2014-02-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural insights into the dimerization of the response regulator ComE from Streptococcus pneumoniae.
Nucleic Acids Res., 42, 2014
4MLD
DownloadVisualize
BU of 4mld by Molmil
X-ray structure of ComE D58E REC domain from Streptococcus pneumoniae
Descriptor: Response regulator
Authors:Boudes, M, Sanchez, D, Durand, D, Graille, M, van Tilbeurgh, H, Quevillon-Cheruel, S.
Deposit date:2013-09-06
Release date:2014-02-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Structural insights into the dimerization of the response regulator ComE from Streptococcus pneumoniae.
Nucleic Acids Res., 42, 2014
4AKK
DownloadVisualize
BU of 4akk by Molmil
Structure of the NasR transcription antiterminator
Descriptor: 1,2-ETHANEDIOL, NITRATE REGULATORY PROTEIN
Authors:Boudes, M, Lazar, N, Graille, M, Durand, D, Gaidenko, T.A, Stewart, V, van Tilbeurgh, H.
Deposit date:2012-02-24
Release date:2012-06-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.145 Å)
Cite:The Structure of the Nasr Transcription Antiterminator Reveals a One-Component System with a Nit Nitrate Receptor Coupled to an Antar RNA-Binding Effector.
Mol.Microbiol., 85, 2012
4AK8
DownloadVisualize
BU of 4ak8 by Molmil
Structure of F241L mutant of langerin carbohydrate recognition domain.
Descriptor: C-TYPE LECTIN DOMAIN FAMILY 4 MEMBER K, CALCIUM ION, CHLORIDE ION, ...
Authors:Chabrol, E, Thepaut, M, Dezutter-Dambuyant, C, Vives, C, Marcoux, J, Kahn, R, Valadeau-Guilemond, J, Vachette, P, Durand, D, Fieschi, F.
Deposit date:2012-02-22
Release date:2013-04-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Alteration of the Langerin Oligomerization State Affects Birbeck Granule Formation.
Biophys.J., 108, 2015
6GW7
DownloadVisualize
BU of 6gw7 by Molmil
The CTD of HpDprA, a DNA binding Winged Helix domain which do not bind dsDNA
Descriptor: DNA protecting protein DprA
Authors:Lisboa, J, Celma, L, Sanchez, D, Marquis, M, Andreani, J, Guerois, R, Ochsenbein, F, Durand, D, Marsin, S, Cuniasse, P, Radicella, J.P, Quevillon-Cheruel, S.
Deposit date:2018-06-22
Release date:2019-04-24
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:The C-terminal domain of HpDprA is a DNA-binding winged helix domain that does not bind double-stranded DNA.
Febs J., 286, 2019
4A8E
DownloadVisualize
BU of 4a8e by Molmil
The structure of a dimeric Xer recombinase from archaea
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, PROBABLE TYROSINE RECOMBINASE XERC-LIKE, ...
Authors:Brooks, M.A, ElArnaout, T, Duranda, D, Lisboa, J, Lazar, N, Raynal, B, vanTilbeurgh, H, Serre, M, Quevillon-Cheruel, S.
Deposit date:2011-11-21
Release date:2012-12-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:The Carboxy-Terminal Alpha N Helix of the Archaeal Xera Tyrosine Recombinase is a Molecular Switch to Control Site-Specific Recombination.
Plos One, 8, 2013
4YDU
DownloadVisualize
BU of 4ydu by Molmil
Crystal structure of E. coli YgjD-YeaZ heterodimer in complex with ADP
Descriptor: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, FE (III) ION, ...
Authors:Zhang, W, Collinet, B, Perrochia, L, Durand, D, Van Tilbeurgh, H.
Deposit date:2015-02-23
Release date:2015-03-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:The ATP-mediated formation of the YgjD-YeaZ-YjeE complex is required for the biosynthesis of tRNA t6A in Escherichia coli.
Nucleic Acids Res., 43, 2015
4ZV6
DownloadVisualize
BU of 4zv6 by Molmil
Crystal structure of the artificial alpharep-7 octarellinV.1 complex
Descriptor: AlphaRep-7, Octarellin V.1
Authors:Figueroa, M, Sleutel, M, Urvoas, A, Valerio-Lepiniec, M, Minard, P, Martial, J.A, van de Weerdt, C.
Deposit date:2015-05-18
Release date:2016-05-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:The unexpected structure of the designed protein Octarellin V.1 forms a challenge for protein structure prediction tools.
J.Struct.Biol., 195, 2016
3LTJ
DownloadVisualize
BU of 3ltj by Molmil
Structure of a new family of artificial alpha helicoidal repeat proteins (alpha-Rep) based on thermostable HEAT-like repeats
Descriptor: AlphaRep-4
Authors:Urvoas, A, Guellouz, A, Graille, M, van Tilbeurgh, H, Desmadril, M, Minard, P.
Deposit date:2010-02-16
Release date:2010-10-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Design, production and molecular structure of a new family of artificial alpha-helicoidal repeat proteins ( alpha Rep) based on thermostable HEAT-like repeats
J.Mol.Biol., 404, 2010
8A46
DownloadVisualize
BU of 8a46 by Molmil
Crystal structure of the human Kelch domain of Keap1 in complex with compound S217879
Descriptor: 2-[(1S,2R,8S)-2,4,32-trimethyl-28,28-bis(oxidanylidene)-19,22,27-trioxa-28$l^{6}-thia-1,14,15,16-tetrazahexacyclo[21.5.3.1^{3,7}.1^{9,13}.0^{12,16}.0^{26,30}]tritriaconta-3(33),4,6,9(32),10,12,14,23,25,30-decaen-8-yl]ethanoic acid, Kelch-like ECH-associated protein 1
Authors:Weber, C, Vuillard, L, Delerive, P, Miallau, L.
Deposit date:2022-06-10
Release date:2022-07-13
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.323 Å)
Cite:Selective disruption of NRF2-KEAP1 interaction leads to NASH resolution and reduction of liver fibrosis in mice.
JHEP Rep, 5, 2023
6NAK
DownloadVisualize
BU of 6nak by Molmil
BACTERIAL PROTEIN COMPLEX TM BDE complex
Descriptor: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MAGNESIUM ION, TsaE, ...
Authors:Stec, B.
Deposit date:2018-12-05
Release date:2023-04-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.14 Å)
Cite:Discovery of the Universal tRNA Binding Mode for the TsaD-like Components of the t6A tRNA Modification Pathway
Biophysica, 3, 2023
6YNU
DownloadVisualize
BU of 6ynu by Molmil
CaM-P458 complex (crystal form 1)
Descriptor: Bifunctional adenylate cyclase toxin/hemolysin CyaA, CALCIUM ION, Calmodulin-1
Authors:Mechaly, A.E, Voegele, A, Haouz, A, Chenal, A.
Deposit date:2020-04-14
Release date:2021-03-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.12 Å)
Cite:A High-Affinity Calmodulin-Binding Site in the CyaA Toxin Translocation Domain is Essential for Invasion of Eukaryotic Cells.
Adv Sci, 8, 2021
6YNS
DownloadVisualize
BU of 6yns by Molmil
CaM-P458 complex (crystal form 2)
Descriptor: Bifunctional adenylate cyclase toxin/hemolysin CyaA, CALCIUM ION, Calmodulin-1
Authors:Mechaly, A.E, Voegele, A, Haouz, A, Chenal, A.
Deposit date:2020-04-14
Release date:2021-03-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.94 Å)
Cite:A High-Affinity Calmodulin-Binding Site in the CyaA Toxin Translocation Domain is Essential for Invasion of Eukaryotic Cells.
Adv Sci, 8, 2021
5BOP
DownloadVisualize
BU of 5bop by Molmil
Crystal structure of the artificial nanobody octarellinV.1 complex
Descriptor: Nanobody, Octarellin V.1
Authors:Figueroa, M, Sleutel, M, Pardon, E, Steyaert, J, Martial, J.A, van de Weerdt, C.
Deposit date:2015-05-27
Release date:2016-05-25
Last modified:2016-06-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The unexpected structure of the designed protein Octarellin V.1 forms a challenge for protein structure prediction tools.
J.Struct.Biol., 195, 2016
7ZPF
DownloadVisualize
BU of 7zpf by Molmil
Three-dimensional structure of AIP56, a short-trip single chain AB toxin from Photobacterium damselae subsp. piscicida.
Descriptor: Aip56, GLYCEROL, NICKEL (II) ION, ...
Authors:Lisboa, J, Pereira, P.J.B, dos Santos, N.M.S.
Deposit date:2022-04-27
Release date:2023-05-10
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Unconventional structure and mechanisms for membrane interaction and translocation of the NF-kappa B-targeting toxin AIP56.
Nat Commun, 14, 2023
5DCQ
DownloadVisualize
BU of 5dcq by Molmil
Crystal structure of bacterial adhesin, FNE from Streptococcus equi spp. equi.
Descriptor: FORMIC ACID, Fibronectin-binding protein, artificial repeat proteins (alphaREP3)
Authors:Tiouajni, M, Graille, M, van Tilbeurgh, H.
Deposit date:2015-08-24
Release date:2016-06-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural and functional analysis of the fibronectin-binding protein FNE from Streptococcus equi spp. equi.
FEBS J., 281, 2014

 

123>

222624

数据于2024-07-17公开中

PDB statisticsPDBj update infoContact PDBjnumon