Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4KX7
DownloadVisualize
BU of 4kx7 by Molmil
Crystal structure of human aminopeptidase A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yang, Y, Liu, C, Lin, Y.Y, Li, F.
Deposit date:2013-05-24
Release date:2013-07-31
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural insights into central hypertension regulation by human aminopeptidase a.
J.Biol.Chem., 288, 2013
4KXA
DownloadVisualize
BU of 4kxa by Molmil
Crystal structure of human aminopeptidase A complexed with aspartate and calcium
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yang, Y, Liu, C, Lin, Y.Y, Li, F.
Deposit date:2013-05-24
Release date:2013-07-31
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insights into central hypertension regulation by human aminopeptidase a.
J.Biol.Chem., 288, 2013
4KX9
DownloadVisualize
BU of 4kx9 by Molmil
Crystal structure of human aminopeptidase A complexed with arginine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yang, Y, Liu, C, Lin, Y.Y, Li, F.
Deposit date:2013-05-24
Release date:2013-07-31
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural insights into central hypertension regulation by human aminopeptidase a.
J.Biol.Chem., 288, 2013
4L3N
DownloadVisualize
BU of 4l3n by Molmil
Crystal structure of the receptor-binding domain from newly emerged Middle East respiratory syndrome coronavirus
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, S protein
Authors:Chen, Y, Rajashankar, K.R, Yang, Y, Agnihothram, S.S, Liu, C, Lin, Y.-L, Baric, R.S, Li, F.
Deposit date:2013-06-06
Release date:2013-07-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Crystal structure of the receptor-binding domain from newly emerged middle East respiratory syndrome coronavirus.
J.Virol., 87, 2013
4KXC
DownloadVisualize
BU of 4kxc by Molmil
Crystal structure of human aminopeptidase A complexed with glutamate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yang, Y, Liu, C, Lin, Y.Y, Li, F.
Deposit date:2013-05-25
Release date:2013-07-31
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insights into central hypertension regulation by human aminopeptidase a.
J.Biol.Chem., 288, 2013
4KXD
DownloadVisualize
BU of 4kxd by Molmil
Crystal structure of human aminopeptidase A complexed with glutamate and calcium
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yang, Y, Liu, C, Lin, Y.Y, Li, F.
Deposit date:2013-05-25
Release date:2013-07-31
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural insights into central hypertension regulation by human aminopeptidase a.
J.Biol.Chem., 288, 2013
4LNP
DownloadVisualize
BU of 4lnp by Molmil
The first SH3 domain from CAP/Ponsin in complex with proline rich peptide from Vinculin
Descriptor: Sorbin and SH3 domain-containing protein 1, Vinculin
Authors:Zhao, D, Li, F, Wu, J, Shi, Y, Zhang, Z, Gong, Q.
Deposit date:2013-07-11
Release date:2014-05-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Structural investigation of the interaction between the tandem SH3 domains of c-Cbl-associated protein and vinculin
J.Struct.Biol., 187, 2014
4LN2
DownloadVisualize
BU of 4ln2 by Molmil
The second SH3 domain from CAP/Ponsin in complex with proline rich peptide from Vinculin
Descriptor: Sorbin and SH3 domain-containing protein 1, proline rich peptide
Authors:Zhao, D, Li, F, Wu, J, Shi, Y, Zhang, Z, Gong, Q.
Deposit date:2013-07-11
Release date:2014-05-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structural investigation of the interaction between the tandem SH3 domains of c-Cbl-associated protein and vinculin
J.Struct.Biol., 187, 2014
6IYA
DownloadVisualize
BU of 6iya by Molmil
Structure of the DNA binding domain of antitoxin CopASO
Descriptor: Transcriptional regulator CopG family
Authors:Zhao, R, Li, F, Liu, L, Zhang, X.
Deposit date:2018-12-14
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure and allosteric coupling of type II antitoxin CopASO.
Biochem.Biophys.Res.Commun., 514, 2019
8J23
DownloadVisualize
BU of 8j23 by Molmil
Cryo-EM structure of FFAR2 complex in apo state
Descriptor: Free fatty acid receptor 2, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Tai, L, Li, F, Sun, X, Tang, W, Wang, J.
Deposit date:2023-04-14
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Molecular recognition and activation mechanism of short chain fatty acid receptors FFAR2 and FFAR3
To Be Published
7TGW
DownloadVisualize
BU of 7tgw by Molmil
Omicron spike at 3.0 A (open form)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Ye, G, Liu, B, Li, F.
Deposit date:2022-01-09
Release date:2022-03-09
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structure of a SARS-CoV-2 omicron spike protein ectodomain.
Nat Commun, 13, 2022
7TGX
DownloadVisualize
BU of 7tgx by Molmil
Prototypic SARS-CoV-2 G614 spike (open form)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, alpha-D-mannopyranose, ...
Authors:Ye, G, Liu, B, Li, F.
Deposit date:2022-01-09
Release date:2022-03-09
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of a SARS-CoV-2 omicron spike protein ectodomain.
Nat Commun, 13, 2022
7TGY
DownloadVisualize
BU of 7tgy by Molmil
Prototypic SARS-CoV-2 G614 spike (closed form)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Ye, G, Liu, B, Li, F.
Deposit date:2022-01-09
Release date:2022-03-09
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structure of a SARS-CoV-2 omicron spike protein ectodomain.
Nat Commun, 13, 2022
7U0N
DownloadVisualize
BU of 7u0n by Molmil
Crystal structure of chimeric omicron RBD (strain BA.1) complexed with human ACE2
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Geng, Q, Shi, K, Ye, G, Zhang, W, Aihara, H, Li, F.
Deposit date:2022-02-18
Release date:2022-03-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structural Basis for Human Receptor Recognition by SARS-CoV-2 Omicron Variant BA.1.
J.Virol., 96, 2022
7UFL
DownloadVisualize
BU of 7ufl by Molmil
Crystal structure of chimeric omicron RBD (strain BA.2) complexed with chimeric mouse ACE2
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, W, Shi, K, Geng, Q, Ye, G, Aihara, H, Li, F.
Deposit date:2022-03-22
Release date:2022-10-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Structural basis for mouse receptor recognition by SARS-CoV-2 omicron variant.
Proc.Natl.Acad.Sci.USA, 119, 2022
7UFK
DownloadVisualize
BU of 7ufk by Molmil
Crystal structure of chimeric omicron RBD (strain BA.2) complexed with human ACE2
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, W, Shi, K, Geng, Q, Ye, G, Aihara, H, Li, F.
Deposit date:2022-03-22
Release date:2022-10-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Structural basis for mouse receptor recognition by SARS-CoV-2 omicron variant.
Proc.Natl.Acad.Sci.USA, 119, 2022
7KM5
DownloadVisualize
BU of 7km5 by Molmil
Crystal structure of SARS-CoV-2 RBD complexed with Nanosota-1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Spike protein S1, ...
Authors:Ye, G, Shi, K, Aihara, H, Li, F.
Deposit date:2020-11-02
Release date:2021-08-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:The development of Nanosota - 1 as anti-SARS-CoV-2 nanobody drug candidates.
Elife, 10, 2021
7SZ6
DownloadVisualize
BU of 7sz6 by Molmil
Kinetically trapped Pseudomonas-phage PaP3 portal protein - delta barrel mutant class-3
Descriptor: Portal protein
Authors:Hou, C.-F.D, Swanson, N.A, Li, F, Yang, R, Lokareddy, R.K, Cingolani, G.
Deposit date:2021-11-25
Release date:2022-03-30
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (6.24 Å)
Cite:Cryo-EM Structure of a Kinetically Trapped Dodecameric Portal Protein from the Pseudomonas-phage PaP3.
J.Mol.Biol., 434, 2022
7SZ4
DownloadVisualize
BU of 7sz4 by Molmil
Kinetically trapped Pseudomonas-phage PaP3 portal protein - delta barrel mutant class-2
Descriptor: Portal protein
Authors:Hou, C.-F.D, Swanson, N.A, Li, F, Yang, R, Lokareddy, R.K, Cingolani, G.
Deposit date:2021-11-25
Release date:2022-03-30
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Cryo-EM Structure of a Kinetically Trapped Dodecameric Portal Protein from the Pseudomonas-phage PaP3.
J.Mol.Biol., 434, 2022
7SXK
DownloadVisualize
BU of 7sxk by Molmil
Kinetically trapped Pseudomonas-phage PaP3 portal protein - Full Length
Descriptor: Portal protein
Authors:Hou, C.F.D, Swanson, N.A, Li, F, Yang, R, Lokareddy, R.K, Cingolani, G.
Deposit date:2021-11-23
Release date:2022-04-20
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM Structure of a Kinetically Trapped Dodecameric Portal Protein from the Pseudomonas-phage PaP3.
J.Mol.Biol., 434, 2022
7SYA
DownloadVisualize
BU of 7sya by Molmil
Kinetically trapped Pseudomonas-phage PaP3 portal protein - Full Length
Descriptor: Portal protein
Authors:Hou, C.F.D, Swanson, N.A, Li, F, Yang, R, Lokareddy, R.K, Cingolani, G.
Deposit date:2021-11-24
Release date:2022-04-20
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM Structure of a Kinetically Trapped Dodecameric Portal Protein from the Pseudomonas-phage PaP3.
J.Mol.Biol., 434, 2022
6J2P
DownloadVisualize
BU of 6j2p by Molmil
Crystal structure of Saccharomyces cerevisiae Spp1 in complex with H3K4me3
Descriptor: COMPASS component SPP1, Histone H3, ZINC ION
Authors:He, C, Li, F.
Deposit date:2019-01-02
Release date:2019-09-11
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural basis for histone H3K4me3 recognition by the N-terminal domain of the PHD finger protein Spp1.
Biochem.J., 476, 2019
6J66
DownloadVisualize
BU of 6j66 by Molmil
Chondroitin sulfate/dermatan sulfate endolytic 4-O-sulfatase
Descriptor: CALCIUM ION, Chondroitin sulfate/dermatan sulfate 4-O-endosulfatase protein
Authors:Gu, L, Li, F, Su, T, Wang, S.
Deposit date:2019-01-14
Release date:2019-07-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.953 Å)
Cite:Comparative Study of Two Chondroitin Sulfate/Dermatan Sulfate 4-O-Sulfatases With High Identity.
Front Microbiol, 10, 2019
6J7J
DownloadVisualize
BU of 6j7j by Molmil
Crystal structure of Pseudomonas aeruginosa Earp
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Pseudomonas aeruginosa Earp
Authors:He, C, Li, F.
Deposit date:2019-01-18
Release date:2019-05-15
Last modified:2019-06-26
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Complex Structure ofPseudomonas aeruginosaArginine Rhamnosyltransferase EarP with Its Acceptor Elongation Factor P.
J.Bacteriol., 201, 2019
6J7K
DownloadVisualize
BU of 6j7k by Molmil
Crystal structure of Pseudomonas aeruginosa Earp in complex with TDP-Rha
Descriptor: 2'-DEOXY-THYMIDINE-BETA-L-RHAMNOSE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Pseudomonas aeruginosa Earp
Authors:He, C, Li, F.
Deposit date:2019-01-18
Release date:2019-05-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Complex Structure ofPseudomonas aeruginosaArginine Rhamnosyltransferase EarP with Its Acceptor Elongation Factor P.
J.Bacteriol., 201, 2019

220760

数据于2024-06-05公开中

PDB statisticsPDBj update infoContact PDBjnumon