4KXC

Crystal structure of human aminopeptidase A complexed with glutamate

Summary for 4KXC

• Entry DOI: 10.2210/pdb4kxc/pdb
• Related: 4KX7 4KX8 4KX9 4KXA 4KXB 4KXD
• Related PRD ID: PRD_900017
• Descriptor: Glutamyl aminopeptidase, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... (7 entities in total)
• Functional Keywords: zinc-aminopeptidase, hydrolase
• Biological source: Homo sapiens (human)
• Total number of polymer chains: 1
• Total formula weight: 106530.42

Authors

Yang, Y.,Liu, C.,Lin, Y.Y.,Li, F. (deposition date: 2013-05-25, release date: 2013-07-31, Last modification date: 2024-11-20)

Primary citation

Yang, Y.,Liu, C.,Lin, Y.L.,Li, F.
Structural insights into central hypertension regulation by human aminopeptidase a.
J.Biol.Chem., 288:25638-25645, 2013

PubMed Abstract: Hypertension is regulated through both the central and systemic renin-angiotensin systems. In the central renin-angiotensin system, zinc-dependent aminopeptidase A (APA) up-regulates blood pressure by specifically cleaving the N-terminal aspartate, but not the adjacent arginine, from angiotensin II, a process facilitated by calcium. Here, we determined the crystal structures of human APA and its complexes with different ligands and identified a calcium-binding site in the S1 pocket of APA. Without calcium, the S1 pocket can bind both acidic and basic residues through formation of salt bridges with the charged side chains. In the presence of calcium, the binding of acidic residues is enhanced as they ligate the cation, whereas the binding of basic residues is no longer favorable due to charge repulsion. Of the peptidomimetic inhibitors of APA, amastatin has higher potency than bestatin by fitting better in the S1 pocket and interacting additionally with the S3' subsite. These results explain the calcium-modulated substrate specificity of APA in central hypertension regulation and can guide the design and development of brain-targeting antihypertensive APA inhibitors.

PubMed: 23888046
DOI: 10.1074/jbc.M113.494955

Experimental method

X-RAY DIFFRACTION (2.4 Å)