Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6IXW
DownloadVisualize
BU of 6ixw by Molmil
pCBH ParM non-polymerisable quadruple mutant
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, pCBH ParM
Authors:Koh, F, Popp, D, Narita, A, Robinson, R.C.
Deposit date:2018-12-12
Release date:2019-06-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.253 Å)
Cite:The structure of a 15-stranded actin-like filament from Clostridium botulinum.
Nat Commun, 10, 2019
5YJ9
DownloadVisualize
BU of 5yj9 by Molmil
Crystal structure of Tribolium castaneum PINK1 kinase domain in complex with AMP-PNP
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Serine/threonine-protein kinase PINK1, ...
Authors:Okatsu, K, Sato, Y, Fukai, S.
Deposit date:2017-10-09
Release date:2018-07-25
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Structural insights into ubiquitin phosphorylation by PINK1.
Sci Rep, 8, 2018
5WVO
DownloadVisualize
BU of 5wvo by Molmil
Crystal structure of DNMT1 RFTS domain in complex with K18/K23 mono-ubiquitylated histone H3
Descriptor: DNA (cytosine-5)-methyltransferase 1, Histone H3.1, Ubiquitin, ...
Authors:Ishiyama, S, Nishiyama, A, Nakanishi, M, Arita, K.
Deposit date:2016-12-28
Release date:2017-11-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:Structure of the Dnmt1 Reader Module Complexed with a Unique Two-Mono-Ubiquitin Mark on Histone H3 Reveals the Basis for DNA Methylation Maintenance
Mol. Cell, 68, 2017
7X59
DownloadVisualize
BU of 7x59 by Molmil
A CBg-ParM filament with GTP or GDPPi
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, ParM/StbA family protein
Authors:Koh, A, Ali, S, Robinson, R, Narita, A.
Deposit date:2022-03-04
Release date:2023-03-08
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:A new actin-like filament from Clostridium botulinum exhibits a new system of filament turn over
To Be Published
7X56
DownloadVisualize
BU of 7x56 by Molmil
A CBg-ParM filament with ADP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ParM/StbA family protein
Authors:Koh, A, Ali, S, Robinson, R, Narita, A.
Deposit date:2022-03-04
Release date:2023-03-08
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:A new actin-like filament from Clostridium botulinum exhibits a new system of filament turn over
To Be Published
7X55
DownloadVisualize
BU of 7x55 by Molmil
A CBg-ParM filament with GTP and a short incubation time
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, ParM/StbA family protein
Authors:Koh, A, Ali, S, Robinson, R, Narita, A.
Deposit date:2022-03-04
Release date:2023-03-08
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (8.6 Å)
Cite:A new actin-like filament from Clostridium botulinum exhibits a new system of filament turn over
To Be Published
7X54
DownloadVisualize
BU of 7x54 by Molmil
A CBg-ParM filament with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ParM/StbA family protein
Authors:Koh, A, Ali, S, Robinson, R, Narita, A.
Deposit date:2022-03-04
Release date:2023-03-08
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:A new actin-like filament from Clostridium botulinum exhibits a new system of filament turn over
To Be Published
1V7A
DownloadVisualize
BU of 1v7a by Molmil
Crystal structures of adenosine deaminase complexed with potent inhibitors
Descriptor: 1-{(1R,2S)-2-HYDROXY-1-[2-(2-NAPHTHYLOXY)ETHYL]PROPYL}-1H-IMIDAZONE-4-CARBOXAMIDE, ZINC ION, adenosine deaminase
Authors:Kinoshita, T.
Deposit date:2003-12-14
Release date:2004-12-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-based design and synthesis of non-nucleoside, potent, and orally bioavailable adenosine deaminase inhibitors
J.Med.Chem., 47, 2004
1V79
DownloadVisualize
BU of 1v79 by Molmil
Crystal structures of adenosine deaminase complexed with potent inhibitors
Descriptor: 1-{(1R,2S)-1-[2-(2,3,-DICHLOROPHENYL)ETHYL]-2-HYDROXYPROPYL}-1H-IMIDAZOLE-4-CARBOXAMIDE, Adenosine deaminase, ZINC ION
Authors:Kinoshita, T.
Deposit date:2003-12-14
Release date:2004-12-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-based design and synthesis of non-nucleoside, potent, and orally bioavailable adenosine deaminase inhibitors
J.Med.Chem., 47, 2004
1G4B
DownloadVisualize
BU of 1g4b by Molmil
CRYSTAL STRUCTURES OF THE HSLVU PEPTIDASE-ATPASE COMPLEX REVEAL AN ATP-DEPENDENT PROTEOLYSIS MECHANISM
Descriptor: ATP-DEPENDENT HSL PROTEASE ATP-BINDING SUBUNIT HSLU, ATP-DEPENDENT PROTEASE HSLV
Authors:Wang, J, Song, J.J, Franklin, M.C, Kamtekar, S, Im, Y.J, Rho, S.H, Seong, I.S, Lee, C.S, Chung, C.H, Eom, S.H.
Deposit date:2000-10-26
Release date:2001-02-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (7 Å)
Cite:Crystal structures of the HslVU peptidase-ATPase complex reveal an ATP-dependent proteolysis mechanism.
Structure, 9, 2001
1G4A
DownloadVisualize
BU of 1g4a by Molmil
CRYSTAL STRUCTURES OF THE HSLVU PEPTIDASE-ATPASE COMPLEX REVEAL AN ATP-DEPENDENT PROTEOLYSIS MECHANISM
Descriptor: 2'-DEOXYADENOSINE-5'-DIPHOSPHATE, ATP-DEPENDENT HSL PROTEASE ATP-BINDING SUBUNIT HSLU, ATP-DEPENDENT PROTEASE HSLV
Authors:Wang, J, Song, J.J, Franklin, M.C, Kamtekar, S, Im, Y.J, Rho, S.H, Seong, I.S, Lee, C.S, Chung, C.H, Eom, S.H.
Deposit date:2000-10-26
Release date:2001-02-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of the HslVU peptidase-ATPase complex reveal an ATP-dependent proteolysis mechanism.
Structure, 9, 2001
5XPU
DownloadVisualize
BU of 5xpu by Molmil
Crystal structure of MAD2L2/REV7 in complex with a CAMP fragment in a monoclinic crystal
Descriptor: Chromosome alignment-maintaining phosphoprotein 1, Mitotic spindle assembly checkpoint protein MAD2B
Authors:Hara, K, Taharazako, S, Hashimoto, H.
Deposit date:2017-06-05
Release date:2017-09-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.304 Å)
Cite:Dynamic feature of mitotic arrest deficient 2-like protein 2 (MAD2L2) and structural basis for its interaction with chromosome alignment-maintaining phosphoprotein (CAMP).
J. Biol. Chem., 292, 2017
5XPT
DownloadVisualize
BU of 5xpt by Molmil
Crystal structure of MAD2L2/REV7 in complex with a CAMP fragment in a tetragonal crystal
Descriptor: Chromosome alignment-maintaining phosphoprotein 1, Mitotic spindle assembly checkpoint protein MAD2B
Authors:Hara, K, Taharazako, S, Hashimoto, H.
Deposit date:2017-06-05
Release date:2017-09-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Dynamic feature of mitotic arrest deficient 2-like protein 2 (MAD2L2) and structural basis for its interaction with chromosome alignment-maintaining phosphoprotein (CAMP).
J. Biol. Chem., 292, 2017
7W51
DownloadVisualize
BU of 7w51 by Molmil
Crystal structure of fragmin domain-1 in complex with actin (ADP-form)
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Actin, ...
Authors:Takeda, S.
Deposit date:2021-11-29
Release date:2022-10-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structures and mechanisms of actin ATP hydrolysis.
Proc.Natl.Acad.Sci.USA, 119, 2022
7W4Z
DownloadVisualize
BU of 7w4z by Molmil
Crystal structure of fragmin domain-1 in complex with actin (AMPPNP-form)
Descriptor: 1,2-ETHANEDIOL, Actin, alpha skeletal muscle, ...
Authors:Takeda, S.
Deposit date:2021-11-29
Release date:2022-10-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structures and mechanisms of actin ATP hydrolysis.
Proc.Natl.Acad.Sci.USA, 119, 2022
7W50
DownloadVisualize
BU of 7w50 by Molmil
Crystal structure of fragmin domain-1 in complex with actin (ADP-Pi-form)
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Actin, ...
Authors:Takeda, S.
Deposit date:2021-11-29
Release date:2022-10-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structures and mechanisms of actin ATP hydrolysis.
Proc.Natl.Acad.Sci.USA, 119, 2022
7W52
DownloadVisualize
BU of 7w52 by Molmil
Crystal structure of fragmin domain-1 (15-160) in complex with actin
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Takeda, S.
Deposit date:2021-11-29
Release date:2022-10-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structures and mechanisms of actin ATP hydrolysis.
Proc.Natl.Acad.Sci.USA, 119, 2022
1V5W
DownloadVisualize
BU of 1v5w by Molmil
Crystal structure of the human Dmc1 protein
Descriptor: Meiotic recombination protein DMC1/LIM15 homolog
Authors:Kinebuchi, T, Kagawa, W, Enomoto, R, Ikawa, S, Shibata, T, Kurumizaka, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-11-26
Release date:2004-05-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for octameric ring formation and DNA interaction of the human homologous-pairing protein dmc1
Mol.Cell, 14, 2004
7YNE
DownloadVisualize
BU of 7yne by Molmil
Crystal structure of fragmin domain-1 (1-160) in complex with G-form actin
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Takeda, S.
Deposit date:2022-07-30
Release date:2022-10-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structures and mechanisms of actin ATP hydrolysis.
Proc.Natl.Acad.Sci.USA, 119, 2022
2E1W
DownloadVisualize
BU of 2e1w by Molmil
Crystal structure of adenosine deaminase complexed with potent inhibitors
Descriptor: 1-{(1R,2S)-2-HYDROXY-1-[2-(1-NAPHTHYL)ETHYL]PROPYL}-1H-IMIDAZOLE-4-CARBOXAMIDE, Adenosine deaminase, ZINC ION
Authors:Kinoshita, T.
Deposit date:2006-10-30
Release date:2006-11-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-Based Design and Synthesis of Non-Nucleoside, Potent, and Orally Bioavailable Adenosine Deaminase Inhibitors
J.Med.Chem., 47, 2004
7Y13
DownloadVisualize
BU of 7y13 by Molmil
Cryo-EM structure of apo-state MrgD-Gi complex (local)
Descriptor: PALMITIC ACID, Soluble cytochrome b562,Mas-related G-protein coupled receptor member D
Authors:Suzuki, S, Iida, M, Kawamoto, A, Oshima, A.
Deposit date:2022-06-06
Release date:2022-07-20
Last modified:2022-11-23
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insight into the activation mechanism of MrgD with heterotrimeric Gi-protein revealed by cryo-EM.
Commun Biol, 5, 2022
7Y12
DownloadVisualize
BU of 7y12 by Molmil
Cryo-EM structure of MrgD-Gi complex with beta-alanine
Descriptor: BETA-ALANINE, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Suzuki, S, Iida, M, Kawamoto, A, Oshima, A.
Deposit date:2022-06-06
Release date:2022-07-20
Last modified:2023-02-15
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insight into the activation mechanism of MrgD with heterotrimeric Gi-protein revealed by cryo-EM.
Commun Biol, 5, 2022
7Y14
DownloadVisualize
BU of 7y14 by Molmil
Cryo-EM structure of MrgD-Gi complex with beta-alanine (local)
Descriptor: BETA-ALANINE, PALMITIC ACID, Soluble cytochrome b562,Mas-related G-protein coupled receptor member D
Authors:Suzuki, S, Iida, M, Kawamoto, A, Oshima, A.
Deposit date:2022-06-06
Release date:2022-07-20
Last modified:2022-11-23
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insight into the activation mechanism of MrgD with heterotrimeric Gi-protein revealed by cryo-EM.
Commun Biol, 5, 2022
7Y15
DownloadVisualize
BU of 7y15 by Molmil
Cryo-EM structure of apo-state MrgD-Gi complex
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Suzuki, S, Iida, M, Kawamoto, A, Oshima, A.
Deposit date:2022-06-06
Release date:2022-07-20
Last modified:2022-11-23
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural insight into the activation mechanism of MrgD with heterotrimeric Gi-protein revealed by cryo-EM.
Commun Biol, 5, 2022
1UML
DownloadVisualize
BU of 1uml by Molmil
Crystal structure of adenosine deaminase complexed with a potent inhibitor FR233624
Descriptor: 1-((1R)-1-(HYDROXYMETHYL)-3-{6-[(3-PHENYLPROPANOYL)AMINO]-1H-INDOL-1-YL}PROPYL)-1H-IMIDAZOLE-4-CARBOXAMIDE, Adenosine deaminase, ZINC ION
Authors:Kinoshita, T.
Deposit date:2003-10-03
Release date:2004-09-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-based design, synthesis, and structure-activity relationship studies of novel non-nucleoside adenosine deaminase inhibitors
J.Med.Chem., 47, 2004

222624

数据于2024-07-17公开中

PDB statisticsPDBj update infoContact PDBjnumon