3SH3
 
 | | Crystal structure of a pro-inflammatory lectin from the seeds of Dioclea wilsonii STANDL | | Descriptor: | 5-bromo-4-chloro-1H-indol-3-yl alpha-D-mannopyranoside, CALCIUM ION, CHLORIDE ION, ... | | Authors: | Rangel, T.B.A, Rocha, B.A.M, Bezerra, G.A, Bezerra, M.J.B, Nascimento, K.S, Nagano, C.S, Sampaio, A.H, Assreuy, A.M.S, Gruber, K, Delatorre, P, Cavada, B.S. | | Deposit date: | 2011-06-15 | | Release date: | 2011-10-05 | | Last modified: | 2024-02-28 | | Method: | X-RAY DIFFRACTION (2.3 Å) | | Cite: | Crystal structure of a pro-inflammatory lectin from the seeds of Dioclea wilsonii Standl.
Biochimie, 94, 2012
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8ADX
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8B30
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3T6J
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3T6B
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3AX4
 | | Three-dimensional structure of lectin from Dioclea violacea and comparative vasorelaxant effects with Dioclea rostrata | | Descriptor: | 5-bromo-4-chloro-1H-indol-3-yl alpha-D-mannopyranoside, CALCIUM ION, MANGANESE (II) ION, ... | | Authors: | Bezerra, M.J.B, Bezerra, G.A, Martins, J.L, Nascimento, K.S, Nagano, C.S, Gruber, K, Assereuy, A.M, Delatorre, P, Rocha, B.A.M, Cavada, B.S. | | Deposit date: | 2011-03-29 | | Release date: | 2012-04-04 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (2.613 Å) | | Cite: | Crystal structure of Dioclea violacea lectin and a comparative study of vasorelaxant properties with Dioclea rostrata lectin
Int.J.Biochem.Cell Biol., 45, 2013
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4XTM
 | | Crystal structure of a recombinant Vatairea macrocarpa seed lectin complexed with GalNAc | | Descriptor: | 2-acetamido-2-deoxy-alpha-D-galactopyranose, CALCIUM ION, CITRIC ACID, ... | | Authors: | Sousa, B.L, Silva-Filho, J.C, Kumar, P, Lyskowski, A, Bezerra, G.A, Delatorre, P, Rocha, B.A.M, Cunha, R.M.S, Nagano, C.S, Gruber, K, Cavada, B.S. | | Deposit date: | 2015-01-23 | | Release date: | 2016-01-27 | | Last modified: | 2024-02-28 | | Method: | X-RAY DIFFRACTION (2.7 Å) | | Cite: | Crystal structure of a recombinant Vatairea macrocarpa seed lectin
Int.J.Biochem.Cell Biol., 2016
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4XTP
 | | Crystal structure of a recombinant Vatairea macrocarpa seed lectin complexed with Tn antigen | | Descriptor: | 2-acetamido-2-deoxy-alpha-D-galactopyranose, CALCIUM ION, CITRIC ACID, ... | | Authors: | Sousa, B.L, Silva-Filho, J.C, Kumar, P, Lyskowski, A, Bezerra, G.A, Delatorre, P, Rocha, B.A.M, Cunha, R.M.S, Nagano, C.S, Gruber, K, Cavada, B.S. | | Deposit date: | 2015-01-23 | | Release date: | 2016-01-27 | | Last modified: | 2023-09-27 | | Method: | X-RAY DIFFRACTION (1.97 Å) | | Cite: | Crystal structure of a recombinant Vatairea macrocarpa seed lectin
Int.J.Biochem.Cell Biol., 2016
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4XXA
 | | Crystal structure of a recombinant Vatairea macrocarpa seed lectin | | Descriptor: | CALCIUM ION, GLYCEROL, MANGANESE (II) ION, ... | | Authors: | Sousa, B.L, Silva-Filho, J.C, Kumar, P, Lyskowski, A, Bezerra, G.A, Delatorre, P, Rocha, B.A.M, Cunha, R.M.S, Nagano, C.S, Gruber, K, Cavada, B.S. | | Deposit date: | 2015-01-30 | | Release date: | 2016-01-27 | | Last modified: | 2023-09-27 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | Crystal structure of a recombinant Vatairea macrocarpa seed lectin
Int.J.Biochem.Cell Biol., 2016
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5EB4
 | | The crystal structure of almond HNL, PaHNL5 V317A, expressed in Aspergillus niger | | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ... | | Authors: | Pavkov-Keller, T, Steinkellner, G, Gruber, K. | | Deposit date: | 2015-10-17 | | Release date: | 2016-04-20 | | Last modified: | 2024-01-10 | | Method: | X-RAY DIFFRACTION (2.3 Å) | | Cite: | Structures of almond hydroxynitrile lyase isoenzyme 5 provide a rationale for the lack of oxidoreductase activity in flavin dependent HNLs.
J.Biotechnol., 235, 2016
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3D2J
 | | Structure of berberine bridge enzyme from Eschscholzia californica, tetragonal crystal form | | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, ... | | Authors: | Winkler, A, Lyskowski, A, Macheroux, P, Gruber, K. | | Deposit date: | 2008-05-08 | | Release date: | 2008-10-28 | | Last modified: | 2020-07-29 | | Method: | X-RAY DIFFRACTION (2.05 Å) | | Cite: | A concerted mechanism for berberine bridge enzyme
Nat.Chem.Biol., 4, 2008
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5D79
 | | Structure of BBE-like #28 from Arabidopsis thaliana | | Descriptor: | Berberine bridge enzyme-like protein, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ... | | Authors: | Daniel, B, Kumar, P, Gruber, K. | | Deposit date: | 2015-08-13 | | Release date: | 2016-06-22 | | Last modified: | 2024-01-10 | | Method: | X-RAY DIFFRACTION (1.849 Å) | | Cite: | Structure of a Berberine Bridge Enzyme-Like Enzyme with an Active Site Specific to the Plant Family Brassicaceae.
Plos One, 11, 2016
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5E33
 | | Structure of human DPP3 in complex with met-enkephalin | | Descriptor: | Dipeptidyl peptidase 3, MAGNESIUM ION, Met-enkephalin, ... | | Authors: | Kumar, P, Reithofer, V, Reisinger, M, Pavkov-Keller, T, Wallner, S, Macheroux, P, Gruber, K. | | Deposit date: | 2015-10-01 | | Release date: | 2016-04-13 | | Last modified: | 2024-01-10 | | Method: | X-RAY DIFFRACTION (1.837 Å) | | Cite: | Substrate complexes of human dipeptidyl peptidase III reveal the mechanism of enzyme inhibition.
Sci Rep, 6, 2016
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5E3A
 | | Structure of human DPP3 in complex with opioid peptide leu-enkephalin | | Descriptor: | Dipeptidyl peptidase 3, Leu-enkephalin, MAGNESIUM ION, ... | | Authors: | Kumar, P, Reithofer, V, Reisinger, M, Pavkov-Keller, T, Wallner, S, Macheroux, P, Gruber, K. | | Deposit date: | 2015-10-02 | | Release date: | 2016-04-13 | | Last modified: | 2024-01-10 | | Method: | X-RAY DIFFRACTION (2.05 Å) | | Cite: | Substrate complexes of human dipeptidyl peptidase III reveal the mechanism of enzyme inhibition.
Sci Rep, 6, 2016
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5E3C
 | | Structure of human DPP3 in complex with hemorphin like opioid peptide IVYPW | | Descriptor: | Dipeptidyl peptidase 3, IVYPW, MAGNESIUM ION, ... | | Authors: | Kumar, P, Reithofer, V, Reisinger, M, Pavkov-Keller, T, Wallner, S, Macheroux, P, Gruber, K. | | Deposit date: | 2015-10-02 | | Release date: | 2016-04-13 | | Last modified: | 2024-01-10 | | Method: | X-RAY DIFFRACTION (2.765 Å) | | Cite: | Substrate complexes of human dipeptidyl peptidase III reveal the mechanism of enzyme inhibition.
Sci Rep, 6, 2016
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5E2Q
 | | Structure of human DPP3 in complex with angiotensin-II | | Descriptor: | Dipeptidyl peptidase 3, MAGNESIUM ION, POTASSIUM ION, ... | | Authors: | Kumar, P, Reisinger, M, Reithofer, V, Gruber, K. | | Deposit date: | 2015-10-01 | | Release date: | 2016-04-13 | | Last modified: | 2024-01-10 | | Method: | X-RAY DIFFRACTION (2.404 Å) | | Cite: | Substrate complexes of human dipeptidyl peptidase III reveal the mechanism of enzyme inhibition.
Sci Rep, 6, 2016
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3D2H
 | | Structure of berberine bridge enzyme from Eschscholzia californica, monoclinic crystal form | | Descriptor: | (2R,3S,4S)-5-[(4R)-6',7'-dimethyl-2,3',5-trioxo-1'H-spiro[imidazolidine-4,2'-quinoxalin]-4'(3'H)-yl]-2,3,4-trihydroxypentyl-adenosine diphosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ... | | Authors: | Winkler, A, Lyskowski, A, Macheroux, P, Gruber, K. | | Deposit date: | 2008-05-08 | | Release date: | 2008-10-28 | | Last modified: | 2020-07-29 | | Method: | X-RAY DIFFRACTION (1.65 Å) | | Cite: | A concerted mechanism for berberine bridge enzyme
Nat.Chem.Biol., 4, 2008
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5EGY
 | | Structure of ligand free human DPP3 in closed form. | | Descriptor: | Dipeptidyl peptidase 3, MAGNESIUM ION, ZINC ION | | Authors: | Kumar, P, Reithofer, V, Reisinger, M, Pavkov-Keller, T, Wallner, S, Macheroux, P, Gruber, K. | | Deposit date: | 2015-10-27 | | Release date: | 2016-04-13 | | Last modified: | 2024-01-10 | | Method: | X-RAY DIFFRACTION (2.741 Å) | | Cite: | Substrate complexes of human dipeptidyl peptidase III reveal the mechanism of enzyme inhibition.
Sci Rep, 6, 2016
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3CSK
 | | Structure of DPP III from Saccharomyces cerevisiae | | Descriptor: | MAGNESIUM ION, Probable dipeptidyl-peptidase 3, ZINC ION | | Authors: | Baral, P.K, Jajcanin, N, Deller, S, Macheroux, P, Abramic, M, Gruber, K. | | Deposit date: | 2008-04-10 | | Release date: | 2008-06-10 | | Last modified: | 2024-05-29 | | Method: | X-RAY DIFFRACTION (1.95 Å) | | Cite: | The first structure of dipeptidyl-peptidase III provides insight into the catalytic mechanism and mode of substrate binding.
J.Biol.Chem., 283, 2008
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5EHH
 | | Structure of human DPP3 in complex with endomorphin-2. | | Descriptor: | Dipeptidyl peptidase 3, Endomorphin-2, MAGNESIUM ION, ... | | Authors: | Kumar, P, Reithofer, V, Reisinger, M, Pavkov-Keller, T, Wallner, S, Macheroux, P, Gruber, K. | | Deposit date: | 2015-10-28 | | Release date: | 2016-04-13 | | Last modified: | 2024-01-10 | | Method: | X-RAY DIFFRACTION (2.38 Å) | | Cite: | Substrate complexes of human dipeptidyl peptidase III reveal the mechanism of enzyme inhibition.
Sci Rep, 6, 2016
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3D2D
 | | Structure of berberine bridge enzyme in complex with (S)-reticuline | | Descriptor: | (S)-reticuline, 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ... | | Authors: | Winkler, A, Lyskowski, A, Macheroux, P, Gruber, K. | | Deposit date: | 2008-05-08 | | Release date: | 2008-10-28 | | Last modified: | 2020-07-29 | | Method: | X-RAY DIFFRACTION (2.796 Å) | | Cite: | A concerted mechanism for berberine bridge enzyme
Nat.Chem.Biol., 4, 2008
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5EB5
 | | The crystal structure of almond HNL, PaHNL5 V317A, in complex with benzyl alcohol | | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ... | | Authors: | Pavkov-Keller, T, Steinkellner, G, Gruber, K. | | Deposit date: | 2015-10-17 | | Release date: | 2016-04-20 | | Last modified: | 2024-01-10 | | Method: | X-RAY DIFFRACTION (2.8 Å) | | Cite: | Structures of almond hydroxynitrile lyase isoenzyme 5 provide a rationale for the lack of oxidoreductase activity in flavin dependent HNLs.
J.Biotechnol., 235, 2016
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3DQZ
 | | Structure of the hydroxynitrile lyase from Arabidopsis thaliana | | Descriptor: | Alpha-hydroxynitrile lyase-like protein, CHLORIDE ION | | Authors: | Andexer, J, Staunig, N, Gruber, K. | | Deposit date: | 2008-07-10 | | Release date: | 2009-07-14 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (2.504 Å) | | Cite: | Hydroxynitrile lyases with alpha / beta-hydrolase fold: two enzymes with almost identical 3D structures but opposite enantioselectivities and different reaction mechanisms
Chembiochem, 13, 2012
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4J2P
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4K1Z
 | | Crystal structure of Canavalia boliviana lectin in complex with Man1-4Man-OMe | | Descriptor: | CADMIUM ION, CALCIUM ION, CHLORIDE ION, ... | | Authors: | Bezerra, G.A, Viertlmayr, R, Moura, T.R, Delatorre, P, Rocha, B.A.M, Cavada, B.S, Gruber, K. | | Deposit date: | 2013-04-07 | | Release date: | 2014-04-09 | | Last modified: | 2024-02-28 | | Method: | X-RAY DIFFRACTION (2.3 Å) | | Cite: | Structural Studies of an Anti-Inflammatory Lectin from Canavalia boliviana Seeds in Complex with Dimannosides.
Plos One, 9, 2014
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