Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7VQO
DownloadVisualize
BU of 7vqo by Molmil
Cryo-EM structure of Ams1 bound to the FW domain of Nbr1
Descriptor: Ams1, Nbr1 and malE fusion protein, ZINC ION
Authors:Zhang, J, Ye, K.
Deposit date:2021-10-20
Release date:2022-07-06
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.19 Å)
Cite:Structural mechanism of protein recognition by the FW domain of autophagy receptor Nbr1
Nat Commun, 13, 2022
7V5H
DownloadVisualize
BU of 7v5h by Molmil
VcOrn native structure with N terminal tag
Descriptor: Oligoribonuclease
Authors:Zhang, J, Zhang, Q, Bartlam, M.
Deposit date:2021-08-17
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of oligoribonuclease from Vibrio cholerae O1 El Tor with bound peptide.
Acta Crystallogr.,Sect.F, 77, 2021
7V9Z
DownloadVisualize
BU of 7v9z by Molmil
PaOrn Oligoribonuclease native structure
Descriptor: IMIDAZOLE, Oligoribonuclease, SULFATE ION
Authors:Zhang, J, Zhang, Q, Bartlam, M.
Deposit date:2021-08-27
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:PaOrn Oligoribonuclease native structure
To Be Published
7VA3
DownloadVisualize
BU of 7va3 by Molmil
PaOrn Oligoribonuclease D11A mutant with substrate pGpG complex structure
Descriptor: IMIDAZOLE, MANGANESE (II) ION, Oligoribonuclease, ...
Authors:Zhang, J, Zhang, Q, Bartlam, M.
Deposit date:2021-08-27
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:PaOrn Oligoribonuclease D11A mutant with substrate pGpG complex structure
To Be Published
7VA6
DownloadVisualize
BU of 7va6 by Molmil
PaOrn Oligoribonuclease D11A mutant with RNA GU complex structure
Descriptor: IMIDAZOLE, Oligoribonuclease, RNA (5'-R(P*GP*U)-3')
Authors:Zhang, J, Zhang, Q, Bartlam, M.
Deposit date:2021-08-27
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:PaOrn Oligoribonuclease D11A mutant with RNA GU complex structure
To Be Published
7VA2
DownloadVisualize
BU of 7va2 by Molmil
PaOrn Oligoribonuclease D11A mutant with product GMP complex structure
Descriptor: GUANOSINE-5'-MONOPHOSPHATE, IMIDAZOLE, Oligoribonuclease, ...
Authors:Zhang, J, Zhang, Q, Bartlam, M.
Deposit date:2021-08-27
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:PaOrn Oligoribonuclease D11A mutant with product GMP complex structure
To Be Published
7WNN
DownloadVisualize
BU of 7wnn by Molmil
Crystal structure of Imine Reductase from Actinoalloteichus hymeniacidonis in complex with NADPH
Descriptor: 3-hydroxyisobutyrate dehydrogenase-like beta-hydroxyacid dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Zhang, J, Chen, R, Gao, S.
Deposit date:2022-01-19
Release date:2022-04-06
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Tuning an Imine Reductase for the Asymmetric Synthesis of Azacycloalkylamines by Concise Structure-Guided Engineering.
Angew.Chem.Int.Ed.Engl., 61, 2022
7U8C
DownloadVisualize
BU of 7u8c by Molmil
Crystal structure of Mesothelin C-terminal peptide-MORAb 15B6 FAB complex
Descriptor: MORab 15B6 Fab heavy chain, MORab 15B6 Fab light chain, Mesothelin, ...
Authors:Zhan, J, Esser, L, Xia, D.
Deposit date:2022-03-08
Release date:2022-06-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Highly active CAR T cells that bind to a juxtamembrane region of mesothelin and are not blocked by shed mesothelin.
Proc.Natl.Acad.Sci.USA, 119, 2022
8XAI
DownloadVisualize
BU of 8xai by Molmil
Crystal structure of Protease CPAVM1 in Bacillus subtilis LjM2
Descriptor: Lipoprotein
Authors:Zhang, J, Wang, C.Y.
Deposit date:2023-12-04
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Anti-influenza activity of CPAVM1 protease secreted by Bacillus subtilis LjM2.
Antiviral Res., 2024
5N8C
DownloadVisualize
BU of 5n8c by Molmil
Crystal structure of Pseudomonas aeruginosa LpxC complexed with inhibitor
Descriptor: (2~{S})-3-azanyl-2-[[(1~{R})-5-[2-[4-[[2-(hydroxymethyl)imidazol-1-yl]methyl]phenyl]ethynyl]-2,3-dihydro-1~{H}-inden-1-yl]amino]-3-methyl-~{N}-oxidanyl-butanamide, CHLORIDE ION, UDP-3-O-acyl-N-acetylglucosamine deacetylase, ...
Authors:Cross, J.B, Ryan, M.D, Zhang, J, Cheng, R.K, Wood, M, Andersen, O.A, Brooks, M, Kwong, J, Barker, J.
Deposit date:2017-02-23
Release date:2017-03-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-based discovery of LpxC inhibitors.
Bioorg. Med. Chem. Lett., 27, 2017
6IRF
DownloadVisualize
BU of 6irf by Molmil
Structure of the human GluN1/GluN2A NMDA receptor in the glutamate/glycine-bound state at pH 6.3, Class I
Descriptor: Glutamate receptor ionotropic, NMDA 1, NMDA 2A
Authors:Zhang, J, Chang, S, Zhang, X, Zhu, S.
Deposit date:2018-11-12
Release date:2019-01-16
Last modified:2019-06-05
Method:ELECTRON MICROSCOPY (5.1 Å)
Cite:Structural Basis of the Proton Sensitivity of Human GluN1-GluN2A NMDA Receptors
Cell Rep, 25, 2018
6IRH
DownloadVisualize
BU of 6irh by Molmil
Structure of the human GluN1/GluN2A NMDA receptor in the glutamate/glycine-bound state at pH 6.3, Class III
Descriptor: Glutamate receptor ionotropic, NMDA 1, NMDA 2A
Authors:Zhang, J, Chang, S, Zhang, X, Zhu, S.
Deposit date:2018-11-12
Release date:2019-01-16
Last modified:2019-06-05
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:Structural Basis of the Proton Sensitivity of Human GluN1-GluN2A NMDA Receptors
Cell Rep, 25, 2018
6IZ2
DownloadVisualize
BU of 6iz2 by Molmil
Crystal structure of DinB/YfiT protein DR0053 from D. radiodurans R1
Descriptor: ACETATE ION, DinB/YfiT family protein, ZINC ION
Authors:Kim, M.-K, Zhang, J, Zhao, L.
Deposit date:2018-12-18
Release date:2019-05-15
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.069 Å)
Cite:Crystal structure of the highly radiation-inducible DinB/YfiT superfamily protein DR0053 from Deinococcus radiodurans R1.
Biochem.Biophys.Res.Commun., 513, 2019
8FDW
DownloadVisualize
BU of 8fdw by Molmil
Cryo-EM structure of SARS-CoV-2 postfusion spike in membrane
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S2, ...
Authors:Zhang, J, Shi, W, Cai, Y.F, Zhu, H.S, Peng, H.Q, Voyer, J, Volloch, S.R, Cao, H, Mayer, M.L, Song, K.K, Xu, C, Lu, J.M, Chen, B.
Deposit date:2022-12-05
Release date:2023-05-10
Last modified:2023-07-26
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM structure of SARS-CoV-2 postfusion spike in membrane.
Nature, 619, 2023
5JRE
DownloadVisualize
BU of 5jre by Molmil
Crystal structure of NeC3PO in complex with ssDNA.
Descriptor: 9-METHYL-9H-PURIN-6-AMINE, ADENINE, NEQ131, ...
Authors:Gan, J, Zhang, J.
Deposit date:2016-05-06
Release date:2016-09-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for single-stranded RNA recognition and cleavage by C3PO
Nucleic Acids Res., 44, 2016
8FHN
DownloadVisualize
BU of 8fhn by Molmil
Cryo-EM structure of human NCC (class 2)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Polythiazide, Solute carrier family 12 member 2,Solute carrier family 12 member 3 chimera
Authors:Zhang, J, Fan, M, Feng, L.
Deposit date:2022-12-14
Release date:2023-02-15
Last modified:2023-03-08
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure and thiazide inhibition mechanism of the human Na-Cl cotransporter.
Nature, 614, 2023
8FHO
DownloadVisualize
BU of 8fho by Molmil
Cryo-EM structure of human NCC (class 1)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Polythiazide, SODIUM ION, ...
Authors:Zhang, J, Fan, M, Feng, L.
Deposit date:2022-12-14
Release date:2023-02-15
Last modified:2023-03-08
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Structure and thiazide inhibition mechanism of the human Na-Cl cotransporter.
Nature, 614, 2023
8FHR
DownloadVisualize
BU of 8fhr by Molmil
Cryo-EM structure of human NCC (class 3-3)
Descriptor: Polythiazide, SODIUM ION, Solute carrier family 12 member 2,Solute carrier family 12 member 3 chimera
Authors:Zhang, J, Fan, M, Feng, L.
Deposit date:2022-12-14
Release date:2023-02-15
Last modified:2023-03-08
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure and thiazide inhibition mechanism of the human Na-Cl cotransporter.
Nature, 614, 2023
8FHP
DownloadVisualize
BU of 8fhp by Molmil
Cryo-EM structure of human NCC (class 3-1)
Descriptor: Polythiazide, SODIUM ION, Solute carrier family 12 member 2,Solute carrier family 12 member 3 chimera
Authors:Zhang, J, Fan, M, Feng, L.
Deposit date:2022-12-14
Release date:2023-02-15
Last modified:2023-03-08
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Structure and thiazide inhibition mechanism of the human Na-Cl cotransporter.
Nature, 614, 2023
8FHT
DownloadVisualize
BU of 8fht by Molmil
Cryo-EM structure of human NCC
Descriptor: CHLORIDE ION, SODIUM ION, Solute carrier family 12 member 3
Authors:Zhang, J, Fan, M, Feng, L.
Deposit date:2022-12-15
Release date:2023-02-15
Last modified:2023-03-08
Method:ELECTRON MICROSCOPY (3.02 Å)
Cite:Structure and thiazide inhibition mechanism of the human Na-Cl cotransporter.
Nature, 614, 2023
8FHQ
DownloadVisualize
BU of 8fhq by Molmil
Cryo-EM structure of human NCC (class 3-2)
Descriptor: Polythiazide, SODIUM ION, Solute carrier family 12 member 2,Solute carrier family 12 member 3 chimera
Authors:Zhang, J, Fan, M, Feng, L.
Deposit date:2022-12-14
Release date:2023-02-15
Last modified:2023-03-08
Method:ELECTRON MICROSCOPY (2.81 Å)
Cite:Structure and thiazide inhibition mechanism of the human Na-Cl cotransporter.
Nature, 614, 2023
7SFR
DownloadVisualize
BU of 7sfr by Molmil
Unmethylated Mtb Ribosome 50S with SEQ-9
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Xing, Z, Cui, Z, Zhang, J, TB Structural Genomics Consortium (TBSGC)
Deposit date:2021-10-04
Release date:2022-10-12
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Discovery of natural-product-derived sequanamycins as potent oral anti-tuberculosis agents.
Cell, 186, 2023
4XNR
DownloadVisualize
BU of 4xnr by Molmil
Vibrio Vulnificus Adenine Riboswitch Aptamer Domain, Synthesized by Position-selective Labeling of RNA (PLOR), in Complex with Adenine
Descriptor: ADENINE, MAGNESIUM ION, Vibrio Vulnificus Adenine Riboswitch
Authors:Zhang, J, Liu, Y, Wang, Y.-X, Ferre-D'Amare, A.R.
Deposit date:2015-01-16
Release date:2015-05-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Synthesis and applications of RNAs with position-selective labelling and mosaic composition.
Nature, 522, 2015
7N1W
DownloadVisualize
BU of 7n1w by Molmil
Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, J, Cai, Y.F, Xiao, T.S, Rawson, S, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Volloch, S.R, Chen, B.
Deposit date:2021-05-28
Release date:2021-07-07
Last modified:2021-08-18
Method:ELECTRON MICROSCOPY (3.33 Å)
Cite:Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants.
Science, 373, 2021
7N1Y
DownloadVisualize
BU of 7n1y by Molmil
Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, J, Cai, Y.F, Xiao, T.S, Rawson, S, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Volloch, S.R, Chen, B.
Deposit date:2021-05-28
Release date:2021-07-07
Last modified:2021-08-18
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants.
Science, 373, 2021

221716

数据于2024-06-26公开中

PDB statisticsPDBj update infoContact PDBjnumon