6E80
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6E84
| Crystal structure of the Corn aptamer in complex with TO | Descriptor: | 1-methyl-4-[(Z)-(3-methyl-1,3-benzothiazol-2(3H)-ylidene)methyl]quinolin-1-ium, POTASSIUM ION, RNA (36-MER) | Authors: | Sjekloca, L, Ferre-D'Amare, A.R. | Deposit date: | 2018-07-27 | Release date: | 2019-07-31 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (2.901 Å) | Cite: | Binding between G Quadruplexes at the Homodimer Interface of the Corn RNA Aptamer Strongly Activates Thioflavin T Fluorescence. Cell Chem Biol, 26, 2019
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6E81
| Crystal structure of the Corn aptamer in complex with ThT | Descriptor: | 2-[4-(dimethylamino)phenyl]-3,6-dimethyl-1,3-benzothiazol-3-ium, POTASSIUM ION, RNA (36-MER) | Authors: | Sjekloca, L, Ferre-D'Amare, A.R. | Deposit date: | 2018-07-27 | Release date: | 2019-07-31 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (2.721 Å) | Cite: | Binding between G Quadruplexes at the Homodimer Interface of the Corn RNA Aptamer Strongly Activates Thioflavin T Fluorescence. Cell Chem Biol, 26, 2019
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1ZL3
| Coupling of active site motions and RNA binding | Descriptor: | 5'-R(*GP*GP*CP*AP*AP*CP*GP*GP*UP*(FLO) UP*CP*GP*AP*UP*CP*CP*CP*GP*UP*UP*GP*C)-3', SULFATE ION, tRNA pseudouridine synthase B | Authors: | Hoang, C, Hamilton, C.S, Mueller, E.G, Ferre-D'Amare, A.R. | Deposit date: | 2005-05-05 | Release date: | 2005-08-09 | Last modified: | 2023-08-23 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Precursor complex structure of pseudouridine synthase TruB suggests coupling of active site perturbations to an RNA-sequestering peripheral protein domain Protein Sci., 14, 2005
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2APO
| Crystal Structure of the Methanococcus jannaschii Cbf5 Nop10 Complex | Descriptor: | POTASSIUM ION, Probable tRNA pseudouridine synthase B, Ribosome biogenesis protein Nop10, ... | Authors: | Hamma, T, Reichow, S.L, Varani, G, Ferre-D'Amare, A.R. | Deposit date: | 2005-08-16 | Release date: | 2005-11-15 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | The Cbf5-Nop10 complex is a molecular bracket that organizes box H/ACA RNPs. Nat.Struct.Mol.Biol., 12, 2005
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2AQA
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2GCS
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2GCV
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2AQC
| NMR Structural analysis of archaeal Nop10 | Descriptor: | Ribosome biogenesis protein Nop10, ZINC ION | Authors: | Hamma, T, Reichow, S.L, Varani, G, Ferre-D'Amare, A.R. | Deposit date: | 2005-08-17 | Release date: | 2005-11-15 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | The Cbf5-Nop10 complex is a molecular bracket that organizes box H/ACA RNPs. Nat.Struct.Mol.Biol., 12, 2005
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2H0Z
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2HO7
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2HOK
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2HOL
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2HOO
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5V3F
| Co-crystal structure of the fluorogenic RNA Mango | Descriptor: | 4-{[(2S)-3-{2,16-dioxo-20-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]-6,9,12-trioxa-3,15-diazaicosan-1-yl}-2,3-dihydro-1,3-benzothiazol-2-yl]methyl}-1-methylquinolin-1-ium, PHOSPHATE ION, POTASSIUM ION, ... | Authors: | Trachman, R.J, Ferre-D'Amare, A.R. | Deposit date: | 2017-03-07 | Release date: | 2017-05-24 | Last modified: | 2024-03-06 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Structural basis for high-affinity fluorophore binding and activation by RNA Mango. Nat. Chem. Biol., 13, 2017
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2H0X
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2H0S
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2H0W
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2HO6
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2HOM
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2HOJ
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2HOP
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6OD9
| Co-crystal structure of the Fusobacterium ulcerans ZTP riboswitch using an X-ray free-electron laser | Descriptor: | AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE, CESIUM ION, MAGNESIUM ION, ... | Authors: | Jones, C.P, Tran, B, Ferre-D'Amare, A.R. | Deposit date: | 2019-03-26 | Release date: | 2019-07-17 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (4.102 Å) | Cite: | Co-crystal structure of the Fusobacterium ulcerans ZTP riboswitch using an X-ray free-electron laser. Acta Crystallogr.,Sect.F, 75, 2019
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3OT0
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1AM9
| HUMAN SREBP-1A BOUND TO LDL RECEPTOR PROMOTER | Descriptor: | DNA (5'-D(*CP*AP*TP*GP*AP*GP*AP*TP*CP*AP*CP*CP*CP*CP*AP*CP*T P*GP*CP*AP*A)-3'), DNA (5'-D(*TP*TP*GP*CP*AP*GP*TP*GP*GP*GP*GP*TP*GP*AP*TP*CP*T )-3'), MAGNESIUM ION, ... | Authors: | Parraga, A, Burley, S.K. | Deposit date: | 1997-06-25 | Release date: | 1998-07-10 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Co-crystal structure of sterol regulatory element binding protein 1a at 2.3 A resolution. Structure, 6, 1998
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