Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7MHL
DownloadVisualize
BU of 7mhl by Molmil
Ensemble refinement structure of SARS-CoV-2 main protease (Mpro) at 100 K
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, ZINC ION
Authors:Ebrahim, A, Riley, B.T, Kumaran, D, Andi, B, Fuchs, M.R, McSweeney, S, Keedy, D.A.
Deposit date:2021-04-15
Release date:2021-05-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The tem-per-ature-dependent conformational ensemble of SARS-CoV-2 main protease (M pro ).
Iucrj, 9, 2022
7MHM
DownloadVisualize
BU of 7mhm by Molmil
Ensemble refinement structure of SARS-CoV-2 main protease (Mpro) at 240 K
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, ZINC ION
Authors:Ebrahim, A, Riley, B.T, Kumaran, D, Andi, B, Fuchs, M.R, McSweeney, S, Keedy, D.A.
Deposit date:2021-04-15
Release date:2021-05-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5302 Å)
Cite:The tem-per-ature-dependent conformational ensemble of SARS-CoV-2 main protease (M pro ).
Iucrj, 9, 2022
1H5I
DownloadVisualize
BU of 1h5i by Molmil
X-ray induced reduction of horseradish peroxidase C1A Compound III (56-67% dose)
Descriptor: ACETATE ION, CALCIUM ION, HYDROGEN PEROXIDE, ...
Authors:Berglund, G.I, Carlsson, G.H, Hajdu, J, Smith, A.T, Szoke, H, Henriksen, A.
Deposit date:2001-05-22
Release date:2002-05-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Catalytic Pathway of Horseradish Peroxidase at High Resolution
Nature, 417, 2002
1H55
DownloadVisualize
BU of 1h55 by Molmil
STRUCTURE OF HORSERADISH PEROXIDASE C1A COMPOUND II
Descriptor: ACETATE ION, CALCIUM ION, OXYGEN ATOM, ...
Authors:Berglund, G.I, Carlsson, G.H, Hajdu, J, Smith, A.T, Szoke, H, Henriksen, A.
Deposit date:2001-05-18
Release date:2002-06-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:The Catalytic Pathway of Horseradish Peroxidase at High Resolution
Nature, 417, 2002
1H5K
DownloadVisualize
BU of 1h5k by Molmil
X-ray induced reduction of horseradish peroxidase C1A Compound III (78-89% dose)
Descriptor: ACETATE ION, CALCIUM ION, HYDROGEN PEROXIDE, ...
Authors:Berglund, G.I, Carlsson, G.H, Hajdu, J, Smith, A.T, Szoke, H, Henriksen, A.
Deposit date:2001-05-22
Release date:2002-05-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Catalytic Pathway of Horseradish Peroxidase at High Resolution
Nature, 417, 2002
7R4O
DownloadVisualize
BU of 7r4o by Molmil
Structure of human hydroxyacid oxidase 1 bound with 2-((4H-1,2,4-triazol-3-yl)thio)-1-(4-(3-chlorophenyl)piperazin-1-yl)ethan-1-one
Descriptor: 2-((4H-1,2,4-triazol-3-yl)thio)-1-(4-(3-chlorophenyl)piperazin-1-yl)ethan-1-one, FLAVIN MONONUCLEOTIDE, Hydroxyacid oxidase 1
Authors:Mackinnon, S, Bezerra, G.A, Krojer, T, Bradley, A.R, Talon, R, Brandeo-Neto, J, Douangamath, A, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Oppermann, U, Brennan, P.E, Yue, W.W.
Deposit date:2022-02-08
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of human hydroxyacid oxidase 1 bound with 5-bromo-N-methyl-1H-indazole-3-carboxamide
To Be Published
4AGI
DownloadVisualize
BU of 4agi by Molmil
Crystal Structure of Fucose binding lectin from Aspergillus Fumigatus (AFL) in complex with seleno fucoside.
Descriptor: FUCOSE-SPECIFIC LECTIN FLEA, methyl 1-seleno-alpha-L-fucopyranoside
Authors:Houser, J, Komarek, J, Kostlanova, N, Lahmann, M, Cioci, G, Varrot, A, Imberty, A, Wimmerova, M.
Deposit date:2012-01-30
Release date:2013-02-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A Soluble Fucose-Specific Lectin from Aspergillus Fumigatus Conidia - Structure, Specificity and Possible Role in Fungal Pathogenicity.
Plos One, 8, 2013
1H0T
DownloadVisualize
BU of 1h0t by Molmil
An affibody in complex with a target protein: structure and coupled folding
Descriptor: IMMUNOGLOBULIN G BINDING PROTEIN A, ZSPA-1 AFFIBODY
Authors:Wahlberg, E, Lendel, C, Helgstrand, M, Allard, P, Dincbas-Renqvist, V, Hedqvist, A, Berglund, H, Nygren, P.-A, Hard, T.
Deposit date:2002-06-27
Release date:2003-02-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An Affibody in Complex with a Target Protein: Structure and Coupled Folding
Proc.Natl.Acad.Sci.USA, 100, 2003
7R4P
DownloadVisualize
BU of 7r4p by Molmil
Structure of human hydroxyacid oxidase 1 bound with 6-amino-1-benzyl-5-(methylamino)pyrimidine-2,4(1H,3H)-dione
Descriptor: 6-amino-1-benzyl-5-(methylamino)pyrimidine-2,4(1H,3H)-dione, FLAVIN MONONUCLEOTIDE, Hydroxyacid oxidase 1
Authors:Mackinnon, S, Bezerra, G.A, Krojer, T, Bradley, A.R, Talon, R, Brandeo-Neto, J, Douangamath, A, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Oppermann, U, Brennan, P.E, Yue, W.W.
Deposit date:2022-02-09
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Structure of human hydroxyacid oxidase 1 bound with 5-bromo-N-methyl-1H-indazole-3-carboxamide
To Be Published
2V2G
DownloadVisualize
BU of 2v2g by Molmil
Crystal Structure of the C45S mutant of the Peroxiredoxin 6 of Arenicola Marina. Monoclinic form
Descriptor: BENZOIC ACID, GLYCEROL, PEROXIREDOXIN 6
Authors:Smeets, A, Declercq, J.P.
Deposit date:2007-06-05
Release date:2008-04-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Crystal Structure of the C45S Mutant of Annelid Arenicola Marina Peroxiredoxin 6 Supports its Assignment to the Mechanistically Typical 2- Cys Subfamily without Any Formation of Toroid- Shaped Decamers.
Protein Sci., 17, 2008
1Z0B
DownloadVisualize
BU of 1z0b by Molmil
Crystal Structure of A. fulgidus Lon proteolytic domain E506A mutant
Descriptor: CALCIUM ION, Putative protease La homolog type
Authors:Botos, I, Melnikov, E.E, Cherry, S, Kozlov, S, Makhovskaya, O.V, Tropea, J.E, Gustchina, A, Rotanova, T.V, Wlodawer, A.
Deposit date:2005-03-01
Release date:2005-08-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Atomic-resolution Crystal Structure of the Proteolytic Domain of Archaeoglobus fulgidus Lon Reveals the Conformational Variability in the Active Sites of Lon Proteases
J.Mol.Biol., 351, 2005
1VB9
DownloadVisualize
BU of 1vb9 by Molmil
Crystal structure of Thermoactinomyces vulgaris R-47 alpha-amylase II (TVA II) complexed with transglycosylated product
Descriptor: CALCIUM ION, alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-[alpha-D-glucopyranose-(1-6)]alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, alpha-amylase II
Authors:Mizuno, M, Tonozuka, T, Uechi, A, Ohtaki, A, Ichikawa, K, Kamitori, S, Nishikawa, A, Sakano, Y.
Deposit date:2004-02-25
Release date:2005-03-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure of Thermoactinomyces vulgaris R-47 alpha-amylase II (TVA II) complexed with transglycosylated product
EUR.J.BIOCHEM., 271, 2004
5CWT
DownloadVisualize
BU of 5cwt by Molmil
Crystal structure of Chaetomium thermophilum Nup57
Descriptor: Nucleoporin NUP57
Authors:Bley, C.J, Hoelz, A.
Deposit date:2015-07-28
Release date:2015-09-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Architecture of the fungal nuclear pore inner ring complex.
Science, 350, 2015
2VG6
DownloadVisualize
BU of 2vg6 by Molmil
Crystal structures of HIV-1 reverse transcriptase complexes with thiocarbamate non-nucleoside inhibitors
Descriptor: O-[2-(1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)ethyl] (4-bromophenyl)thiocarbamate, P51 RT, REVERSE TRANSCRIPTASE/RIBONUCLEASE H
Authors:Spallarossa, A, Cesarini, S, Ranise, A, Ponassi, M, Unge, T, Bolognesi, M.
Deposit date:2007-11-08
Release date:2007-12-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Crystal Structures of HIV-1 Reverse Transcriptase Complexes with Thiocarbamate Non-Nucleoside Inhibitors.
Biochem.Biophys.Res.Commun., 365, 2008
1H5E
DownloadVisualize
BU of 1h5e by Molmil
X-ray induced reduction of horseradish peroxidase C1A Compound III (11-22% dose)
Descriptor: ACETATE ION, CALCIUM ION, PEROXIDASE C1A, ...
Authors:Berglund, G.I, Carlsson, G.H, Hajdu, J, Smith, A.T, Szoke, H, Henriksen, A.
Deposit date:2001-05-21
Release date:2002-05-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Catalytic Pathway of Horseradish Peroxidase at High Resolution
Nature, 417, 2002
5D2A
DownloadVisualize
BU of 5d2a by Molmil
Bifunctional dendrimers
Descriptor: 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid, CALCIUM ION, Fucose-binding lectin, ...
Authors:Michaud, G, Visini, R, Stocker, A, Darbre, T, Reymond, J.L.
Deposit date:2015-08-05
Release date:2016-02-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.134 Å)
Cite:Overcoming antibiotic resistance inPseudomonas aeruginosabiofilms using glycopeptide dendrimers.
Chem Sci, 7, 2016
5MGD
DownloadVisualize
BU of 5mgd by Molmil
STRUCTURE OF E298Q-BETA-GALACTOSIDASE FROM ASPERGILLUS NIGER IN COMPLEX WITH 6-Galactosyl-lactose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Rico-Diaz, A, Ramirez-Escudero, M, Vizoso Vazquez, A, Cerdan, M.E, Becerra, M, Sanz-Aparicio, J.
Deposit date:2016-11-21
Release date:2017-04-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural features of Aspergillus niger beta-galactosidase define its activity against glycoside linkages.
FEBS J., 284, 2017
5D9I
DownloadVisualize
BU of 5d9i by Molmil
SV40 Large T antigen origin binding domain bound to artificial DNA fork
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Meinke, G, Bohm, A, Bullock, P.A.
Deposit date:2015-08-18
Release date:2015-09-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-based analysis of the interaction between the simian virus 40 T-antigen origin binding domain and single-stranded DNA.
J. Virol., 85, 2011
3CCN
DownloadVisualize
BU of 3ccn by Molmil
X-ray structure of c-Met with triazolopyridazine inhibitor.
Descriptor: 4-[(6-phenyl[1,2,4]triazolo[4,3-b]pyridazin-3-yl)methyl]phenol, Hepatocyte growth factor receptor
Authors:Abrecht, B.K, Harmange, J.-C, Bauer, D, Dussault, I, long, A, Bellon, S.F.
Deposit date:2008-02-26
Release date:2008-04-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discovery and Optimization of Triazolopyridazines as Potent and Selective Inhibitors of the c-Met Kinase.
J.Med.Chem., 51, 2008
1H58
DownloadVisualize
BU of 1h58 by Molmil
STRUCTURE OF FERROUS HORSERADISH PEROXIDASE C1A
Descriptor: ACETATE ION, CALCIUM ION, PEROXIDASE C1A, ...
Authors:Berglund, G.I, Carlsson, G.H, Hajdu, J, Smith, A.T, Szoke, H, Henriksen, A.
Deposit date:2001-05-20
Release date:2002-06-18
Last modified:2018-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Catalytic Pathway of Horseradish Peroxidase at High Resolution
Nature, 417, 2002
5ERK
DownloadVisualize
BU of 5erk by Molmil
X-ray structure of horse spleen apoferritin (control)
Descriptor: CADMIUM ION, CHLORIDE ION, Ferritin light chain, ...
Authors:Pontillo, N, Merlino, A.
Deposit date:2015-11-14
Release date:2016-03-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Cisplatin encapsulation within a ferritin nanocage: a high-resolution crystallographic study.
Chem.Commun.(Camb.), 52, 2016
1K19
DownloadVisualize
BU of 1k19 by Molmil
NMR Solution Structure of the Chemosensory Protein CSP2 from Moth Mamestra brassicae
Descriptor: Chemosensory Protein CSP2
Authors:Mosbah, A, Campanacci, V, Lartigue, A, Tegoni, M, Cambillau, C, Darbon, H.
Deposit date:2001-09-24
Release date:2002-12-04
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of a chemosensory protein from the moth Mamestra brassicae
BIOCHEM.J., 369, 2003
2V24
DownloadVisualize
BU of 2v24 by Molmil
Structure of the human SPRY domain-containing SOCS box protein SSB-4
Descriptor: NICKEL (II) ION, SPRY DOMAIN-CONTAINING SOCS BOX PROTEIN 4
Authors:Uppenberg, J, Bullock, A, Keates, T, Savitsky, P, Pike, A.C.W, Ugochukwu, E, Bunkoczi, G, von Delft, F, Weigelt, J, Arrowsmith, C.H, Edwards, A, Sundstrom, M, Knapp, S.
Deposit date:2007-05-31
Release date:2007-07-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis for Par-4 Recognition by the Spry Domain-and Socs Box-Containing Proteins Spsb1, Spsb2, and Spsb4.
J.Mol.Biol., 401, 2010
1H5C
DownloadVisualize
BU of 1h5c by Molmil
X-ray induced reduction of horseradish peroxidase C1A Compound III (100-200% dose)
Descriptor: ACETATE ION, CALCIUM ION, PEROXIDASE C1A, ...
Authors:Berglund, G.I, Carlsson, G.H, Hajdu, J, Smith, A.T, Szoke, H, Henriksen, A.
Deposit date:2001-05-21
Release date:2002-06-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:The Catalytic Pathway of Horseradish Peroxidase at High Resolution
Nature, 417, 2002
2BIC
DownloadVisualize
BU of 2bic by Molmil
The solution structure of the recombinant elicitor protein PcF from the oomycete pathogen P. cactorum
Descriptor: PHYTOTOXIC PROTEIN PCF
Authors:Nicastro, G, Orsomando, G, Desario, F, Ferrari, E, Manconi, L, Spisni, A, Ruggieri, S.
Deposit date:2005-01-20
Release date:2006-06-28
Last modified:2020-01-15
Method:SOLUTION NMR
Cite:Solution Structure of the Phytotoxic Protein Pcf: The First Characterized Member of the Phytophthora Pcf Toxin Family.
Protein Sci., 18, 2009

222624

数据于2024-07-17公开中

PDB statisticsPDBj update infoContact PDBjnumon