Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5HM0
DownloadVisualize
BU of 5hm0 by Molmil
Crystal structure of the first bromodomain of human BRD4 bound to benzoisoxazoloazepine 3
Descriptor: 6-(4-chlorophenyl)-1-methyl-4H-[1,2]oxazolo[5,4-d][2]benzazepine, Bromodomain-containing protein 4
Authors:Jayaram, H, Poy, F, Setser, J.W, Bellon, S.F.
Deposit date:2016-01-15
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.395 Å)
Cite:Identification of a Benzoisoxazoloazepine Inhibitor (CPI-0610) of the Bromodomain and Extra-Terminal (BET) Family as a Candidate for Human Clinical Trials.
J.Med.Chem., 59, 2016
5HPQ
DownloadVisualize
BU of 5hpq by Molmil
Crystal structure of cyclohexadienyl dehydratase from Pseudomonas aeruginosa bound to acetate
Descriptor: ACETATE ION, Cyclohexadienyl dehydratase
Authors:Clifton, B.E, Carr, P.D, Jackson, C.J.
Deposit date:2016-01-20
Release date:2017-01-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of cyclohexadienyl dehydratase from Pseudomonas aeruginosa bound to acetate
To Be Published
2F1G
DownloadVisualize
BU of 2f1g by Molmil
Cathepsin S in complex with non-covalent 2-(Benzoxazol-2-ylamino)-acetamide
Descriptor: Cathepsin S, GLYCEROL, N~2~-1,3-BENZOXAZOL-2-YL-3-CYCLOHEXYL-N-{2-[(4-METHOXYPHENYL)AMINO]ETHYL}-L-ALANINAMIDE
Authors:Spraggon, G, Hornsby, M, Lesley, S.A, Tully, D.C, Harris, J.L, Karenewsky, D.S, Kulathila, R, Clark, K.
Deposit date:2005-11-14
Release date:2006-04-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Synthesis and evaluation of arylaminoethyl amides as noncovalent inhibitors of cathepsin S. Part 3: Heterocyclic P3.
Bioorg.Med.Chem.Lett., 16, 2006
2F6V
DownloadVisualize
BU of 2f6v by Molmil
Protein tyrosine phosphatase 1B with sulfamic acid inhibitors
Descriptor: (3R)-METHYLCARBAMOYL-7-SULFOAMINO-3,4-DIHYDRO-1H-ISOQUINOLINE-2-CARBOXYLIC ACID BENZYL ESTER, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Evdokimov, A.G, Pokross, M.E, Klopfenstein, S.R.
Deposit date:2005-11-29
Release date:2005-12-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:1,2,3,4-Tetrahydroisoquinolinyl sulfamic acids as phosphatase PTP1B inhibitors
Bioorg.Med.Chem.Lett., 16, 2006
5HFS
DownloadVisualize
BU of 5hfs by Molmil
CRYSTAL STRUCTURE OF C-TERMINAL DOMAIN OF CARGO PROTEINS OF TYPE IX SECRETION SYSTEM
Descriptor: CALCIUM ION, Gingipain R2, ZINC ION
Authors:Golik, P, Szmigielski, B, Ksiazek, M, Nowakowska, Z, Mizgalska, D, Nowak, M, Dubin, G, Potempa, J.
Deposit date:2016-01-07
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:The outer-membrane export signal of Porphyromonas gingivalis type IX secretion system (T9SS) is a conserved C-terminal beta-sandwich domain.
Sci Rep, 6, 2016
2ZNC
DownloadVisualize
BU of 2znc by Molmil
MURINE CARBONIC ANHYDRASE IV
Descriptor: CARBONIC ANHYDRASE IV, ZINC ION
Authors:Stams, T, Chen, Y, Christianson, D.W.
Deposit date:1998-02-10
Release date:1999-03-23
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of murine carbonic anhydrase IV and human carbonic anhydrase II complexed with brinzolamide: molecular basis of isozyme-drug discrimination.
Protein Sci., 7, 1998
5HLN
DownloadVisualize
BU of 5hln by Molmil
X-RAY CRYSTAL STRUCTURE OF GSK3B IN COMPLEX WITH CHIR99021
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHIR99021, Glycogen synthase kinase-3 beta, ...
Authors:White, A, Lakshminarasimhan, D, Nadupalli, A, Suto, R.K.
Deposit date:2016-01-15
Release date:2016-05-25
Last modified:2016-07-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Inhibitors of Glycogen Synthase Kinase 3 with Exquisite Kinome-Wide Selectivity and Their Functional Effects.
Acs Chem.Biol., 11, 2016
5HL3
DownloadVisualize
BU of 5hl3 by Molmil
Crystal structure of Listeria monocytogenes InlP
Descriptor: CALCIUM ION, CHLORIDE ION, Lmo2470 protein
Authors:Nocadello, S, Light, S.H, Minasov, G, Kiryukhina, O, Kwon, K, Faralla, C, Bakardjiev, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-01-14
Release date:2017-01-18
Last modified:2021-01-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Listeria monocytogenes InlP interacts with afadin and facilitates basement membrane crossing.
Plos Pathog., 14, 2018
5HLS
DownloadVisualize
BU of 5hls by Molmil
Crystal structure of the first bromodomain of human BRD4 bound to CPI-0610
Descriptor: Bromodomain-containing protein 4, CPI-0610
Authors:Jayaram, H, Poy, F, Setser, J.W, Bellon, S.F.
Deposit date:2016-01-15
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.182 Å)
Cite:Identification of a Benzoisoxazoloazepine Inhibitor (CPI-0610) of the Bromodomain and Extra-Terminal (BET) Family as a Candidate for Human Clinical Trials.
J.Med.Chem., 59, 2016
2F70
DownloadVisualize
BU of 2f70 by Molmil
Protein tyrosine phosphatase 1B with sulfamic acid inhibitors
Descriptor: (3-{[3-(3-SULFOAMINO-PHENYL)-PROPIONYLAMINO]-METHYL}-PHENYL)-SULFAMIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Evdokimov, A.G, Pokross, M.E, Klopfenstein, S.R.
Deposit date:2005-11-29
Release date:2005-12-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:1,2,3,4-Tetrahydroisoquinolinyl sulfamic acids as phosphatase PTP1B inhibitors
Bioorg.Med.Chem.Lett., 16, 2006
2F6Y
DownloadVisualize
BU of 2f6y by Molmil
Protein tyrosine phosphatase 1B with sulfamic acid inhibitors
Descriptor: 3(R)-METHYLCARBAMOYL-7-SULFOAMINO-3,4-DIHYDRO-1H-ISOQUINOLINE-2-CARBOXYLIC ACID TERT-BUTYL ESTER, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Evdokimov, A.G, Pokross, M.E, Klopfenstein, S.R.
Deposit date:2005-11-29
Release date:2005-12-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:1,2,3,4-Tetrahydroisoquinolinyl sulfamic acids as phosphatase PTP1B inhibitors
Bioorg.Med.Chem.Lett., 16, 2006
3BNX
DownloadVisualize
BU of 3bnx by Molmil
Crystal structure of Aristolochene synthase complexed with farnesyl diphosphate
Descriptor: Aristolochene synthase, BETA-MERCAPTOETHANOL, FARNESYL DIPHOSPHATE, ...
Authors:Shishova, E.Y, Christianson, D.W.
Deposit date:2007-12-14
Release date:2008-03-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray Crystallographic Studies of Substrate Binding to Aristolochene Synthase Suggest a Metal Ion Binding Sequence for Catalysis
J.Biol.Chem., 283, 2008
5G0Z
DownloadVisualize
BU of 5g0z by Molmil
Structure of native granulovirus polyhedrin determined using an X-ray free-electron laser
Descriptor: GRANULIN
Authors:Gati, C, Bunker, R.D, Oberthur, D, Metcalf, P, Henry, C.
Deposit date:2016-03-23
Release date:2017-02-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Atomic structure of granulin determined from native nanocrystalline granulovirus using an X-ray free-electron laser.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
2G16
DownloadVisualize
BU of 2g16 by Molmil
Structure of S65A Y66S GFP variant after backbone fragmentation
Descriptor: Green fluorescent protein
Authors:Barondeau, D.P.
Deposit date:2006-02-13
Release date:2006-04-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation.
J.Am.Chem.Soc., 128, 2006
3CBC
DownloadVisualize
BU of 3cbc by Molmil
Crystal structure of Siderocalin (NGAL, Lipocalin 2) Y106F complexed with Ferric Enterobactin
Descriptor: 2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID, GLYCEROL, Neutrophil gelatinase-associated lipocalin, ...
Authors:Clifton, M.C, Pizaro, J.C, Strong, R.K.
Deposit date:2008-02-21
Release date:2008-09-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:The siderocalin/enterobactin interaction: a link between mammalian immunity and bacterial iron transport.
J.Am.Chem.Soc., 130, 2008
2FW9
DownloadVisualize
BU of 2fw9 by Molmil
Structure of PurE (N5-carboxyaminoimidazole ribonucleotide mutase) H59F from the acidophilic bacterium Acetobacter aceti, at pH 8
Descriptor: N5-carboxyaminoimidazole ribonucleotide mutase, SULFATE ION
Authors:Starks, C.M, Kappock, T.J.
Deposit date:2006-02-01
Release date:2006-06-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Biochemical and Structural Studies of N(5)-Carboxyaminoimidazole Ribonucleotide Mutase from the Acidophilic Bacterium Acetobacter aceti.
Biochemistry, 45, 2006
5HVS
DownloadVisualize
BU of 5hvs by Molmil
Crystal Structure of Macrophage Migration Inhibitory Factor (MIF) with a Biaryltriazole Inhibitor (3i-305)
Descriptor: 3-({2-[1-(3-fluoro-4-hydroxyphenyl)-1H-1,2,3-triazol-4-yl]quinolin-5-yl}oxy)benzoic acid, GLYCEROL, Macrophage migration inhibitory factor, ...
Authors:Robertson, M.J, Jorgensen, W.L.
Deposit date:2016-01-28
Release date:2016-06-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A Fluorescence Polarization Assay for Binding to Macrophage Migration Inhibitory Factor and Crystal Structures for Complexes of Two Potent Inhibitors.
J.Am.Chem.Soc., 138, 2016
3BV3
DownloadVisualize
BU of 3bv3 by Molmil
Morpholino pyrrolotriazine P38 Alpha Map Kinase inhibitor compound 2
Descriptor: 5-methyl-4-[(2-methyl-5-{[(3-morpholin-4-ylphenyl)carbonyl]amino}phenyl)amino]-N-[(1S)-1-phenylethyl]pyrrolo[2,1-f][1,2,4]triazine-6-carboxamide, Mitogen-activated protein kinase 14
Authors:Sack, J.S.
Deposit date:2008-01-04
Release date:2008-04-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Synthesis and SAR of new pyrrolo[2,1-f][1,2,4]triazines as potent p38 alpha MAP kinase inhibitors.
Bioorg.Med.Chem.Lett., 18, 2008
5H5M
DownloadVisualize
BU of 5h5m by Molmil
Crystal structure of HMP-1 M domain
Descriptor: Alpha-catenin-like protein hmp-1
Authors:Kang, H, Bang, I, Weis, W.I, Choi, H.J.
Deposit date:2016-11-08
Release date:2017-03-29
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and functional characterization of Caenorhabditis elegans alpha-catenin reveals constitutive binding to beta-catenin and F-actin
J. Biol. Chem., 292, 2017
2FGT
DownloadVisualize
BU of 2fgt by Molmil
Crystal Structure of YycH from Bacillus subtilis
Descriptor: Two-component system yycF/yycG regulatory protein yycH
Authors:Szurmant, H, Zhao, H, Mohan, M.A, James, H.A, Varughese, K.I.
Deposit date:2005-12-22
Release date:2006-04-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of YycH involved in the regulation of the essential YycFG two-component system in Bacillus subtilis reveals a novel tertiary structure.
Protein Sci., 15, 2006
3BY0
DownloadVisualize
BU of 3by0 by Molmil
Crystal structure of Siderocalin (NGAL, Lipocalin 2) W79A-R81A complexed with Ferric Enterobactin
Descriptor: 2,3-DIHYDROXY-BENZOIC ACID, 2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID, FE (III) ION, ...
Authors:Clifton, M.C, Pizzaro, J.C, Strong, R.K.
Deposit date:2008-01-15
Release date:2008-09-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.572 Å)
Cite:The siderocalin/enterobactin interaction: a link between mammalian immunity and bacterial iron transport.
J.Am.Chem.Soc., 130, 2008
5HVT
DownloadVisualize
BU of 5hvt by Molmil
Crystal Structure of Macrophage Migration Inhibitory Factor (MIF) with a Potent Inhibitor (NVS-2)
Descriptor: 7-hydroxy-3-(4-methoxyphenyl)-3,4-dihydro-2H-1,3-benzoxazin-2-one, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Robertson, M.J, Jorgensen, W.L.
Deposit date:2016-01-28
Release date:2016-06-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A Fluorescence Polarization Assay for Binding to Macrophage Migration Inhibitory Factor and Crystal Structures for Complexes of Two Potent Inhibitors.
J.Am.Chem.Soc., 138, 2016
5HX2
DownloadVisualize
BU of 5hx2 by Molmil
In vitro assembled star-shaped hubless T4 baseplate
Descriptor: Baseplate wedge protein gp10, Baseplate wedge protein gp53, Baseplate wedge protein gp6, ...
Authors:Yap, M.L, Klose, T, Fokine, A, Rossmann, M.G.
Deposit date:2016-01-29
Release date:2016-03-02
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Role of bacteriophage T4 baseplate in regulating assembly and infection.
Proc.Natl.Acad.Sci.USA, 113, 2016
3C0J
DownloadVisualize
BU of 3c0j by Molmil
Structure of E. coli dihydrodipicolinate synthase complexed with hydroxypyruvate
Descriptor: Dihydrodipicolinate synthase, GLYCEROL, PHOSPHATE ION, ...
Authors:Dobson, R.C.J.
Deposit date:2008-01-21
Release date:2008-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Conserved main-chain peptide distortions: A proposed role for Ile203 in catalysis by dihydrodipicolinate synthase
Protein Sci., 17, 2008
5HX6
DownloadVisualize
BU of 5hx6 by Molmil
Crystal structure of RIP1 kinase with a benzo[b][1,4]oxazepin-4-one
Descriptor: 5-benzyl-N-[(3S)-5-methyl-4-oxo-2,3,4,5-tetrahydro-1,5-benzoxazepin-3-yl]-1,2-oxazole-3-carboxamide, Receptor-interacting serine/threonine-protein kinase 1
Authors:Campobasso, N, Ward, P.
Deposit date:2016-01-29
Release date:2016-03-02
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:DNA-Encoded Library Screening Identifies Benzo[b][1,4]oxazepin-4-ones as Highly Potent and Monoselective Receptor Interacting Protein 1 Kinase Inhibitors.
J.Med.Chem., 59, 2016

225399

数据于2024-09-25公开中

PDB statisticsPDBj update infoContact PDBjnumon