Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7YUU
DownloadVisualize
BU of 7yuu by Molmil
MtaLon-ADP for the spiral oligomers of trimer
Descriptor: Lon protease
Authors:Li, S, Hsieh, K, Kuo, C, Lee, S, Ho, M, Wang, C, Zhang, K, Chang, C.I.
Deposit date:2022-08-17
Release date:2023-10-25
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (5.8 Å)
Cite:A 5+1 assemble-to-activate mechanism of the Lon proteolytic machine.
Nat Commun, 14, 2023
7YUV
DownloadVisualize
BU of 7yuv by Molmil
MtaLon-ADP for the spiral oligomers of tetramer
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Lon protease
Authors:Li, S, Hsieh, K, Kuo, C, Lee, S, Ho, M, Wang, C, Zhang, K, Chang, C.I.
Deposit date:2022-08-17
Release date:2023-10-25
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:A 5+1 assemble-to-activate mechanism of the Lon proteolytic machine.
Nat Commun, 14, 2023
7YUP
DownloadVisualize
BU of 7yup by Molmil
MtaLon-Apo for the spiral oligomers of pentamer
Descriptor: Lon protease
Authors:Li, S, Hsieh, K, Kuo, C, Lee, S, Ho, M, Wang, C, Zhang, K, Chang, C.I.
Deposit date:2022-08-17
Release date:2023-10-25
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:A 5+1 assemble-to-activate mechanism of the Lon proteolytic machine.
Nat Commun, 14, 2023
7YUT
DownloadVisualize
BU of 7yut by Molmil
MtaLon-Apo for the spiral oligomers of hexamer
Descriptor: Lon protease
Authors:Li, S, Hsieh, K, Kuo, C, Lee, S, Ho, M, Wang, C, Zhang, K, Chang, C.I.
Deposit date:2022-08-17
Release date:2023-10-25
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:A 5+1 assemble-to-activate mechanism of the Lon proteolytic machine.
Nat Commun, 14, 2023
7YUX
DownloadVisualize
BU of 7yux by Molmil
MtaLon-ADP for the spiral oligomers of hexamer
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Lon protease
Authors:Li, S, Hsieh, K, Kuo, C, Lee, S, Ho, M, Wang, C, Zhang, K, Chang, C.I.
Deposit date:2022-08-18
Release date:2023-10-25
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:A 5+1 assemble-to-activate mechanism of the Lon proteolytic machine.
Nat Commun, 14, 2023
7YUW
DownloadVisualize
BU of 7yuw by Molmil
MtaLon-ADP for the spiral oligomers of pentamer
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Lon protease
Authors:Li, S, Hsieh, K, Kuo, C, Lee, S, Ho, M, Wang, C, Zhang, K, Chang, C.I.
Deposit date:2022-08-18
Release date:2023-10-25
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:A 5+1 assemble-to-activate mechanism of the Lon proteolytic machine.
Nat Commun, 14, 2023
7YUM
DownloadVisualize
BU of 7yum by Molmil
MtaLon-Apo for the spiral oligomers of tetramer
Descriptor: Lon protease
Authors:Li, S, Hsieh, K, Kuo, C, Lee, S, Ho, M, Wang, C, Zhang, K, Chang, C.I.
Deposit date:2022-08-17
Release date:2023-10-25
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:A 5+1 assemble-to-activate mechanism of the Lon proteolytic machine.
Nat Commun, 14, 2023
8XMI
DownloadVisualize
BU of 8xmi by Molmil
Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of EDTA and EGTA, C1 symmetry
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Ktr system potassium uptake protein A, Ktr system potassium uptake protein B, ...
Authors:Chang, Y.K, Chiang, W.T, Hu, N.J, Tsai, M.D.
Deposit date:2023-12-27
Release date:2024-04-03
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis and synergism of ATP and Na + activation in bacterial K + uptake system KtrAB.
Nat Commun, 15, 2024
8XMH
DownloadVisualize
BU of 8xmh by Molmil
Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of EDTA and EGTA, vertical C2 symmetry axis
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Ktr system potassium uptake protein A, Ktr system potassium uptake protein B, ...
Authors:Chang, Y.K, Chiang, W.T, Hu, N.J, Tsai, M.D.
Deposit date:2023-12-27
Release date:2024-04-03
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Structural basis and synergism of ATP and Na + activation in bacterial K + uptake system KtrAB.
Nat Commun, 15, 2024
8K1K
DownloadVisualize
BU of 8k1k by Molmil
KtrA bound with ATP and sodium
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Ktr system potassium uptake protein A, SODIUM ION
Authors:Chiang, W.T, Chang, Y.K, Hu, N.J, Tsai, M.D.
Deposit date:2023-07-11
Release date:2024-04-03
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis and synergism of ATP and Na + activation in bacterial K + uptake system KtrAB.
Nat Commun, 15, 2024
8K16
DownloadVisualize
BU of 8k16 by Molmil
KtrA bound with ATP and thallium
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Ktr system potassium uptake protein A, THALLIUM (I) ION
Authors:Chiang, W.T, Chang, Y.K, Hu, N.J, Tsai, M.D.
Deposit date:2023-07-10
Release date:2024-04-03
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis and synergism of ATP and Na + activation in bacterial K + uptake system KtrAB.
Nat Commun, 15, 2024
8K1T
DownloadVisualize
BU of 8k1t by Molmil
Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of MgCl2
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Ktr system potassium uptake protein A, Ktr system potassium uptake protein B, ...
Authors:Chang, Y.K, Chiang, W.T, Hu, N.J, Tsai, M.D.
Deposit date:2023-07-11
Release date:2024-04-03
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.48 Å)
Cite:Structural basis and synergism of ATP and Na + activation in bacterial K + uptake system KtrAB.
Nat Commun, 15, 2024
8K1S
DownloadVisualize
BU of 8k1s by Molmil
Potassium transporter KtrAB from Bacillus subtilis in ADP-bound state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Ktr system potassium uptake protein A, Ktr system potassium uptake protein B, ...
Authors:Chang, Y.K, Chiang, W.T, Hu, N.J, Tsai, M.D.
Deposit date:2023-07-11
Release date:2024-04-03
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:Structural basis and synergism of ATP and Na + activation in bacterial K + uptake system KtrAB.
Nat Commun, 15, 2024
8K1U
DownloadVisualize
BU of 8k1u by Molmil
Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of EDTA and EGTA
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Ktr system potassium uptake protein A, Ktr system potassium uptake protein B, ...
Authors:Chang, Y.K, Chiang, W.T, Hu, N.J, Tsai, M.D.
Deposit date:2023-07-11
Release date:2024-04-03
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Structural basis and synergism of ATP and Na + activation in bacterial K + uptake system KtrAB.
Nat Commun, 15, 2024
8J89
DownloadVisualize
BU of 8j89 by Molmil
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIa
Descriptor: DNA topoisomerase 2
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-01
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.31 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J8B
DownloadVisualize
BU of 8j8b by Molmil
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIIa
Descriptor: DNA topoisomerase 2
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-01
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.43 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J87
DownloadVisualize
BU of 8j87 by Molmil
Asfv topoisomerase 2 - apo conformer Ia
Descriptor: DNA topoisomerase 2
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-01
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8JA2
DownloadVisualize
BU of 8ja2 by Molmil
ASFV Topoisomerase ATPase domain in complex with AMP-PNP and Mg2+
Descriptor: DNA topoisomerase 2, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Pang, A.H, Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-05
Release date:2024-02-07
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J9V
DownloadVisualize
BU of 8j9v by Molmil
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02aDNA and etoposide (EDI-1)
Descriptor: (5S,5aR,8aR,9R)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5,5a,6,8,8a,9-hexahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol -5-yl 4,6-O-[(1R)-ethylidene]-beta-D-glucopyranoside, DNA (5'-D(*GP*AP*GP*GP*TP*AP*TP*GP*TP*AP*GP*GP*C)-3'), DNA (5'-D(*GP*GP*CP*CP*GP*CP*CP*TP*AP*CP*AP*TP*AP*CP*CP*TP*C)-3'), ...
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-05
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.71 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J8C
DownloadVisualize
BU of 8j8c by Molmil
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIIb
Descriptor: DNA topoisomerase 2
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-01
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.69 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J88
DownloadVisualize
BU of 8j88 by Molmil
Asfv topoisomerase 2 - apo conformer Ib
Descriptor: DNA topoisomerase 2
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-01
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J9W
DownloadVisualize
BU of 8j9w by Molmil
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02bDNA and etoposide (EDI-2)
Descriptor: (5S,5aR,8aR,9R)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5,5a,6,8,8a,9-hexahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol -5-yl 4,6-O-[(1R)-ethylidene]-beta-D-glucopyranoside, DNA (5'-D(*AP*AP*GP*AP*AP*CP*TP*CP*TP*GP*TP*AP*G)-3'), DNA (5'-D(*CP*AP*TP*GP*CP*TP*AP*CP*AP*GP*AP*GP*TP*TP*CP*TP*T)-3'), ...
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-05
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J8A
DownloadVisualize
BU of 8j8a by Molmil
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIb
Descriptor: DNA topoisomerase 2
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-01
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.51 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J9X
DownloadVisualize
BU of 8j9x by Molmil
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02aDNA and m-AMSA (EDI-3)
Descriptor: DNA (5'-D(*GP*AP*GP*GP*TP*AP*TP*GP*TP*AP*GP*GP*C)-3'), DNA (5'-D(*GP*GP*CP*CP*GP*CP*CP*TP*AP*CP*AP*TP*AP*CP*CP*TP*C)-3'), DNA topoisomerase 2, ...
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-05
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (3 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8JA1
DownloadVisualize
BU of 8ja1 by Molmil
ASFV Topoisomerase ATPase domain in complex with AMP-PNP and Mg2+ (oxidized form)
Descriptor: DNA topoisomerase 2, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Chang, C.-W, Pang, A.H, Tsai, M.-D.
Deposit date:2023-05-05
Release date:2024-02-07
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024

227111

数据于2024-11-06公开中

PDB statisticsPDBj update infoContact PDBjnumon