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70S-wild-type HigB toxin complex bound to a AAA lysine codon
Descriptor:	16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:	Schureck, M.A, Dunham, C.M.
Deposit date:	2015-05-13
Release date:	2016-09-07
Last modified:	2024-03-06
Method:	X-RAY DIFFRACTION (3.6 Å)
Cite:	Mechanism of endonuclease cleavage by the HigB toxin. Nucleic Acids Res., 44, 2016

5VPP

The 70S P-site tRNA SufA6 complex
Descriptor:	16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:	Hong, S, Sunita, S, Dunkle, J.A, Maehigashi, T, Dunham, C.M.
Deposit date:	2017-05-05
Release date:	2018-09-26
Last modified:	2024-12-25
Method:	X-RAY DIFFRACTION (3.9 Å)
Cite:	Mechanism of tRNA-mediated +1 ribosomal frameshifting. Proc. Natl. Acad. Sci. U.S.A., 115, 2018

8UTJ

E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frame
Descriptor:	16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S11, ...
Authors:	Kimbrough, E.M, Dunham, C.M, Nguyen, H.A.
Deposit date:	2023-10-31
Release date:	2025-07-09
Method:	ELECTRON MICROSCOPY (3.5 Å)
Cite:	An RNA modification prevents extended codon-anticodon interactions from facilitating +1 frameshifting Nat Commun, 2025

8URM

E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site
Descriptor:	13S ribosomal RNA, 16S ribosomal RNA, 30S ribosomal protein S11, ...
Authors:	Kimbrough, E.M, Dunham, C.M, Nguyen, H.A.
Deposit date:	2023-10-26
Release date:	2025-07-09
Method:	ELECTRON MICROSCOPY (3 Å)
Cite:	An RNA modification prevents extended codon-anticodon interactions from facilitating +1 frameshifting Nat Commun, 2025

8UX8

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the +1 mRNA reading frame
Descriptor:	16S ribosomal RNA, 23S rRNA, 30S ribosomal protein S11, ...
Authors:	Kimbrough, E.M, Dunham, C.M, Nguyen, H.A.
Deposit date:	2023-11-09
Release date:	2025-07-09
Method:	ELECTRON MICROSCOPY (3.6 Å)
Cite:	An RNA modification prevents extended codon-anticodon interactions from facilitating +1 frameshifting Nat Commun, 2025

8UXB

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon
Descriptor:	16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:	Kimbrough, E.M, Dunham, C.M, Nguyen, H.A.
Deposit date:	2023-11-09
Release date:	2025-07-09
Method:	ELECTRON MICROSCOPY (2.9 Å)
Cite:	An RNA modification prevents extended codon-anticodon interactions from facilitating +1 frameshifting Nat Commun, 2025

8UZ3

E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon
Descriptor:	16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:	Kimbrough, E.M, Dunham, C.M, Nguyen, H.A.
Deposit date:	2023-11-14
Release date:	2025-07-09
Method:	ELECTRON MICROSCOPY (3.2 Å)
Cite:	An RNA modification prevents extended codon-anticodon interactions from facilitating +1 frameshifting Nat Commun, 2025

8V03

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon
Descriptor:	16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S11, ...
Authors:	Kimbrough, E.M, Dunham, C.M, Nguyen, H.A.
Deposit date:	2023-11-16
Release date:	2025-07-09
Method:	ELECTRON MICROSCOPY (4 Å)
Cite:	An RNA modification prevents extended codon-anticodon interactions from facilitating +1 frameshifting Nat Commun, 2025

8UZG

E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon
Descriptor:	16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:	Kimbrough, E.M, Dunham, C.M, Nguyen, H.A.
Deposit date:	2023-11-15
Release date:	2025-07-09
Method:	ELECTRON MICROSCOPY (3.7 Å)
Cite:	An RNA modification prevents extended codon-anticodon interactions from facilitating +1 frameshifting Nat Commun, 2025

5CZP

70S termination complex containing E. coli RF2
Descriptor:	16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:	Hoffer, E.D, Dunham, C.M.
Deposit date:	2015-07-31
Release date:	2016-10-12
Last modified:	2025-03-19
Method:	X-RAY DIFFRACTION (3.29995918 Å)
Cite:	Uniformity of Peptide Release Is Maintained by Methylation of Release Factors. Cell Rep, 17, 2016

4L71

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome
Descriptor:	16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:	Maehigashi, T, Dunkle, J.A, Dunham, C.M.
Deposit date:	2013-06-13
Release date:	2014-08-06
Last modified:	2024-10-30
Method:	X-RAY DIFFRACTION (3.900001 Å)
Cite:	Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops. Proc.Natl.Acad.Sci.USA, 111, 2014

4MCT

P. vulgaris HIGBA structure, crystal form 1
Descriptor:	Antidote protein, Killer protein
Authors:	Schureck, M.A, Maehigashi, T, Dunham, C.M.
Deposit date:	2013-08-21
Release date:	2013-12-11
Last modified:	2024-10-09
Method:	X-RAY DIFFRACTION (2.8 Å)
Cite:	Structure of the Proteus vulgaris HigB-(HigA)2-HigB Toxin-Antitoxin Complex. J.Biol.Chem., 289, 2014

4MCX

P. vulgaris HIGBA structure, crystal form 2
Descriptor:	Antidote protein, Killer protein
Authors:	Schureck, M.A, Maehigashi, T, Dunham, C.M.
Deposit date:	2013-08-21
Release date:	2013-12-11
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	Structure of the Proteus vulgaris HigB-(HigA)2-HigB Toxin-Antitoxin Complex. J.Biol.Chem., 289, 2014

4PX8

Structure of P. vulgaris HigB toxin
Descriptor:	CHLORIDE ION, Killer protein
Authors:	Schureck, M.A, Dunkle, J.A, Maehigashi, T, Dunham, C.M.
Deposit date:	2014-03-22
Release date:	2015-10-21
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (1.25 Å)
Cite:	Defining the mRNA recognition signature of a bacterial toxin protein. Proc.Natl.Acad.Sci.USA, 112, 2015

4Q2U

Crystal structure of the E. coli DinJ-YafQ toxin-antitoxin complex
Descriptor:	Antitoxin DinJ, SULFATE ION, mRNA interferase YafQ
Authors:	Maehigashi, T, Ruangprasert, A, Dunham, C.M.
Deposit date:	2014-04-09
Release date:	2014-06-11
Last modified:	2024-11-06
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Mechanisms of Toxin Inhibition and Transcriptional Repression by Escherichia coli DinJ-YafQ. J.Biol.Chem., 289, 2014

4LNT

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome
Descriptor:	16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:	Maehigashi, T, Dunkle, J.A, Dunham, C.M.
Deposit date:	2013-07-12
Release date:	2014-08-06
Last modified:	2024-11-27
Method:	X-RAY DIFFRACTION (2.94 Å)
Cite:	Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops. Proc.Natl.Acad.Sci.USA, 111, 2014

4LSK

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome
Descriptor:	16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:	Maehigashi, T, Dunkle, J.A, Dunham, C.M.
Deposit date:	2013-07-22
Release date:	2014-08-06
Last modified:	2024-11-06
Method:	X-RAY DIFFRACTION (3.48000622 Å)
Cite:	Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops. Proc.Natl.Acad.Sci.USA, 111, 2014

4LT8

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome
Descriptor:	16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:	Maehigashi, T, Dunkle, J.A, Dunham, C.M.
Deposit date:	2013-07-23
Release date:	2014-08-06
Last modified:	2024-11-06
Method:	X-RAY DIFFRACTION (3.14000177 Å)
Cite:	Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops. Proc.Natl.Acad.Sci.USA, 111, 2014

4TUA

Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome
Descriptor:	16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:	Fagan, C.E, Dunham, C.M.
Deposit date:	2014-06-24
Release date:	2015-05-13
Last modified:	2024-11-06
Method:	X-RAY DIFFRACTION (3.6 Å)
Cite:	Structural insights into translational recoding by frameshift suppressor tRNASufJ. Rna, 20, 2014

4TUE

Crystal structure of ASL-SufJ bound to Codon ACC-U on the Ribosome
Descriptor:	16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:	Fagan, C.E, Dunham, C.M.
Deposit date:	2014-06-24
Release date:	2015-05-13
Last modified:	2024-11-13
Method:	X-RAY DIFFRACTION (3.5 Å)
Cite:	Structural insights into translational recoding by frameshift suppressor tRNASufJ. Rna, 20, 2014

4TUC

Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome
Descriptor:	16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:	Fagan, C.E, Dunham, C.M.
Deposit date:	2014-06-24
Release date:	2015-05-13
Last modified:	2024-10-16
Method:	X-RAY DIFFRACTION (3.6 Å)
Cite:	Structural insights into translational recoding by frameshift suppressor tRNASufJ. Rna, 20, 2014

4TUD

Crystal structure of ASL-SufJ bound to Codon ACC-C on the Ribosome
Descriptor:	16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:	Fagan, C.E, Dunham, C.M.
Deposit date:	2014-06-24
Release date:	2015-05-13
Last modified:	2024-10-23
Method:	X-RAY DIFFRACTION (3.6 Å)
Cite:	Structural insights into translational recoding by frameshift suppressor tRNASufJ. Rna, 20, 2014

4TUB

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome
Descriptor:	16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:	Fagan, C.E, Dunham, C.M.
Deposit date:	2014-06-24
Release date:	2015-05-13
Last modified:	2024-11-20
Method:	X-RAY DIFFRACTION (3.6 Å)
Cite:	Structural insights into translational recoding by frameshift suppressor tRNASufJ. Rna, 20, 2014

4OX9

Crystal structure of the aminoglycoside resistance methyltransferase NpmA bound to the 30S ribosomal subunit
Descriptor:	16S rRNA, 16S rRNA (adenine(1408)-N(1))-methyltransferase, 30S ribosomal protein S10, ...
Authors:	Dunkle, J.A, Conn, G.L, Dunham, C.M.
Deposit date:	2014-02-04
Release date:	2014-04-09
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (3.8035 Å)
Cite:	Molecular recognition and modification of the 30S ribosome by the aminoglycoside-resistance methyltransferase NpmA. Proc.Natl.Acad.Sci.USA, 111, 2014

4P6F

Crystal structure of the peptolide 12C bound to bacterial ribosome
Descriptor:	16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:	Fagan, C.E, Dunham, C.M.
Deposit date:	2014-03-24
Release date:	2014-10-01
Last modified:	2024-10-30
Method:	X-RAY DIFFRACTION (3.6 Å)
Cite:	Macrolide-Peptide Conjugates as Probes of the Path of Travel of the Nascent Peptides through the Ribosome. Acs Chem.Biol., 9, 2014

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