Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6ALQ
DownloadVisualize
BU of 6alq by Molmil
VioC L-arginine hydroxylase bound to Fe(II), L-arginine, and succinate
Descriptor: ARGININE, Alpha-ketoglutarate-dependent L-arginine hydroxylase, FE (II) ION, ...
Authors:Dunham, N.P, Mitchell, A.J, Boal, A.K.
Deposit date:2017-08-08
Release date:2017-09-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Visualizing the Reaction Cycle in an Iron(II)- and 2-(Oxo)-glutarate-Dependent Hydroxylase.
J. Am. Chem. Soc., 139, 2017
6AMN
DownloadVisualize
BU of 6amn by Molmil
Crystal Structure of Hsp104 N Domain
Descriptor: Heat shock protein 104
Authors:Lee, S.
Deposit date:2017-08-10
Release date:2017-11-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.816 Å)
Cite:Overlapping and Specific Functions of the Hsp104 N Domain Define Its Role in Protein Disaggregation.
Sci Rep, 7, 2017
6ALW
DownloadVisualize
BU of 6alw by Molmil
The crystal structure of the Staphylococcus aureus Fatty acid Kinase (Fak) B1 protein loaded with 12-Methyl Myristic Acid (C15:0) to 1.63 Angstrom resolution
Descriptor: (12R)-12-methyltetradecanoic acid, (12S)-12-methyltetradecanoic acid, EDD domain protein, ...
Authors:Cuypers, M.G, Ericson, M, Subramanian, C, White, S.W, Rock, C.O.
Deposit date:2017-08-08
Release date:2018-11-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Acyl-chain selectivity and physiological roles ofStaphylococcus aureusfatty acid-binding proteins.
J. Biol. Chem., 294, 2019
6ALR
DownloadVisualize
BU of 6alr by Molmil
VioC L-arginine hydroxylase bound to the vanadyl ion, L-arginine, and succinate
Descriptor: ARGININE, Alpha-ketoglutarate-dependent L-arginine hydroxylase, SUCCINIC ACID, ...
Authors:Mitchell, A.J, Dunham, N.P, Bergman, J.A, Boal, A.K.
Deposit date:2017-08-08
Release date:2017-09-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Visualizing the Reaction Cycle in an Iron(II)- and 2-(Oxo)-glutarate-Dependent Hydroxylase.
J. Am. Chem. Soc., 139, 2017
6ALP
DownloadVisualize
BU of 6alp by Molmil
VioC L-arginine hydroxylase bound to Fe(II), 3S-hydroxy-L-arginine, and succinate
Descriptor: (2S,3S)-3-HYDROXYARGININE, Alpha-ketoglutarate-dependent L-arginine hydroxylase, FE (II) ION, ...
Authors:Mitchell, A.J, Dunham, N.P, Boal, A.K.
Deposit date:2017-08-08
Release date:2017-09-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Visualizing the Reaction Cycle in an Iron(II)- and 2-(Oxo)-glutarate-Dependent Hydroxylase.
J. Am. Chem. Soc., 139, 2017
6AHZ
DownloadVisualize
BU of 6ahz by Molmil
The NMR Structure of the Polysialyltranseferase Domain (PSTD) in Polysialyltransferase ST8siaIV
Descriptor: CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase
Authors:Liu, X.H, Lu, B, Peng, L.X, Liao, S.M, Zhou, F, Chen, D, Lu, Z.L, Zhou, G.P, Huang, R.B.
Deposit date:2018-08-21
Release date:2018-10-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Inhibition of Polysialyltranseferase ST8SiaIV Through Heparin Binding to Polysialyltransferase Domain (PSTD).
Med Chem, 15, 2019
6B23
DownloadVisualize
BU of 6b23 by Molmil
Capsid protein and C-terminal part of CpmB protein in the Staphylococcus aureus pathogenicity island 1 80alpha-derived procapsid
Descriptor: Capsid morphogenesis B protein, Major head protein
Authors:Kizziah, J.L, Dearborn, A.D, Dokland, T.
Deposit date:2017-09-19
Release date:2017-10-18
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Competing scaffolding proteins determine capsid size during mobilization ofStaphylococcus aureuspathogenicity islands.
Elife, 6, 2017
6B5X
DownloadVisualize
BU of 6b5x by Molmil
Beta-Lactamase, unmixed shards crystal form
Descriptor: Beta-lactamase, PHOSPHATE ION
Authors:Pandey, S.
Deposit date:2017-09-29
Release date:2018-06-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Enzyme intermediates captured "on the fly" by mix-and-inject serial crystallography.
BMC Biol., 16, 2018
6B6F
DownloadVisualize
BU of 6b6f by Molmil
Beta-Lactamase, mixed with Ceftriaxone, needles crystal form, 2sec
Descriptor: Beta-lactamase, Ceftriaxone
Authors:Pandey, S, Schmidt, M.
Deposit date:2017-10-01
Release date:2018-06-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Enzyme intermediates captured "on the fly" by mix-and-inject serial crystallography.
BMC Biol., 16, 2018
6ANR
DownloadVisualize
BU of 6anr by Molmil
Crystal structure of a self resistance protein ClbS from colibactin biosynthetic gene cluster
Descriptor: Colibactin self-protection protein ClbS
Authors:Tripathi, P, Bruner, S.D.
Deposit date:2017-08-14
Release date:2018-06-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.098 Å)
Cite:ClbS Is a Cyclopropane Hydrolase That Confers Colibactin Resistance.
J. Am. Chem. Soc., 139, 2017
6AVD
DownloadVisualize
BU of 6avd by Molmil
Exploring Cystine Dense Peptide Space to Open a Unique Molecular Toolbox
Descriptor: Potassium channel toxin alpha-KTx 6.9, SULFATE ION
Authors:Gewe, M.M, Rupert, P, Strong, R.K.
Deposit date:2017-09-01
Release date:2018-02-28
Last modified:2018-03-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Screening, large-scale production and structure-based classification of cystine-dense peptides.
Nat. Struct. Mol. Biol., 25, 2018
6AT9
DownloadVisualize
BU of 6at9 by Molmil
Crystal structure of an anaplastic lymphoma kinase-derived neuroblastoma tumor antigen bound to the Human Major Histocompatibility Complex Class I molecule HLA-A*0101
Descriptor: ALK, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:Toor, J, Rao, A.A, Salama, S, Tripathi, S, Haussler, D, Sgourakis, N.G.
Deposit date:2017-08-28
Release date:2018-03-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9503 Å)
Cite:A Recurrent Mutation in Anaplastic Lymphoma Kinase with Distinct Neoepitope Conformations.
Front Immunol, 9, 2018
6BFI
DownloadVisualize
BU of 6bfi by Molmil
Vinculin homolog in a sponge (phylum Porifera) reveals vertebrate-like cell adhesions involved in early multicellular evolution
Descriptor: VIN1
Authors:Weis, W.I, Chodaparambil, J.V.
Deposit date:2017-10-26
Release date:2018-06-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Analysis of a vinculin homolog in a sponge (phylum Porifera) reveals that vertebrate-like cell adhesions emerged early in animal evolution.
J. Biol. Chem., 293, 2018
6AQ1
DownloadVisualize
BU of 6aq1 by Molmil
The crystal structure of human FABP3
Descriptor: Fatty acid-binding protein, heart, PALMITIC ACID, ...
Authors:Hsu, H.C, Li, H.
Deposit date:2017-08-18
Release date:2018-06-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.40000093 Å)
Cite:SAR studies on truxillic acid mono esters as a new class of antinociceptive agents targeting fatty acid binding proteins.
Eur J Med Chem, 154, 2018
2PMQ
DownloadVisualize
BU of 2pmq by Molmil
Crystal structure of a mandelate racemase/muconate lactonizing enzyme from Roseovarius sp. HTCC2601
Descriptor: MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme
Authors:Bonanno, J.B, Rutter, M, Bain, K.T, Lau, C, Sridhar, V, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-04-23
Release date:2007-05-08
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Discovery of new enzymes and metabolic pathways by using structure and genome context.
Nature, 502, 2013
5J7T
DownloadVisualize
BU of 5j7t by Molmil
Molecular Understanding of USP7 Substrate Recognition and C-Terminal Activation
Descriptor: Ubiquitin carboxyl-terminal hydrolase 7
Authors:Murray, J.M, Rouge, L.
Deposit date:2016-04-06
Release date:2016-08-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.2001 Å)
Cite:Molecular Understanding of USP7 Substrate Recognition and C-Terminal Activation.
Structure, 24, 2016
3ZX9
DownloadVisualize
BU of 3zx9 by Molmil
Cryo-EM reconstruction of native and expanded Turnip Crinkle virus
Descriptor: CAPSID PROTEIN
Authors:Bakker, S.E, Robottom, J, Pearson, A.R, Stockley, P.G, Ranson, N.A.
Deposit date:2011-08-08
Release date:2012-07-18
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (17 Å)
Cite:Isolation of an Asymmetric RNA Uncoating Intermediate for a Single-Stranded RNA Plant Virus.
J.Mol.Biol., 417, 2012
2PZF
DownloadVisualize
BU of 2pzf by Molmil
Minimal human CFTR first nucleotide binding domain as a head-to-tail dimer with delta F508
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cystic fibrosis transmembrane conductance regulator, MAGNESIUM ION
Authors:Atwell, S, Conners, K, Emtage, S, Gheyi, T, Glenn, N.R, Hendle, J, Lewis, H.A, Lu, F, Rodgers, L.A, Romero, R, Sauder, J.M, Smith, D, Tien, H, Wasserman, S.R, Zhao, X.
Deposit date:2007-05-18
Release date:2007-10-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of a minimal human CFTR first nucleotide-binding domain as a monomer, head-to-tail homodimer, and pathogenic mutant.
Protein Eng.Des.Sel., 23, 2010
3ZDU
DownloadVisualize
BU of 3zdu by Molmil
Crystal structure of the human CDKL3 kinase domain
Descriptor: 1,2-ETHANEDIOL, CYCLIN-DEPENDENT KINASE-LIKE 3, SODIUM ION, ...
Authors:Canning, P, Elkins, J.M, Goubin, S, Mahajan, P, Pike, A.C.W, Quigley, A, MacKenzie, A, Carpenter, E.P, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A.
Deposit date:2012-11-30
Release date:2013-03-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:CDKL Family Kinases Have Evolved Distinct Structural Features and Ciliary Function.
Cell Rep, 22, 2018
2PYB
DownloadVisualize
BU of 2pyb by Molmil
Napa protein from borrelia burgdorferi
Descriptor: FE (III) ION, Neutrophil activating protein
Authors:Zanotti, G, Papinutto, E, De Bernard, M.
Deposit date:2007-05-16
Release date:2008-08-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and immunomodulatory property relationship in NapA of Borrelia burgdorferi.
Biochim.Biophys.Acta, 1804, 2010
5J1B
DownloadVisualize
BU of 5j1b by Molmil
structure of the core domaine of Knr4, an intrinsically disordered protein from Saccharomyces cerevisiae - WT.
Descriptor: Cell wall assembly regulator SMI1
Authors:Maveyraud, L, Batista, M, Martin-yken, H, Francois, J.M, Zerbib, D, Mourey, L.
Deposit date:2016-03-29
Release date:2017-04-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and biophysical characterization of Knr4, an intrinsically disordered hub protein form Saccharomyces cerevisiae
To Be Published
2Q44
DownloadVisualize
BU of 2q44 by Molmil
Ensemble refinement of the protein crystal structure of gene product from Arabidopsis thaliana At1g77540
Descriptor: BROMIDE ION, Uncharacterized protein At1g77540
Authors:Levin, E.J, Kondrashov, D.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2007-05-31
Release date:2007-06-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Ensemble refinement of protein crystal structures: validation and application.
Structure, 15, 2007
2Q7C
DownloadVisualize
BU of 2q7c by Molmil
Crystal structure of IQN17
Descriptor: CHLORIDE ION, fusion protein between yeast variant GCN4 and HIVgp41
Authors:Malashkevich, V.N, Eckert, D.M, Hong, L.H, Kim, P.S.
Deposit date:2007-06-06
Release date:2007-06-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Inhibiting HIV Entry: Discovery of D-Peptide Inhibitors that Target the Gp41 Coiled-Coil Pocket
Cell(Cambridge,Mass.), 99, 1999
2Q3I
DownloadVisualize
BU of 2q3i by Molmil
Crystal structure of the D10-P3/IQN17 complex: a D-peptide inhibitor of HIV-1 entry bound to the GP41 coiled-coil pocket
Descriptor: CHLORIDE ION, D-peptide, Fusion protein between the Coiled-Coil pocket of HIV GP41 and gcn4-PIQI
Authors:Malashkevich, V.N, Eckert, D.M, Hong, L.H, Carr, P.A, Kim, P.S.
Deposit date:2007-05-30
Release date:2007-06-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Inhibiting HIV Entry: Discovery of D-Peptide Inhibitors that Target the Gp41 Coiled-Coil Pocket
Cell(Cambridge,Mass.), 99, 1999
5HI5
DownloadVisualize
BU of 5hi5 by Molmil
Binding site elucidation and structure guided design of macrocyclic IL-17A antagonists
Descriptor: (4S,20R)-7-chloro-N-methyl-4-{[(1-methyl-1H-pyrazol-5-yl)carbonyl]amino}-3,18-dioxo-2,19-diazatetracyclo[20.2.2.1~6,10~.1~11,15~]octacosa-1(24),6(28),7,9,11(27),12,14,22,25-nonaene-20-carboxamide, CAT-2000 FAB heavy chain, CAT-2000 light chain, ...
Authors:Liu, S.
Deposit date:2016-01-11
Release date:2016-08-31
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Binding site elucidation and structure guided design of macrocyclic IL-17A antagonists.
Sci Rep, 6, 2016

226707

数据于2024-10-30公开中

PDB statisticsPDBj update infoContact PDBjnumon