Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6MU6
DownloadVisualize
BU of 6mu6 by Molmil
Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to Small Molecule HIV-1 Entry Inhibitor BMS-814508 in Complex with Human Antibodies 3H109L and 35O22 at 3.2 Angstrom
Descriptor: (2R)-{1-[{7-[2-({[3-(dimethylamino)propyl](methyl)amino}methyl)-1,3-thiazol-4-yl]-4-methoxy-1H-pyrrolo[2,3-c]pyridin-3-yl}(oxo)acetyl]piperidin-4-yl}(phenyl)acetonitrile, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Lai, Y.-T, Kwong, P.D.
Deposit date:2018-10-22
Release date:2019-01-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.551 Å)
Cite:Lattice engineering enables definition of molecular features allowing for potent small-molecule inhibition of HIV-1 entry.
Nat Commun, 10, 2019
5WDF
DownloadVisualize
BU of 5wdf by Molmil
Crystal structure of 10E8v4-5R+100cF Fab in complex with HIV-1 gp41 peptide
Descriptor: 10E8v4-5R+100cF Fab heavy chain, FA10E8v4-5R+100cF FAB light chain, HIV-1 gp41 peptide
Authors:Kwon, Y.D, Kwong, P.D.
Deposit date:2017-07-05
Release date:2018-03-21
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Surface-Matrix Screening Identifies Semi-specific Interactions that Improve Potency of a Near Pan-reactive HIV-1-Neutralizing Antibody.
Cell Rep, 22, 2018
5TE4
DownloadVisualize
BU of 5te4 by Molmil
Crystal Structure of Broadly Neutralizing VRC01-class Antibody N6 in Complex with HIV-1 Clade G Strain X2088 gp120 Core
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, (R,R)-2,3-BUTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhou, T, Kwong, P.D.
Deposit date:2016-09-20
Release date:2016-11-23
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Identification of a CD4-Binding-Site Antibody to HIV that Evolved Near-Pan Neutralization Breadth.
Immunity, 45, 2016
8TJR
DownloadVisualize
BU of 8tjr by Molmil
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO HERH-a.01 FAB
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody HERH-a.01 Heavy Chain, ...
Authors:Morano, N.C, Hoyt, F, Hansen, B, Fischer, E, Shapiro, L.
Deposit date:2023-07-24
Release date:2024-07-31
Last modified:2025-02-19
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Potent and broad HIV-1 neutralization in fusion peptide-primed SHIV-infected macaques.
Cell, 187, 2024
8TO7
DownloadVisualize
BU of 8to7 by Molmil
Cryo-EM structure of HERH-b*01 Fab in complex with HIV-1 Env trimer BG505.DS SOSIP
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HERH-b*01 heavy chain, ...
Authors:Roark, R.S, Hoyt, F, Hansen, B, Fischer, E, Shapiro, L.S, Kwong, P.D.
Deposit date:2023-08-03
Release date:2024-08-07
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Potent and broad HIV-1 neutralization in fusion peptide-primed SHIV-infected macaques.
Cell, 187, 2024
5TE6
DownloadVisualize
BU of 5te6 by Molmil
Crystal Structure of Broadly Neutralizing VRC01-class Antibody N6 in Complex with HIV-1 Clade AE Strain 93TH057 gp120 Core
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Heavy chain of N6, ...
Authors:Zhou, T, Kwong, P.D.
Deposit date:2016-09-20
Release date:2016-11-16
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Identification of a CD4-Binding-Site Antibody to HIV that Evolved Near-Pan Neutralization Breadth.
Immunity, 45, 2016
5TE7
DownloadVisualize
BU of 5te7 by Molmil
Crystal Structure of Broadly Neutralizing VRC01-class Antibody N6 in Complex with HIV-1 Clade C Strain DU172.17 gp120 Core
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Zhou, T, Kwong, P.D.
Deposit date:2016-09-20
Release date:2016-11-16
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Identification of a CD4-Binding-Site Antibody to HIV that Evolved Near-Pan Neutralization Breadth.
Immunity, 45, 2016
8ZF4
DownloadVisualize
BU of 8zf4 by Molmil
Cryo-EM structure of the receptor of xGPR4-Gs complex in pH6.2
Descriptor: G-protein coupled receptor 4
Authors:Rong, N.K, Wen, X, Yang, F, Sun, J.P.
Deposit date:2024-05-07
Release date:2025-02-26
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Evolutionary study and structural basis of proton sensing by Mus GPR4 and Xenopus GPR4.
Cell, 188, 2025
8ZFB
DownloadVisualize
BU of 8zfb by Molmil
Cryo-EM structure of the receptor of xtGPR4-Gs complex in pH7.2
Descriptor: G-protein coupled receptor 4
Authors:Rong, N.K, Wen, X, Yang, F, Sun, J.P.
Deposit date:2024-05-07
Release date:2025-02-26
Method:ELECTRON MICROSCOPY (3.78 Å)
Cite:Evolutionary study and structural basis of proton sensing by Mus GPR4 and Xenopus GPR4.
Cell, 188, 2025
8ZF7
DownloadVisualize
BU of 8zf7 by Molmil
Cryo-EM structure of the receptor of xGPR4-Gs complex in pH6.7
Descriptor: G-protein coupled receptor 4
Authors:Rong, N.K, Wen, X, Yang, F, Sun, J.P.
Deposit date:2024-05-07
Release date:2025-02-26
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Evolutionary study and structural basis of proton sensing by Mus GPR4 and Xenopus GPR4.
Cell, 188, 2025
8ZFC
DownloadVisualize
BU of 8zfc by Molmil
Cryo-EM structure of the mmGPR4-Gs complex in pH7.6
Descriptor: G-protein coupled receptor 4, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Wen, X, Rong, N.K, Yang, F, Sun, J.P.
Deposit date:2024-05-07
Release date:2025-02-26
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:Evolutionary study and structural basis of proton sensing by Mus GPR4 and Xenopus GPR4.
Cell, 188, 2025
8ZFE
DownloadVisualize
BU of 8zfe by Molmil
Cryo-EM structure of the mmGPR4-Gs receptor in pH7.2
Descriptor: G-protein coupled receptor 4
Authors:Wen, X, Rong, N.K, Yang, F, Sun, J.P.
Deposit date:2024-05-07
Release date:2025-02-26
Method:ELECTRON MICROSCOPY (2.56 Å)
Cite:Evolutionary study and structural basis of proton sensing by Mus GPR4 and Xenopus GPR4.
Cell, 188, 2025
8ZFA
DownloadVisualize
BU of 8zfa by Molmil
Cryo-EM structure of the xtGPR4-Gs complex in pH7.2
Descriptor: G-protein coupled receptor 4, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Rong, N.K, Wen, X, Yang, F, Sun, J.P.
Deposit date:2024-05-07
Release date:2025-02-26
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Evolutionary study and structural basis of proton sensing by Mus GPR4 and Xenopus GPR4.
Cell, 188, 2025
8ZF9
DownloadVisualize
BU of 8zf9 by Molmil
Cryo-EM structure of the mmGPR4-Gs complex in pH7.2
Descriptor: G-protein coupled receptor 4, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Wen, X, Rong, N.K, Yang, F, Sun, J.P.
Deposit date:2024-05-07
Release date:2025-02-26
Method:ELECTRON MICROSCOPY (2.56 Å)
Cite:Evolutionary study and structural basis of proton sensing by Mus GPR4 and Xenopus GPR4.
Cell, 188, 2025
8ZD1
DownloadVisualize
BU of 8zd1 by Molmil
Cryo-EM structure of the xGPR4-Gs complex in pH6.2
Descriptor: G-protein coupled receptor 4, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Rong, N.K, Wen, X, Yang, F, Sun, J.P.
Deposit date:2024-04-30
Release date:2025-02-26
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Evolutionary study and structural basis of proton sensing by Mus GPR4 and Xenopus GPR4.
Cell, 188, 2025
8ZF6
DownloadVisualize
BU of 8zf6 by Molmil
Cryo-EM structure of the xGPR4-Gs complex in pH6.7
Descriptor: G-protein coupled receptor 4, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Rong, N.K, Wen, X, Yang, F, Sun, J.P.
Deposit date:2024-05-07
Release date:2025-02-26
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Evolutionary study and structural basis of proton sensing by Mus GPR4 and Xenopus GPR4.
Cell, 188, 2025
8ZFD
DownloadVisualize
BU of 8zfd by Molmil
Cryo-EM structure of the mmGPR4-Gs receptor in pH7.6
Descriptor: G-protein coupled receptor 4
Authors:Wen, X, Rong, N.K, Yang, F, Sun, J.P.
Deposit date:2024-05-07
Release date:2025-02-26
Method:ELECTRON MICROSCOPY (2.56 Å)
Cite:Evolutionary study and structural basis of proton sensing by Mus GPR4 and Xenopus GPR4.
Cell, 188, 2025
6KVM
DownloadVisualize
BU of 6kvm by Molmil
Crystal structure of Chicken MHC Class II for 1.9 angstrom
Descriptor: GLYCEROL, MHC class II alpha chain, MHC class II beta chain 2, ...
Authors:Zhang, L, Xia, C.
Deposit date:2019-09-04
Release date:2019-12-25
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.897 Å)
Cite:A Newly Recognized Pairing Mechanism of the alpha- and beta-Chains of the Chicken Peptide-MHC Class II Complex.
J Immunol., 204, 2020
7RI2
DownloadVisualize
BU of 7ri2 by Molmil
Crystal structure of anti-HIV llama VHH antibody A12 in complex with HIV-1 C1086 gp120
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoprotein 120, anti-HIV llama VHH antibody A12
Authors:Zhou, T, Kwong, P.D.
Deposit date:2021-07-19
Release date:2022-03-30
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for llama nanobody recognition and neutralization of HIV-1 at the CD4-binding site.
Structure, 30, 2022
7RI1
DownloadVisualize
BU of 7ri1 by Molmil
Crystal structure of anti-HIV llama VHH antibody J3 in complex with HIV-1 C1086 gp120
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoprotein 120, Lamma VHH antibody J3, ...
Authors:Zhou, T, Kwong, P.D.
Deposit date:2021-07-19
Release date:2022-03-30
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural basis for llama nanobody recognition and neutralization of HIV-1 at the CD4-binding site.
Structure, 30, 2022
7BVC
DownloadVisualize
BU of 7bvc by Molmil
Cryo-EM structure of Mycobacterium smegmatis arabinosyltransferase EmbA-EmbB-AcpM2 in complex with ethambutol
Descriptor: 4'-PHOSPHOPANTETHEINE, CALCIUM ION, CARDIOLIPIN, ...
Authors:Zhang, L, Zhao, Y, Gao, Y, Wang, Q, Li, J, Besra, G.S, Rao, Z.
Deposit date:2020-04-10
Release date:2020-04-29
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structures of cell wall arabinosyltransferases with the anti-tuberculosis drug ethambutol.
Science, 368, 2020
7BVE
DownloadVisualize
BU of 7bve by Molmil
Cryo-EM structure of Mycobacterium smegmatis arabinosyltransferase EmbC2-AcpM2 in complex with ethambutol
Descriptor: CALCIUM ION, Ethambutol, Integral membrane indolylacetylinositol arabinosyltransferase EmbC, ...
Authors:Zhang, L, Zhao, Y, Gao, Y, Wang, Q, Li, J, Besra, G.S, Rao, Z.
Deposit date:2020-04-10
Release date:2020-04-29
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (2.81 Å)
Cite:Structures of cell wall arabinosyltransferases with the anti-tuberculosis drug ethambutol.
Science, 368, 2020
7BVF
DownloadVisualize
BU of 7bvf by Molmil
Cryo-EM structure of Mycobacterium tuberculosis arabinosyltransferase EmbA-EmbB-AcpM2 in complex with ethambutol
Descriptor: CALCIUM ION, CARDIOLIPIN, Ethambutol, ...
Authors:Zhang, L, Zhao, Y, Gao, Y, Wang, Q, Li, J, Besra, G.S, Rao, Z.
Deposit date:2020-04-10
Release date:2020-04-29
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Structures of cell wall arabinosyltransferases with the anti-tuberculosis drug ethambutol.
Science, 368, 2020
7Y89
DownloadVisualize
BU of 7y89 by Molmil
Structure of the GPR17-Gi complex
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Ye, F, Chen, G.
Deposit date:2022-06-23
Release date:2022-10-12
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.02 Å)
Cite:Cryo-EM structure of G-protein-coupled receptor GPR17 in complex with inhibitory G protein.
MedComm (2020), 3, 2022
7YNX
DownloadVisualize
BU of 7ynx by Molmil
Crystal structure of Pirh2 bound to poly-Ala peptide
Descriptor: RING finger and CHY zinc finger domain-containing protein 1, SODIUM ION, SULFATE ION, ...
Authors:Dong, C, Yan, X, Li, Y.
Deposit date:2022-08-01
Release date:2023-04-26
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Recognition of an Ala-rich C-degron by the E3 ligase Pirh2.
Nat Commun, 14, 2023

238582

数据于2025-07-09公开中

PDB statisticsPDBj update infoContact PDBjnumon