Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4JPR
DownloadVisualize
BU of 4jpr by Molmil
Structure of the ASLV fusion subunit core
Descriptor: ASLV fusion TM, CHLORIDE ION
Authors:Aydin, H, Smrke, B.M, Lee, J.E.
Deposit date:2013-03-19
Release date:2013-10-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural characterization of a fusion glycoprotein from a retrovirus that undergoes a hybrid 2-step entry mechanism.
Faseb J., 27, 2013
3MMS
DownloadVisualize
BU of 3mms by Molmil
Crystal structure of Streptococcus pneumoniae MTA/SAH nucleosidase in complex with 8-aminoadenine
Descriptor: 5'-methylthioadenosine / S-adenosylhomocysteine nucleosidase, 9H-purine-6,8-diamine, GLYCEROL
Authors:Siu, K.K.W, Lee, J.E, Horvatin-Mrakovcic, C, Howell, P.L.
Deposit date:2010-04-20
Release date:2010-05-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of Streptococcus pneumoniae MTA/SAH nucleosidase in complex with 8-aminoadenine
TO BE PUBLISHED
4JF3
DownloadVisualize
BU of 4jf3 by Molmil
Crystal structure of the mpmv tm retroviral fusion core
Descriptor: CHLORIDE ION, Envelope glycoprotein
Authors:Cook, J.D, Aydin, H, Lee, J.E.
Deposit date:2013-02-27
Release date:2013-10-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of Beta- and gammaretrovirus fusion proteins reveal a role for electrostatic stapling in viral entry.
J.Virol., 88, 2014
6BVB
DownloadVisualize
BU of 6bvb by Molmil
Crystal structure of HIF-2alpha-pVHL-elongin B-elongin C
Descriptor: Elongin-B, Elongin-C, Hypoxia-Inducible Factor 2 alpha, ...
Authors:Tarade, D, Ohh, M, Lee, J.E.
Deposit date:2017-12-12
Release date:2018-08-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:HIF-2 alpha-pVHL complex reveals broad genotype-phenotype correlations in HIF-2 alpha-driven disease.
Nat Commun, 9, 2018
4JGS
DownloadVisualize
BU of 4jgs by Molmil
Crystal structure of the xmrv tm retroviral fusion core
Descriptor: CHLORIDE ION, MLV-related proviral Env polyprotein
Authors:Cook, J.D, Aydin, H, Lee, J.E.
Deposit date:2013-03-02
Release date:2013-10-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of Beta- and gammaretrovirus fusion proteins reveal a role for electrostatic stapling in viral entry.
J.Virol., 88, 2014
4J4J
DownloadVisualize
BU of 4j4j by Molmil
Crystal structure of the APOBEC3F Vif binding domain
Descriptor: DNA dC->dU-editing enzyme APOBEC-3F, ZINC ION
Authors:Siu, K.K, Sultana, A, Lee, J.E.
Deposit date:2013-02-06
Release date:2013-11-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural determinants of HIV-1 Vif susceptibility and DNA binding in APOBEC3F.
Nat Commun, 4, 2013
3TIO
DownloadVisualize
BU of 3tio by Molmil
Crystal structures of yrdA from Escherichia coli, a homologous protein of gamma-class carbonic anhydrase, show possible allosteric conformations
Descriptor: PHOSPHATE ION, Protein YrdA, ZINC ION
Authors:Park, H.M, Choi, J.W, Lee, J.E, Jung, C.H, Kim, B.Y, Kim, J.S.
Deposit date:2011-08-21
Release date:2012-08-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Structures of the gamma-class carbonic anhydrase homologue YrdA suggest a possible allosteric switch
Acta Crystallogr.,Sect.D, 68, 2012
3TIS
DownloadVisualize
BU of 3tis by Molmil
Crystal structures of yrdA from Escherichia coli, a homologous protein of gamma-class carbonic anhydrases, show possible allosteric conformations
Descriptor: Protein YrdA, ZINC ION
Authors:Park, H.M, Chio, J.W, Lee, J.E, Jung, J.H, Kim, B.Y, Kim, J.S.
Deposit date:2011-08-21
Release date:2012-08-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of the gamma-class carbonic anhydrase homologue YrdA suggest a possible allosteric switch
Acta Crystallogr.,Sect.D, 68, 2012
7N07
DownloadVisualize
BU of 7n07 by Molmil
Crystal structure of the apo 3D6 antibody fragment
Descriptor: Fab 3D6 heavy chain, Fab 3D6 light chain, SULFATE ION
Authors:Cook, J.D, Lee, J.E.
Deposit date:2021-05-25
Release date:2022-03-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Conformational plasticity of the HIV-1 gp41 immunodominant region is recognized by multiple non-neutralizing antibodies.
Commun Biol, 5, 2022
7N04
DownloadVisualize
BU of 7n04 by Molmil
Crystal structure of the apo F240 antibody fragment
Descriptor: Fab F240 heavy chain, Fab F240 light chain, alpha-D-glucopyranose
Authors:Cook, J.D, Lee, J.E.
Deposit date:2021-05-25
Release date:2022-03-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.70000517 Å)
Cite:Conformational plasticity of the HIV-1 gp41 immunodominant region is recognized by multiple non-neutralizing antibodies.
Commun Biol, 5, 2022
7N08
DownloadVisualize
BU of 7n08 by Molmil
Crystal structure of the 3D6 antibody fragment bound to the HIV-1 gp41 immunodominant region
Descriptor: Fab 3D6 heavy chain, Fab 3D6 light chain, HIV-1 gp41 immunodominant region
Authors:Cook, J.D, Lee, J.E.
Deposit date:2021-05-25
Release date:2022-03-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformational plasticity of the HIV-1 gp41 immunodominant region is recognized by multiple non-neutralizing antibodies.
Commun Biol, 5, 2022
7N05
DownloadVisualize
BU of 7n05 by Molmil
Crystal structure of the F240 antibody fragment bound to the HIV-1 gp41 immunodominant region
Descriptor: ACETATE ION, Fab F240 heavy chain, Fab F240 light chain, ...
Authors:Cook, J.D, Lee, J.E.
Deposit date:2021-05-25
Release date:2022-03-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Conformational plasticity of the HIV-1 gp41 immunodominant region is recognized by multiple non-neutralizing antibodies.
Commun Biol, 5, 2022
5HA6
DownloadVisualize
BU of 5ha6 by Molmil
Crystal structure of human syncytin-1 fusion subunit
Descriptor: CHLORIDE ION, Syncytin-1
Authors:Aydin, H, Lee, J.E.
Deposit date:2015-12-30
Release date:2017-08-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.0006 Å)
Cite:Structural and functional characterization of the human Syncytin 1 fusion protein
To Be Published
5H9C
DownloadVisualize
BU of 5h9c by Molmil
Crystal structure of the ASLV fusion protein core
Descriptor: CHLORIDE ION, Envelope glycoprotein gp95
Authors:Aydin, H, Lee, J.E.
Deposit date:2015-12-28
Release date:2016-01-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.783 Å)
Cite:Structural characterization of a fusion glycoprotein from a retrovirus that undergoes a hybrid 2-step entry mechanism.
Faseb J., 27, 2013
5JFY
DownloadVisualize
BU of 5jfy by Molmil
Crystal structure of a plant cytidine deaminase
Descriptor: ACETATE ION, CHLORIDE ION, Deoxycytidine deaminase, ...
Authors:Taylor, M.W, Lee, J.E.
Deposit date:2016-04-19
Release date:2017-04-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:To be published
To Be Published
5F4E
DownloadVisualize
BU of 5f4e by Molmil
Crystal structure of the human sperm Izumo1 and egg Juno complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLYCEROL, ...
Authors:Aydin, H, Sultana, A, Lee, J.E.
Deposit date:2015-12-03
Release date:2016-06-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular architecture of the human sperm IZUMO1 and egg JUNO fertilization complex.
Nature, 534, 2016
5F4V
DownloadVisualize
BU of 5f4v by Molmil
Crystal structure of the human sperm Izumo1 residues 22-268
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Izumo sperm-egg fusion protein 1
Authors:Aydin, H, Sultana, A, Lee, J.E.
Deposit date:2015-12-03
Release date:2016-06-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Molecular architecture of the human sperm IZUMO1 and egg JUNO fertilization complex.
Nature, 534, 2016
5F4Q
DownloadVisualize
BU of 5f4q by Molmil
Crystal structure of the human egg surface protein Juno
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLYCEROL, ...
Authors:Aydin, H, Sultana, A, Lee, J.E.
Deposit date:2015-12-03
Release date:2016-06-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular architecture of the human sperm IZUMO1 and egg JUNO fertilization complex.
Nature, 534, 2016
5F4T
DownloadVisualize
BU of 5f4t by Molmil
Crystal structure of the human sperm Izumo1 residues 22-254
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Izumo sperm-egg fusion protein 1
Authors:Aydin, H, Sultana, A, Lee, J.E.
Deposit date:2015-12-03
Release date:2016-06-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.083 Å)
Cite:Molecular architecture of the human sperm IZUMO1 and egg JUNO fertilization complex.
Nature, 534, 2016
5T9Y
DownloadVisualize
BU of 5t9y by Molmil
Crystal structure of the infectious salmon anemia virus (ISAV) hemagglutinin-esterase protein
Descriptor: FORMIC ACID, GLYCEROL, HE protein, ...
Authors:Cook, J.D, Sultana, A, Lee, J.E.
Deposit date:2016-09-09
Release date:2017-03-22
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the infectious salmon anemia virus receptor complex illustrates a unique binding strategy for attachment.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5T96
DownloadVisualize
BU of 5t96 by Molmil
Crystal structure of the infectious salmon anemia virus (ISAV) HE viral receptor complex
Descriptor: 4-O-acetyl-5-acetamido-3,5-dideoxy-L-glycero-alpha-D-galacto-non-2-ulopyranosonic acid, FORMIC ACID, GLYCEROL, ...
Authors:Cook, J.D, Sultana, A, Lee, J.E.
Deposit date:2016-09-09
Release date:2017-03-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the infectious salmon anemia virus receptor complex illustrates a unique binding strategy for attachment.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
2QTG
DownloadVisualize
BU of 2qtg by Molmil
Crystal Structure of Arabidopsis thaliana 5'-Methylthioadenosine nucleosidase in complex with 5'-methylthiotubercidin
Descriptor: 1,2-ETHANEDIOL, 2-(4-AMINO-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-METHYLSULFANYLMETHYL-TETRAHYDRO-FURAN-3,4-DIOL, 5'-methylthioadenosine nucleosidase
Authors:Siu, K.K.W, Howell, P.L.
Deposit date:2007-08-02
Release date:2008-04-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Molecular determinants of substrate specificity in plant 5'-methylthioadenosine nucleosidases.
J.Mol.Biol., 378, 2008
2QTT
DownloadVisualize
BU of 2qtt by Molmil
Crystal Structure of Arabidopsis thaliana 5'-Methylthioadenosine nucleosidase in complex with Formycin A
Descriptor: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, 1,2-ETHANEDIOL, 5'-methylthioadenosine nucleosidase, ...
Authors:Siu, K.K.W, Howell, P.L.
Deposit date:2007-08-02
Release date:2008-04-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Molecular determinants of substrate specificity in plant 5'-methylthioadenosine nucleosidases.
J.Mol.Biol., 378, 2008
5Y3N
DownloadVisualize
BU of 5y3n by Molmil
Structure of TRAP1 complexed with DN401
Descriptor: 1-[(6-bromanyl-1,3-benzodioxol-5-yl)methyl]-4-chloranyl-pyrazolo[3,4-d]pyrimidin-6-amine, Heat shock protein 75 kDa, mitochondrial
Authors:Jeong, H, Park, H.K, Kang, S, Kang, B.H, Lee, C.
Deposit date:2017-07-29
Release date:2017-08-30
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Paralog Specificity Determines Subcellular Distribution, Action Mechanism, and Anticancer Activity of TRAP1 Inhibitors.
J. Med. Chem., 60, 2017
5Y3O
DownloadVisualize
BU of 5y3o by Molmil
Structure of TRAP1 complexed with DN320
Descriptor: 4-chloranyl-1-[(4-methoxy-3,5-dimethyl-pyridin-2-yl)methyl]pyrazolo[3,4-d]pyrimidin-6-amine, Heat shock protein 75 kDa, mitochondrial
Authors:Jeong, H, Park, H.K, Kang, S, Kang, B.H, Lee, C.
Deposit date:2017-07-29
Release date:2017-08-30
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Paralog Specificity Determines Subcellular Distribution, Action Mechanism, and Anticancer Activity of TRAP1 Inhibitors.
J. Med. Chem., 60, 2017

221051

数据于2024-06-12公开中

PDB statisticsPDBj update infoContact PDBjnumon