Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4G1V
DownloadVisualize
BU of 4g1v by Molmil
X-ray structure of yeast flavohemoglobin
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Flavohemoglobin, NITRITE ION, ...
Authors:El Hammi, E, Warkentin, E, Demmer, U, Baciou, L, Ermler, U.
Deposit date:2012-07-11
Release date:2012-11-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.098 Å)
Cite:Active site analysis of yeast flavohemoglobin based on its structure with a small ligand or econazole.
Febs J., 279, 2012
4G1B
DownloadVisualize
BU of 4g1b by Molmil
X-ray structure of yeast flavohemoglobin in complex with econazole
Descriptor: 1-[(2S)-2-[(4-CHLOROBENZYL)OXY]-2-(2,4-DICHLOROPHENYL)ETHYL]-1H-IMIDAZOLE, FLAVIN-ADENINE DINUCLEOTIDE, Flavohemoglobin, ...
Authors:El Hammi, E, Warkentin, E, Demmer, U, Baciou, L, Ermler, U.
Deposit date:2012-07-10
Release date:2012-11-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Active site analysis of yeast flavohemoglobin based on its structure with a small ligand or econazole.
Febs J., 279, 2012
4GVS
DownloadVisualize
BU of 4gvs by Molmil
X-ray structure of the Archaeoglobus fulgidus methenyl-tetrahydromethanopterin cyclohydrolase in complex with N5-formyl-tetrahydromethanopterin
Descriptor: 1-[4-({(1R)-1-[(6S,7R)-2-amino-5-formyl-7-methyl-4-oxo-1,4,5,6,7,8-hexahydropteridin-6-yl]ethyl}amino)phenyl]-1-deoxy-5 -O-{5-O-[(R)-{[(1R)-1,3-dicarboxypropyl]oxy}(hydroxy)phosphoryl]-alpha-D-ribofuranosyl}-D-ribitol, Methenyltetrahydromethanopterin cyclohydrolase
Authors:Upadhyay, V, Demmer, U, Warkentin, E, Moll, J, Shima, S, Ermler, U.
Deposit date:2012-08-31
Release date:2012-10-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure and catalytic mechanism of N(5),N(10)-methenyl-tetrahydromethanopterin cyclohydrolase.
Biochemistry, 51, 2012
4GVQ
DownloadVisualize
BU of 4gvq by Molmil
X-ray structure of the Archaeoglobus fulgidus methenyl-tetrahydromethanopterin cyclohydrolase in complex with tetrahydromethanpterin
Descriptor: 1-[4-({(1R)-1-[(6S,7S)-2-amino-7-methyl-4-oxo-1,4,5,6,7,8-hexahydropteridin-6-yl]ethyl}amino)phenyl]-1-deoxy-5-O-{5-O-[(R)-{[(1R)-1,3-dicarboxypropyl]oxy}(hydroxy)phosphoryl]-alpha-D-ribofuranosyl}-D-xylitol, Methenyltetrahydromethanopterin cyclohydrolase
Authors:Upadhyay, V, Demmer, U, Warkentin, E, Moll, J, Shima, S, Ermler, U.
Deposit date:2012-08-31
Release date:2012-10-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure and catalytic mechanism of N(5),N(10)-methenyl-tetrahydromethanopterin cyclohydrolase.
Biochemistry, 51, 2012
4GVR
DownloadVisualize
BU of 4gvr by Molmil
X-ray structure of the Archaeoglobus fulgidus methenyl-tetrahydromethanopterin cyclohydrolase
Descriptor: Methenyltetrahydromethanopterin cyclohydrolase
Authors:Upadhyay, V, Demmer, U, Warkentin, E, Moll, J, Shima, S, Ermler, U.
Deposit date:2012-08-31
Release date:2012-10-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structure and catalytic mechanism of N(5),N(10)-methenyl-tetrahydromethanopterin cyclohydrolase.
Biochemistry, 51, 2012
4NDO
DownloadVisualize
BU of 4ndo by Molmil
Crystal structure Molybdenum Storage Protein with fully Mo-loaded cavity
Descriptor: (mu3-oxo)-tris(mu2-oxo)-nonakisoxo-trimolybdenum (VI), ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Poppe, J, Warkentin, E, Demmer, U, Ermler, U.
Deposit date:2013-10-27
Release date:2014-08-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural diversity of polyoxomolybdate clusters along the three-fold axis of the molybdenum storage protein.
J.Inorg.Biochem., 138, 2014
4NDQ
DownloadVisualize
BU of 4ndq by Molmil
Crystal structure Molybdenum Storage Protein with fully Mo-loaded cavity
Descriptor: (mu3-oxo)-tris(mu2-oxo)-nonakisoxo-trimolybdenum (VI), ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Poppe, J, Warkentin, E, Demmer, U, Ermler, U.
Deposit date:2013-10-27
Release date:2014-08-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.751 Å)
Cite:Structural diversity of polyoxomolybdate clusters along the three-fold axis of the molybdenum storage protein.
J.Inorg.Biochem., 138, 2014
1LU9
DownloadVisualize
BU of 1lu9 by Molmil
Structure of methylene-tetrahydromethanopterin dehydrogenase from Methylobacterium extorquens AM1
Descriptor: Methylene Tetrahydromethanopterin Dehydrogenase
Authors:Ermler, U, Hagemeier, C.H, Roth, A, Demmer, U, Grabarse, W, Warkentin, E, Vorholt, J.A.
Deposit date:2002-05-22
Release date:2002-09-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of methylene-tetrahydromethanopterin dehydrogenase from methylobacterium extorquens AM1.
Structure, 10, 2002
1LUA
DownloadVisualize
BU of 1lua by Molmil
Structure of methylene-tetrahydromethanopterin dehydrogenase from Methylobacterium extorquens AM1 complexed with NADP
Descriptor: Methylene Tetrahydromethanopterin Dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Ermler, U, Hagemeier, C.H, Roth, A, Demmer, U, Grabarse, W, Warkentin, E, Vorholt, J.A.
Deposit date:2002-05-22
Release date:2002-09-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of methylene-tetrahydromethanopterin dehydrogenase from methylobacterium extorquens AM1.
Structure, 10, 2002
6TLK
DownloadVisualize
BU of 6tlk by Molmil
Structure of methylene-tetrahydromethanopterin dehydrogenase from Methylorubrum extorquens AM1 in an open conformation containing NADP+ and methylene-H4MPT
Descriptor: 5,10-DIMETHYLENE TETRAHYDROMETHANOPTERIN, Bifunctional protein MdtA, CHLORIDE ION, ...
Authors:Wagner, T, Huang, G, Demmer, U, Warkentin, E, Ermler, U, Shima, S.
Deposit date:2019-12-02
Release date:2020-02-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Hydride Transfer Process in NADP-dependent Methylene-tetrahydromethanopterin Dehydrogenase.
J.Mol.Biol., 432, 2020
6TM3
DownloadVisualize
BU of 6tm3 by Molmil
Structure of methylene-tetrahydromethanopterin dehydrogenase from Methylorubrum extorquens AM1 in a close conformation containing NADP+ and methylene-H4MPT
Descriptor: 1,2-ETHANEDIOL, 5,10-DIMETHYLENE TETRAHYDROMETHANOPTERIN, Bifunctional protein MdtA, ...
Authors:Wagner, T, Huang, G, Demmer, U, Warkentin, E, Ermler, U, Shima, S.
Deposit date:2019-12-03
Release date:2020-02-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:The Hydride Transfer Process in NADP-dependent Methylene-tetrahydromethanopterin Dehydrogenase.
J.Mol.Biol., 432, 2020
5MLD
DownloadVisualize
BU of 5mld by Molmil
Crystal Structure of RosB with bound intermediate AFP (8-demethyl-8-aminoriboflavin-5'-phosphate)
Descriptor: 8-demethyl-8-aminoriboflavin-5'-phosphate, BRAMP domain protein
Authors:Konjik, V, Bruenle, S, Demmer, U, Vanselow, A, Sandhoff, R, Mack, M, Ermler, U.
Deposit date:2016-12-06
Release date:2017-12-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The crystal structure of RosB gives insights into the reaction mechanism of this first known member of a new family of flavodoxin-like enzymes
To be published
5MJI
DownloadVisualize
BU of 5mji by Molmil
Crystal Structure of RosB with bound intermediate OHC-RP (8-demethyl-8-formylriboflavin-5'-phosphate)
Descriptor: BRAMP domain protein, [(2~{S},3~{R},4~{R})-5-[8-methanoyl-7-methyl-2,4-bis(oxidanylidene)-1~{H}-benzo[g]pteridin-10-ium-10-yl]-2,3,4-tris(oxidanyl)pentyl] dihydrogen phosphate
Authors:Konjik, V, Bruenle, S, Demmer, U, Vanselow, A, Sandhoff, R, Mack, M, Ermler, U.
Deposit date:2016-12-01
Release date:2016-12-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Crystal Structure of RosB: Insights into the Reaction Mechanism of the First Member of a Family of Flavodoxin-like Enzymes.
Angew. Chem. Int. Ed. Engl., 56, 2017
3OZV
DownloadVisualize
BU of 3ozv by Molmil
The Crystal Structure of flavohemoglobin from R. eutrophus in complex with econazole
Descriptor: 1-[(2S)-2-[(4-CHLOROBENZYL)OXY]-2-(2,4-DICHLOROPHENYL)ETHYL]-1H-IMIDAZOLE, 1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:El Hammi, E, Warkentin, E, Demmer, U, Ermler, U, Baciou, L.
Deposit date:2010-09-27
Release date:2011-03-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of Ralstonia eutropha Flavohemoglobin in Complex with Three Antibiotic Azole Compounds.
Biochemistry, 50, 2011
3OZW
DownloadVisualize
BU of 3ozw by Molmil
The Crystal Structure of flavohemoglobin from R. eutrophus in complex with ketoconazole
Descriptor: 1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL, 1-acetyl-4-(4-{[(2R,4S)-2-(2,4-dichlorophenyl)-2-(1H-imidazol-1-ylmethyl)-1,3-dioxolan-4-yl]methoxy}phenyl)piperazine, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:El Hammi, E, Warkentin, E, Demmer, U, Ermler, U, Baciou, L.
Deposit date:2010-09-27
Release date:2011-03-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of Ralstonia eutropha Flavohemoglobin in Complex with Three Antibiotic Azole Compounds.
Biochemistry, 50, 2011
3OZU
DownloadVisualize
BU of 3ozu by Molmil
The Crystal Structure of flavohemoglobin from R. eutrophus in complex with miconazole
Descriptor: 1-[(2R)-2-[(2,4-dichlorobenzyl)oxy]-2-(2,4-dichlorophenyl)ethyl]-1H-imidazole, FLAVIN-ADENINE DINUCLEOTIDE, Flavohemoprotein, ...
Authors:El Hammi, E, Warkentin, E, Demmer, U, Ermler, U, Baciou, L.
Deposit date:2010-09-27
Release date:2011-03-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of Ralstonia eutropha Flavohemoglobin in Complex with Three Antibiotic Azole Compounds.
Biochemistry, 50, 2011
4DNX
DownloadVisualize
BU of 4dnx by Molmil
The structure of the ATP sulfurylase from Allochromatium vinosum in the open state
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Sulfate adenylyltransferase
Authors:Parey, K, Demmer, U, Warkentin, E, Dahl, C, Ermler, U.
Deposit date:2012-02-09
Release date:2013-02-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural, biochemical and genetic characterization of dissimilatory ATP sulfurylase from Allochromatium vinosum.
Plos One, 8, 2013
3SQG
DownloadVisualize
BU of 3sqg by Molmil
Crystal structure of a methyl-coenzyme M reductase purified from Black Sea mats
Descriptor: (17[2]S)-17[2]-methylthio-coenzyme F43, 1-THIOETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Shima, S, Krueger, M, Weinert, T, Demmer, U, Thauer, R.K, Ermler, U.
Deposit date:2011-07-05
Release date:2011-11-30
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of a methyl-coenzyme M reductase from Black Sea mats that oxidize methane anaerobically.
Nature, 481, 2011
7YXM
DownloadVisualize
BU of 7yxm by Molmil
Benzoylsuccinyl-CoA thiolase with coenzyme A
Descriptor: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Benzoylsuccinyl-CoA thiolase subunit, ...
Authors:Ermler, U, Heider, J, Weidenweber, S.
Deposit date:2022-02-16
Release date:2022-04-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Finis tolueni: a new type of thiolase with an integrated Zn-finger subunit catalyzes the final step of anaerobic toluene metabolism.
Febs J., 289, 2022
4N7B
DownloadVisualize
BU of 4n7b by Molmil
Structure of the E-1-hydroxy-2-methyl-but-2-enyl-4-diphosphate reductase from Plasmodium falciparum
Descriptor: FE3-S4 CLUSTER, GLYCEROL, LytB, ...
Authors:Rekittke, I, Jomaa, H, Ermler, U.
Deposit date:2013-10-15
Release date:2013-11-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.198 Å)
Cite:Structure of the (E)-4-hydroxy-3-methyl-but-2-enyl-diphosphate reductase from Plasmodium falciparum.
Febs Lett., 587, 2013
5L9W
DownloadVisualize
BU of 5l9w by Molmil
Crystal structure of the Apc core complex
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, Acetophenone carboxylase alpha subunit, ...
Authors:Warkentin, E, Weidenweber, S, Ermler, U.
Deposit date:2016-06-11
Release date:2017-01-18
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the acetophenone carboxylase core complex: prototype of a new class of ATP-dependent carboxylases/hydrolases.
Sci Rep, 7, 2017
8BGR
DownloadVisualize
BU of 8bgr by Molmil
FAD-independent Methylene-Tetrahydrofolate Reductase from Mycobacterium hassiacum
Descriptor: Methylenetetrahydrofolate reductase
Authors:Gehl, M, Ermler, U, Shima, S.
Deposit date:2022-10-28
Release date:2023-05-10
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of FAD-independent methylene-tetrahydrofolate reductase from Mycobacterium hassiacum.
Proteins, 91, 2023
2OGX
DownloadVisualize
BU of 2ogx by Molmil
The crystal structure of the molybdenum storage protein from Azotobacter vinelandii loaded with polyoxotungstates (WSto)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Molybdenum storage protein subunit alpha, ...
Authors:Schemberg, J, Warkentin, E, Ermler, U.
Deposit date:2007-01-09
Release date:2007-04-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Towards Biological Supramolecular Chemistry: A Variety of Pocket-Templated, Individual Metal Oxide Cluster Nucleations in the Cavity of a Mo/W-Storage Protein.
Angew.Chem.Int.Ed.Engl., 46, 2007
3DNF
DownloadVisualize
BU of 3dnf by Molmil
Structure of (E)-4-Hydroxy-3-methyl-but-2-enyl Diphosphate Reductase, the Terminal Enzyme of the Non-Mevalonate Pathway
Descriptor: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, FE3-S4 CLUSTER, GLYCEROL
Authors:Rekittke, I.
Deposit date:2008-07-02
Release date:2008-12-30
Last modified:2020-09-09
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure of (E)-4-Hydroxy-3-methyl-but-2-enyl Diphosphate Reductase, the Terminal Enzyme of the Non-Mevalonate Pathway.
J.Am.Chem.Soc., 2008
6QKX
DownloadVisualize
BU of 6qkx by Molmil
2-Naphthoyl-CoA Reductase-DiHydroNaphthoyl-CoA complex(NCR-DHNCoA co-crystallized complex)
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, IRON/SULFUR CLUSTER, ...
Authors:Kayastha, K, Ermler, U.
Deposit date:2019-01-30
Release date:2019-05-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Low potential enzymatic hydride transfer via highly cooperative and inversely functionalized flavin cofactors.
Nat Commun, 10, 2019

221051

数据于2024-06-12公开中

PDB statisticsPDBj update infoContact PDBjnumon