Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4CWF
DownloadVisualize
BU of 4cwf by Molmil
Human HSP90 alpha N-terminal domain in complex with an Aminotriazoloquinazoline inhibitor
Descriptor: 5-propyl[1,2,4]triazolo[1,5-c]quinazolin-2-amine, HEAT SHOCK PROTEIN HSP 90-ALPHA
Authors:Casale, E, Amboldi, N, Brasca, G, Caronni, D, Colombo, N, Dalvit, C, Felder, E.R, Fogliatto, G, Isacchi, A, Mantegani, S, Polucci, P, Riceputi, L, Sola, F, Visco, C, Zuccotto, F, Casuscelli, F.
Deposit date:2014-04-02
Release date:2014-07-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Fragment-Based Hit Discovery and Structure-Based Optimization of Aminotriazoloquinazolines as Novel Hsp90 Inhibitors.
Bioorg.Med.Chem., 22, 2014
4CWT
DownloadVisualize
BU of 4cwt by Molmil
Human HSP90 alpha N-terminal domain in complex with an Aminotriazoloquinazoline inhibitor
Descriptor: 2-{[(2Z)-5-(1,3-benzodioxol-5-ylmethyl)-8-fluoro-2-imino-2,3-dihydro[1,2,4]triazolo[1,5-c]quinazolin-10-yl]amino}ethanol, HEAT SHOCK PROTEIN HSP 90-ALPHA
Authors:Casale, E, Amboldi, N, Brasca, G, Caronni, D, Colombo, N, Dalvit, C, Felder, E.R, Fogliatto, G, Isacchi, A, Mantegani, S, Polucci, P, Riceputi, L, Sola, F, Visco, C, Zuccotto, F, Casuscelli, F.
Deposit date:2014-04-03
Release date:2014-07-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Fragment-Based Hit Discovery and Structure-Based Optimization of Aminotriazoloquinazolines as Novel Hsp90 Inhibitors.
Bioorg.Med.Chem., 22, 2014
4CWQ
DownloadVisualize
BU of 4cwq by Molmil
Human HSP90 alpha N-terminal domain in complex with an Aminotriazoloquinazoline inhibitor
Descriptor: 2-amino-5-(1,3-benzodioxol-5-ylmethyl)[1,2,4]triazolo[1,5-c]quinazoline-8-sulfonamide, HEAT SHOCK PROTEIN HSP 90-ALPHA
Authors:Casale, E, Amboldi, N, Brasca, G, Caronni, D, Colombo, N, Dalvit, C, Felder, E.R, Fogliatto, G, Isacchi, A, Mantegani, S, Polucci, P, Riceputi, L, Sola, F, Visco, C, Zuccotto, F, Casuscelli, F.
Deposit date:2014-04-03
Release date:2014-07-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Fragment-Based Hit Discovery and Structure-Based Optimization of Aminotriazoloquinazolines as Novel Hsp90 Inhibitors.
Bioorg.Med.Chem., 22, 2014
4CMH
DownloadVisualize
BU of 4cmh by Molmil
Crystal structure of CD38 with a novel CD38-targeting antibody SAR650984
Descriptor: ADP-RIBOSYL CYCLASE 1, HEAVY CHAIN OF SAR650984-FAB FRAGMENT, LIGHT CHAIN OF SAR650984-FAB FRAGMENT
Authors:Deckert, J, Wetzel, M.C, Park, P.U, Bartle, L.M, Skaletskaya, A, Goldmacher, V, Vallee, F, ZhouLiu, Q, Ferrari, P, Pouzieux, S, Lahoute, C, Dumontet, C, Plesa, A, Chiron, M, Lejeune, P, Chittenden, T, Blanc, V.
Deposit date:2014-01-15
Release date:2014-07-16
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:SAR650984, a novel humanized CD38-targeting antibody, demonstrates potent antitumor activity in models of multiple myeloma and other CD38+ hematologic malignancies.
Clin. Cancer Res., 20, 2014
4DCX
DownloadVisualize
BU of 4dcx by Molmil
X-ray structure of NikA in complex with Fe(1R,2R)-N,N'-Bis(2-pyridylmethyl)-N,N'-dicarboxymethyl-1,2-cyclohexanediamine
Descriptor: ACETATE ION, GLYCEROL, Nickel-binding periplasmic protein, ...
Authors:Cherrier, M.V, Girgenti, E, Amara, P, Iannello, M, Marchi-Delapierre, C, Fontecilla-Camps, J.C, Menage, S, Cavazza, C.
Deposit date:2012-01-18
Release date:2012-05-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structure of the periplasmic nickel-binding protein NikA provides insights for artificial metalloenzyme design.
J.Biol.Inorg.Chem., 17, 2012
6ME2
DownloadVisualize
BU of 6me2 by Molmil
XFEL crystal structure of human melatonin receptor MT1 in complex with ramelteon
Descriptor: DI(HYDROXYETHYL)ETHER, N-{2-[(8S)-1,6,7,8-tetrahydro-2H-indeno[5,4-b]furan-8-yl]ethyl}propanamide, OLEIC ACID, ...
Authors:Stauch, B, Johansson, L.C, McCorvy, J.D, Patel, N, Han, G.W, Gati, C, Batyuk, A, Ishchenko, A, Brehm, W, White, T.A, Michaelian, N, Madsen, C, Zhu, L, Grant, T.D, Grandner, J.M, Olsen, R.H.J, Tribo, A.R, Weierstall, U, Roth, B.L, Katritch, V, Liu, W, Cherezov, V.
Deposit date:2018-09-05
Release date:2019-04-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of ligand recognition at the human MT1melatonin receptor.
Nature, 569, 2019
4TWJ
DownloadVisualize
BU of 4twj by Molmil
The structure of Sir2Af2 bound to a myristoylated histone peptide
Descriptor: ACETATE ION, GLYCEROL, Histone H4 peptide, ...
Authors:Ringel, A.E, Roman, C, Wolberger, C.
Deposit date:2014-06-30
Release date:2014-12-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Alternate deacylating specificities of the archaeal sirtuins Sir2Af1 and Sir2Af2.
Protein Sci., 23, 2014
9LKX
DownloadVisualize
BU of 9lkx by Molmil
local refinement of FEM1B bound with PLD6
Descriptor: Mitochondrial cardiolipin hydrolase, Protein fem-1 homolog B
Authors:Zhao, S, Xu, C.
Deposit date:2025-01-16
Release date:2025-04-09
Last modified:2025-05-07
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:TOM20-driven E3 ligase recruitment regulates mitochondrial dynamics through PLD6.
Nat.Chem.Biol., 2025
9QPT
DownloadVisualize
BU of 9qpt by Molmil
Single particle cryo-EM structure of MdtF V610F with bound Rhodamine 6G
Descriptor: DODECANE, Multidrug resistance protein MdtF, PHOSPHATIDYLETHANOLAMINE, ...
Authors:Lawrence, R, Adams, C, Sousa, J.S, Ahdash, Z, Reading, E.
Deposit date:2025-03-28
Release date:2025-05-14
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Molecular basis for multidrug efflux by an anaerobic RND transporter.
Biorxiv, 2025
9QPS
DownloadVisualize
BU of 9qps by Molmil
Single particle cryo-EM structure of MdtF V610F
Descriptor: DODECANE, Multidrug resistance protein MdtF, PHOSPHATIDYLETHANOLAMINE
Authors:Lawrence, R, Adams, C, Sousa, J.S, Ahdash, Z, Reading, E.
Deposit date:2025-03-28
Release date:2025-05-14
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:Molecular basis for multidrug efflux by an anaerobic RND transporter.
Biorxiv, 2025
3CLZ
DownloadVisualize
BU of 3clz by Molmil
The set and ring associated (SRA) domain of UHRF1 bound to methylated DNA
Descriptor: 5'-D(*DCP*DCP*DCP*DTP*DGP*DCP*DGP*DGP*DGP*DCP*DCP*DC)-3', 5'-D(*DGP*DGP*DGP*DCP*DCP*(5CM)P*DGP*DCP*DAP*DGP*DGP*DG)-3', E3 ubiquitin-protein ligase UHRF1
Authors:Walker, J.R, Avvakumov, G.V, Xue, S, Dong, A, Li, Y, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2008-03-20
Release date:2008-04-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for recognition of hemi-methylated DNA by the SRA domain of human UHRF1.
Nature, 455, 2008
9LKY
DownloadVisualize
BU of 9lky by Molmil
Dimer of CRL2-FEM1B bound with PLD6
Descriptor: Cullin-2, E3 ubiquitin-protein ligase RBX1, N-terminally processed, ...
Authors:Zhao, S, Xu, C.
Deposit date:2025-01-17
Release date:2025-04-09
Last modified:2025-05-07
Method:ELECTRON MICROSCOPY (3.93 Å)
Cite:TOM20-driven E3 ligase recruitment regulates mitochondrial dynamics through PLD6.
Nat.Chem.Biol., 2025
8R00
DownloadVisualize
BU of 8r00 by Molmil
Crystal structure of the human PXR ligand-binding domain in complex with furanodienone
Descriptor: Nuclear receptor subfamily 1 group I member 2, furanodienone
Authors:Bourguet, W, Carivenc, C, Sirounian, S.
Deposit date:2023-10-30
Release date:2025-04-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:An abundant ginger compound furanodienone alleviates gut inflammation via the xenobiotic nuclear receptor PXR in mice.
Nat Commun, 16, 2025
6Y21
DownloadVisualize
BU of 6y21 by Molmil
Crystal structure of delta466-491 cystathionine beta-synthase from Toxoplasma gondii with L-Cystathionine
Descriptor: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID, Cystathionine beta-synthase
Authors:Fernandez-Rodriguez, C, Oyenarte, I, Conter, C, Gonzalez-Recio, I, Quintana, I, Martinez-Chantar, M, Astegno, A, Martinez-Cruz, L.A.
Deposit date:2020-02-14
Release date:2021-02-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Cystathionine Beta-synthase from Toxoplasma gondii with PLP-Cystathionine
To Be Published
6YBA
DownloadVisualize
BU of 6yba by Molmil
HAdV-F41 Capsid
Descriptor: Hexon protein, Hexon-interlacing protein, Penton protein, ...
Authors:Perez Illana, M, Martinez, M, Mangroo, C, Brown, M, Marabini, R, San Martin, C.
Deposit date:2020-03-16
Release date:2021-03-10
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Cryo-EM structure of enteric adenovirus HAdV-F41 highlights structural variations among human adenoviruses.
Sci Adv, 7, 2021
3CZF
DownloadVisualize
BU of 3czf by Molmil
Crystal structure of HLA-B*2709 complexed with the glucagon receptor (GR) peptide (residues 412-420)
Descriptor: BETA-2-MICROGLOBULIN, GLUCAGON RECEPTOR PEPTIDE, GLYCEROL, ...
Authors:Loll, B, Fiorillo, M.T, Rueckert, C, Saenger, W, Sorrentino, R, Ziegler, A, Uchanska-Ziegler, B.
Deposit date:2008-04-29
Release date:2009-04-07
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Conformational Plasticity of HLA-B27 Molecules Correlates Inversely With Efficiency of Negative T Cell Selection.
Front Immunol, 11, 2020
2IBN
DownloadVisualize
BU of 2ibn by Molmil
Crystal structure of Human myo-Inositol Oxygenase (MIOX)
Descriptor: (2S,3R,4R,5S,6S)-2,3,4,5,6-PENTAHYDROXYCYCLOHEXANONE, CYSTEINE, FE (III) ION, ...
Authors:Hallberg, B.M, Busam, R.D, Arrowsmith, C, Berglund, H, Collins, R, Edwards, A, Ehn, M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hogbom, M, Holmberg-Schiavone, L, Johansson, I, Karlberg, T, Kotenyova, T, Nilsson-Ehle, P, Nordlund, P, Nyman, T, Ogg, D, Sagemark, J, Stenmark, P, Sundstrom, M, Uppenberg, J, Van Den Berg, S, Weigelt, J, Thorsell, A.G, Persson, C, Structural Genomics Consortium (SGC)
Deposit date:2006-09-11
Release date:2006-10-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and Biophysical Characterization of Human myo-Inositol Oxygenase
J.Biol.Chem., 283, 2008
3D73
DownloadVisualize
BU of 3d73 by Molmil
Crystal structure of a pheromone binding protein mutant D35A, from Apis mellifera, at pH 7.0
Descriptor: N-BUTYL-BENZENESULFONAMIDE, Pheromone-binding protein ASP1
Authors:Pesenti, M.E, Spinelli, S, Bezirard, V, Briand, L, Pernollet, J.C, Tegoni, M, Cambillau, C.
Deposit date:2008-05-20
Release date:2009-05-26
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Queen bee pheromone binding protein pH-induced domain swapping favors pheromone release
J.Mol.Biol., 390, 2009
3CJZ
DownloadVisualize
BU of 3cjz by Molmil
Effects of N2,N2-dimethylguanosine on RNA structure and stability: crystal structure of an RNA duplex with tandem m22G:A pairs
Descriptor: RNA (5'-R(*GP*GP*AP*CP*GP*(M2G)P*AP*CP*GP*UP*CP*CP*U)-3')
Authors:Pallan, P.S, Kreutz, C, Bosio, S, Micura, R, Egli, M.
Deposit date:2008-03-14
Release date:2008-10-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Effects of N2,N2-dimethylguanosine on RNA structure and stability: crystal structure of an RNA duplex with tandem m2 2G:A pairs.
Rna, 14, 2008
9QPR
DownloadVisualize
BU of 9qpr by Molmil
Single particle cryo-EM structure of the multidrug efflux pump MdtF from Escherichia coli
Descriptor: DODECANE, Multidrug resistance protein MdtF, PHOSPHATIDYLETHANOLAMINE
Authors:Lawrence, R, Adams, C, Sousa, J.S, Ahdash, Z, Reading, E.
Deposit date:2025-03-28
Release date:2025-05-14
Method:ELECTRON MICROSCOPY (3.56 Å)
Cite:Molecular basis for multidrug efflux by an anaerobic RND transporter.
Biorxiv, 2025
6YJL
DownloadVisualize
BU of 6yjl by Molmil
Solution NMR structure of the C-terminal arm of RSV nucleoprotein
Descriptor: Nucleoprotein
Authors:Cardone, C, Eleouet, J.-F, Galloux, M, Sizun, C.
Deposit date:2020-04-03
Release date:2021-04-14
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Solution NMR structure of the C-terminal arm of RSV nucleoprotein
To Be Published
3D78
DownloadVisualize
BU of 3d78 by Molmil
Dimeric crystal structure of a pheromone binding protein mutant D35N, from apis mellifera, at pH 7.0
Descriptor: 1,2-ETHANEDIOL, N-BUTYL-BENZENESULFONAMIDE, Pheromone-binding protein ASP1
Authors:Pesenti, M.E, Spinelli, S, Bezirard, V, Briand, L, Pernollet, J.C, Tegoni, M, Cambillau, C.
Deposit date:2008-05-20
Release date:2009-05-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Queen bee pheromone binding protein pH-induced domain swapping favors pheromone release
J.Mol.Biol., 390, 2009
9L04
DownloadVisualize
BU of 9l04 by Molmil
Crystal structure of human ALK2 kinase domain with R206H mutation in complex with RK783
Descriptor: 4-(1-ethyl-3-pyridin-3-yl-pyrazol-4-yl)-~{N}-[4-[4-(oxetan-3-yl)piperazin-1-yl]phenyl]pyrimidin-2-amine, Activin receptor type-1, SULFATE ION
Authors:Sakai, N, Mishima-Tsumagari, C, Shirouzu, M.
Deposit date:2024-12-11
Release date:2025-06-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:A new BMP type 1 receptor kinase inhibitor for safe and efficient oral treatment to prevent genetically induced heterotopic ossification in mice.
Bone, 2025
6Y95
DownloadVisualize
BU of 6y95 by Molmil
Ca2+-free Calmodulin mutant N53I
Descriptor: Calmodulin
Authors:Holt, C, Hamborg, L.N, Lau, K, Brohus, M, Sorensen, A.B, Larsen, K.T, Sommer, C, Petegem, F.V, Overgaard, M.T, Wimmer, R.
Deposit date:2020-03-06
Release date:2020-04-29
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:The arrhythmogenic N53I variant subtly changes the structure and dynamics in the calmodulin N-terminal domain, altering its interaction with the cardiac ryanodine receptor.
J.Biol.Chem., 295, 2020
6YP5
DownloadVisualize
BU of 6yp5 by Molmil
Solution NMR structure of the oligomerization domain of respiratory syncytial virus phosphoprotein
Descriptor: Phosphoprotein
Authors:Cardone, C, Bontems, F, Bardiaux, B, Sizun, C.
Deposit date:2020-04-15
Release date:2021-04-28
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:A Structural and Dynamic Analysis of the Partially Disordered Polymerase-Binding Domain in RSV Phosphoprotein.
Biomolecules, 11, 2021

238582

数据于2025-07-09公开中

PDB statisticsPDBj update infoContact PDBjnumon