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3NZ3
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BU of 3nz3 by Molmil
Crystal structure of the mucin-binding domain of Spr1345 from Streptococcus pneumoniae
Descriptor: Putative uncharacterized protein, SULFATE ION, TRIETHYLENE GLYCOL
Authors:Du, Y, He, Y.-X, Zhang, Z.-Y, Yang, Y.-H, Shi, W.-W, Frolet, C, Guilmi, A.M, Vernet, T, Zhou, C.-Z, Chen, Y.
Deposit date:2010-07-15
Release date:2011-04-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the mucin-binding domain of Spr1345 from Streptococcus pneumoniae
J.Struct.Biol., 174, 2011
3PPR
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BU of 3ppr by Molmil
Structures of the substrate-binding protein provide insights into the multiple compatible solutes binding specificities of Bacillus subtilis ABC transporter OpuC
Descriptor: (4S)-2-METHYL-1,4,5,6-TETRAHYDROPYRIMIDINE-4-CARBOXYLIC ACID, Glycine betaine/carnitine/choline-binding protein
Authors:Du, Y, Shi, W.W, He, Y.X, Yang, Y.H, Zhou, C.Z, Chen, Y.
Deposit date:2010-11-25
Release date:2011-05-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of the substrate-binding protein provide insights into the multiple compatible solute binding specificities of the Bacillus subtilis ABC transporter OpuC
Biochem.J., 436, 2011
3PPO
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BU of 3ppo by Molmil
Structures of the substrate-binding protein provide insights into the multiple compatible solutes binding specificities of Bacillus subtilis ABC transporter OpuC
Descriptor: (2S)-3-carboxy-2-hydroxy-N,N,N-trimethylpropan-1-aminium, Glycine betaine/carnitine/choline-binding protein
Authors:Du, Y, Shi, W.W, He, Y.X, Yang, Y.H, Zhou, C.Z, Chen, Y.
Deposit date:2010-11-24
Release date:2011-05-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structures of the substrate-binding protein provide insights into the multiple compatible solute binding specificities of the Bacillus subtilis ABC transporter OpuC
Biochem.J., 436, 2011
3PPP
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BU of 3ppp by Molmil
Structures of the substrate-binding protein provide insights into the multiple compatible solutes binding specificities of Bacillus subtilis ABC transporter OpuC
Descriptor: Glycine betaine/carnitine/choline-binding protein, TRIMETHYL GLYCINE
Authors:Du, Y, Shi, W.W, He, Y.X, Yang, Y.H, Zhou, C.Z, Chen, Y.
Deposit date:2010-11-25
Release date:2011-05-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of the substrate-binding protein provide insights into the multiple compatible solute binding specificities of the Bacillus subtilis ABC transporter OpuC
Biochem.J., 436, 2011
3PPQ
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BU of 3ppq by Molmil
Structures of the substrate-binding protein provide insights into the multiple compatible solutes binding specificities of Bacillus subtilis ABC transporter OpuC
Descriptor: CHOLINE ION, Glycine betaine/carnitine/choline-binding protein
Authors:Du, Y, Shi, W.W, He, Y.X, Yang, Y.H, Zhou, C.Z, Chen, Y.
Deposit date:2010-11-25
Release date:2011-05-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structures of the substrate-binding protein provide insights into the multiple compatible solute binding specificities of the Bacillus subtilis ABC transporter OpuC
Biochem.J., 436, 2011
3PPN
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BU of 3ppn by Molmil
Structures of the substrate-binding protein provide insights into the multiple compatible solutes binding specificities of Bacillus subtilis ABC transporter OpuC
Descriptor: Glycine betaine/carnitine/choline-binding protein
Authors:Du, Y, Shi, W.W, He, Y.X, Yang, Y.H, Zhou, C.Z, Chen, Y.
Deposit date:2010-11-24
Release date:2011-05-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of the substrate-binding protein provide insights into the multiple compatible solute binding specificities of the Bacillus subtilis ABC transporter OpuC
Biochem.J., 436, 2011
6LQS
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BU of 6lqs by Molmil
Cryo-EM structure of 90S small subunit preribosomes in transition states (State D)
Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S pre-rRNA, 40S ribosomal protein S1-A, ...
Authors:Du, Y, Ye, K.
Deposit date:2020-01-14
Release date:2020-09-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM structure of 90 S small ribosomal subunit precursors in transition states.
Science, 369, 2020
6LQR
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BU of 6lqr by Molmil
Cryo-EM structure of 90S small subunit preribosomes in transition states (State C)
Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S pre-rRNA, 40S ribosomal protein S1-A, ...
Authors:Du, Y, Ye, K.
Deposit date:2020-01-14
Release date:2020-09-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (8.6 Å)
Cite:Cryo-EM structure of 90 S small ribosomal subunit precursors in transition states.
Science, 369, 2020
6LQV
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BU of 6lqv by Molmil
Cryo-EM structure of 90S small subunit preribosomes in transition states (State C1)
Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S pre-rRNA, 40S ribosomal protein S11-A, ...
Authors:Du, Y, Ye, K.
Deposit date:2020-01-14
Release date:2020-09-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Cryo-EM structure of 90 S small ribosomal subunit precursors in transition states.
Science, 369, 2020
6LQT
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BU of 6lqt by Molmil
Cryo-EM structure of 90S small subunit preribosomes in transition states (State E)
Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S pre-rRNA, 40S ribosomal protein S1-A, ...
Authors:Du, Y, Ye, K.
Deposit date:2020-01-14
Release date:2020-09-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Cryo-EM structure of 90 S small ribosomal subunit precursors in transition states.
Science, 369, 2020
6LQQ
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BU of 6lqq by Molmil
Cryo-EM structure of 90S small subunit preribosomes in transition states (State B)
Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S pre-rRNA, 40S ribosomal protein S1-A, ...
Authors:Du, Y, Ye, K.
Deposit date:2020-01-14
Release date:2020-09-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM structure of 90 S small ribosomal subunit precursors in transition states.
Science, 369, 2020
6LQP
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BU of 6lqp by Molmil
Cryo-EM structure of 90S small subunit preribosomes in transition states (State A)
Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S pre-rRNA, 40S ribosomal protein S1-A, ...
Authors:Du, Y, Ye, K.
Deposit date:2020-01-14
Release date:2020-09-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of 90 S small ribosomal subunit precursors in transition states.
Science, 369, 2020
6LQU
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BU of 6lqu by Molmil
Cryo-EM structure of 90S small subunit preribosomes in transition states (State A1)
Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S pre-rRNA, 40S ribosomal protein S11-A, ...
Authors:Du, Y, Ye, K.
Deposit date:2020-01-14
Release date:2020-09-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structure of 90 S small ribosomal subunit precursors in transition states.
Science, 369, 2020
8WKC
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BU of 8wkc by Molmil
Crystal structure of OgBVMO(Oceanicola granulosus)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Du, Y, Wang, Y.H.
Deposit date:2023-09-27
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of OgBVMO(Oceanicola granulosus)
To be published
6KE6
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BU of 6ke6 by Molmil
3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosome
Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ...
Authors:Du, Y, Ye, K, An, W.
Deposit date:2019-07-03
Release date:2020-08-05
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosome
To be published
3LZZ
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BU of 3lzz by Molmil
Crystal structures of Cupin superfamily BbDUF985 from Branchiostoma belcheri tsingtauense in apo and GDP-bound forms
Descriptor: ACETATE ION, GUANOSINE-5'-DIPHOSPHATE, Putative uncharacterized protein
Authors:Du, Y, He, Y.-X, Saren, G, Zhang, X, Zhang, S.-C, Chen, Y, Zhou, C.-Z.
Deposit date:2010-03-02
Release date:2010-06-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of the apo and GDP-bound forms of a cupin-like protein BbDUF985 from Branchiostoma belcheri tsingtauense
Proteins, 2010
5YZ4
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BU of 5yz4 by Molmil
Structure of the PIN domain endonuclease Utp24
Descriptor: CALCIUM ION, ZINC ION, rRNA-processing protein fcf1
Authors:Du, Y, An, W, Ye, K.
Deposit date:2017-12-12
Release date:2018-12-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.135 Å)
Cite:Structural and functional analysis of Utp24, an endonuclease for processing 18S ribosomal RNA.
Plos One, 13, 2018
6E67
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BU of 6e67 by Molmil
Structure of beta2 adrenergic receptor fused to a Gs peptide
Descriptor: 8-[(1R)-2-{[1,1-dimethyl-2-(2-methylphenyl)ethyl]amino}-1-hydroxyethyl]-5-hydroxy-2H-1,4-benzoxazin-3(4H)-one, Beta-2 adrenergic receptor,Endolysin,Guanine nucleotide-binding protein G(s) subunit alpha isoforms short,Beta-2 adrenergic receptor chimera
Authors:Liu, X, Xu, X, Hilger, D, Tiemann, J, Liu, H, Du, Y, Hirata, K, Sun, X, Guixa-Gonzalez, R, Mathiesen, J, Hildebrand, P, Kobilka, B.
Deposit date:2018-07-24
Release date:2019-06-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structural Insights into the Process of GPCR-G Protein Complex Formation.
Cell, 177, 2019
7T90
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BU of 7t90 by Molmil
Cryo-EM structure of ACh-bound M2R-Go signaling complex in S2 state
Descriptor: ACETYLCHOLINE, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Xu, J, Wang, Q, Du, Y, Kobilka, B.K.
Deposit date:2021-12-17
Release date:2023-01-25
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Structural and dynamic insights into supra-physiological activation and allosteric modulation of a muscarinic acetylcholine receptor.
Nat Commun, 14, 2023
7T8X
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BU of 7t8x by Molmil
Cryo-EM structure of ACh-bound M2R-Go signaling complex in S1 state
Descriptor: ACETYLCHOLINE, Antibody fragment, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Xu, J, Wang, Q, Du, Y, Kobilka, B.K.
Deposit date:2021-12-17
Release date:2023-01-25
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Structural and dynamic insights into supra-physiological activation and allosteric modulation of a muscarinic acetylcholine receptor.
Nat Commun, 14, 2023
7T96
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BU of 7t96 by Molmil
Cryo-EM structure of S2 state ACh-bound M2R-Go signaling complex with a PAM
Descriptor: 3-amino-5-chloro-N-cyclopropyl-4-methyl-6-[2-(4-methylpiperazin-1-yl)-2-oxoethoxy]thieno[2,3-b]pyridine-2-carboxamide, ACETYLCHOLINE, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Xu, J, Wang, Q, Du, Y, Kobilka, B.K.
Deposit date:2021-12-18
Release date:2023-01-25
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Structural and dynamic insights into supra-physiological activation and allosteric modulation of a muscarinic acetylcholine receptor.
Nat Commun, 14, 2023
7T94
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BU of 7t94 by Molmil
Cryo-EM structure of S1 state ACh-bound M2R-Go signaling complex with a PAM
Descriptor: 3-amino-5-chloro-N-cyclopropyl-4-methyl-6-[2-(4-methylpiperazin-1-yl)-2-oxoethoxy]thieno[2,3-b]pyridine-2-carboxamide, ACETYLCHOLINE, Antibody fragment, ...
Authors:Xu, J, Wang, Q, Du, Y, Kobilka, B.K.
Deposit date:2021-12-17
Release date:2023-01-25
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Structural and dynamic insights into supra-physiological activation and allosteric modulation of a muscarinic acetylcholine receptor.
Nat Commun, 14, 2023
3LOI
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BU of 3loi by Molmil
Crystal structures of Cupin superfamily BbDUF985 from Branchiostoma belcheri tsingtauense in the apo and GDP-bound forms
Descriptor: Putative uncharacterized protein
Authors:Zou, C.Z, Du, Y, He, Y.-X, Saren, G, Zhang, X, Chen, Y, Zhang, S.-C.
Deposit date:2010-02-04
Release date:2010-06-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of the apo and GDP-bound forms of a cupin-like protein BbDUF985 from Branchiostoma belcheri tsingtauense
Proteins, 2010
8XGO
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BU of 8xgo by Molmil
a peptide receptor complex structure
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(q) subunit alpha, ...
Authors:Wu, Z, Du, Y, Chen, G.
Deposit date:2023-12-15
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:Structural basis for the ligand recognition and G protein subtype selectivity of kisspeptin receptor.
Sci Adv, 10, 2024
8XGU
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BU of 8xgu by Molmil
a peptide receptor complex structure
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Wu, Z, Du, Y, Chen, G.
Deposit date:2023-12-15
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis for the ligand recognition and G protein subtype selectivity of kisspeptin receptor.
Sci Adv, 10, 2024

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