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2K3J
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BU of 2k3j by Molmil
The solution structure of human Mia40
Descriptor: Mitochondrial intermembrane space import and assembly protein 40
Authors:Ciofi Baffoni, S, Bertini, I, Gallo, A.
Deposit date:2008-05-08
Release date:2009-02-10
Last modified:2024-11-20
Method:SOLUTION NMR
Cite:MIA40 is an oxidoreductase that catalyzes oxidative protein folding in mitochondria.
Nat.Struct.Mol.Biol., 16, 2009
2LQT
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BU of 2lqt by Molmil
Solution structure of CHCHD7
Descriptor: Coiled-coil-helix-coiled-coil-helix domain-containing protein 7
Authors:Winkelmann, J, Ciofi-Baffoni, S, Banci, L, Bertini, I.
Deposit date:2012-03-14
Release date:2012-10-24
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Structural characterization of CHCHD5 and CHCHD7: Two atypical human twin CX(9)C proteins.
J.Struct.Biol., 180, 2012
2LLH
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BU of 2llh by Molmil
NMR structure of Npm1_c70
Descriptor: Nucleophosmin
Authors:Banci, L, Bertini, I, Brunori, M, Di Matteo, A, Federici, L, Gallo, A, Lo Sterzo, C, Mori, M.
Deposit date:2011-11-09
Release date:2012-06-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of Nucleophosmin DNA-binding Domain and Analysis of Its Complex with a G-quadruplex Sequence from the c-MYC Promoter.
J.Biol.Chem., 287, 2012
2KMV
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BU of 2kmv by Molmil
Solution structure of the nucleotide binding domain of the human Menkes protein in the ATP-free form
Descriptor: Copper-transporting ATPase 1
Authors:Banci, L, Bertini, I, Cantini, F, Inagaki, S, Migliardi, M, Rosato, A.
Deposit date:2009-08-05
Release date:2009-12-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The binding mode of ATP revealed by the solution structure of the N-domain of human ATP7A.
J.Biol.Chem., 2009
2KIJ
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BU of 2kij by Molmil
Solution structure of the Actuator domain of the copper-transporting ATPase ATP7A
Descriptor: Copper-transporting ATPase 1
Authors:Banci, L, Bertini, I, Cantini, F, Migliardi, M, Nushi, F, Natile, G, Rosato, A.
Deposit date:2009-05-06
Release date:2009-08-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structures of the actuator domain of ATP7A and ATP7B, the Menkes and Wilson disease proteins
Biochemistry, 48, 2009
2LD4
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BU of 2ld4 by Molmil
Solution structure of the N-terminal domain of human anamorsin
Descriptor: Anamorsin
Authors:Banci, L, Bertini, I, Ciofi-Baffoni, S, Boscaro, F, Chatzi, A, Mikolajczyk, M, Tokatlidis, K, Winkelmann, J.
Deposit date:2011-05-13
Release date:2011-07-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Anamorsin Is a [2Fe-2S] Cluster-Containing Substrate of the Mia40-Dependent Mitochondrial Protein Trapping Machinery.
Chem.Biol., 18, 2011
2L51
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BU of 2l51 by Molmil
Solution structure of calcium bound S100A16
Descriptor: CALCIUM ION, Protein S100-A16
Authors:Babini, E, Bertini, I, Borsi, V, Calderone, V, Hu, X, Luchinat, C, Parigi, G.
Deposit date:2010-10-22
Release date:2010-11-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural characterization of human S100A16, a low-affinity calcium binder.
J.Biol.Inorg.Chem., 16, 2011
2LQL
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BU of 2lql by Molmil
Solution structure of CHCH5
Descriptor: Coiled-coil-helix-coiled-coil-helix domain-containing protein 5
Authors:Peruzzini, R, Ciofi-Baffoni, S, Banci, L, Bertini, I.
Deposit date:2012-03-09
Release date:2012-10-24
Last modified:2024-11-20
Method:SOLUTION NMR
Cite:Structural characterization of CHCHD5 and CHCHD7: Two atypical human twin CX(9)C proteins.
J.Struct.Biol., 180, 2012
3F1A
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BU of 3f1a by Molmil
Crystal structure of the catalytic domain of human MMP12 complexed with the inhibitor N-(2-nitroso-2-oxoethyl)benzenesulfonamide
Descriptor: CALCIUM ION, Macrophage metalloelastase, N-oxo-2-(phenylsulfonylamino)ethanamide, ...
Authors:Calderone, V.
Deposit date:2008-10-27
Release date:2008-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Exploring the subtleties of drug-receptor interactions: the case of matrix metalloproteinases.
J.Am.Chem.Soc., 129, 2007
3F19
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BU of 3f19 by Molmil
Crystal structure of the catalytic domain of human MMP12 complexed with the inhibitor 4-fluoro-N-(2-nitroso-2-oxoethyl)benzenesulfonamide
Descriptor: 2-[(4-fluorophenyl)sulfonylamino]-N-oxo-ethanamide, CALCIUM ION, Macrophage metalloelastase, ...
Authors:Calderone, V.
Deposit date:2008-10-27
Release date:2008-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Exploring the subtleties of drug-receptor interactions: the case of matrix metalloproteinases.
J.Am.Chem.Soc., 129, 2007
3F16
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BU of 3f16 by Molmil
Crystal structure of the catalytic domain of human MMP12 complexed with the inhibitor (R)-N-(3-hydroxy-1-nitroso-1-oxopropan-2-yl)-4-methoxybenzenesulfonamide
Descriptor: (2R)-3-hydroxy-2-[(4-methoxyphenyl)sulfonylamino]-N-oxo-propanamide, CALCIUM ION, Macrophage metalloelastase, ...
Authors:Calderone, V.
Deposit date:2008-10-27
Release date:2008-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Exploring the subtleties of drug-receptor interactions: the case of matrix metalloproteinases.
J.Am.Chem.Soc., 129, 2007
3F17
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BU of 3f17 by Molmil
Crystal structure of the catalytic domain of human MMP12 complexed with the inhibitor N-(2-nitroso-2-oxoethyl)biphenyl-4-sulfonamide
Descriptor: CALCIUM ION, Macrophage metalloelastase, N-oxidanyl-2-[(4-phenylphenyl)sulfonylamino]ethanamide, ...
Authors:Calderone, V.
Deposit date:2008-10-27
Release date:2008-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Exploring the subtleties of drug-receptor interactions: the case of matrix metalloproteinases.
J.Am.Chem.Soc., 129, 2007
3F15
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BU of 3f15 by Molmil
Crystal structure of the catalytic domain of human mmp12 complexed with the inhibitor (S)-N-(2,3-dihydroxypropyl)-4-methoxy-N-(2-nitroso-2-oxoethyl)benzenesulfonamide
Descriptor: 2-[[(2S)-2,3-dihydroxypropyl]-(4-methoxyphenyl)sulfonyl-amino]-N-oxo-ethanamide, CALCIUM ION, Macrophage metalloelastase, ...
Authors:Calderone, V.
Deposit date:2008-10-27
Release date:2008-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Exploring the subtleties of drug-receptor interactions: the case of matrix metalloproteinases.
J.Am.Chem.Soc., 129, 2007
3F18
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BU of 3f18 by Molmil
Crystal structure of the catalytic domain of human MMP12 complexed with the inhibitor 4-fluoro-N-(2-hydroxyethyl)-N-(2-nitroso-2-oxoethyl)benzenesulfonamide
Descriptor: 2-[(4-fluorophenyl)sulfonyl-(2-hydroxyethyl)amino]-N-oxo-ethanamide, CALCIUM ION, Macrophage metalloelastase, ...
Authors:Calderone, V.
Deposit date:2008-10-27
Release date:2008-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Exploring the subtleties of drug-receptor interactions: the case of matrix metalloproteinases.
J.Am.Chem.Soc., 129, 2007
3LK8
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BU of 3lk8 by Molmil
Crystal structure of the catalytic domain of human MMP12 complexed with the inhibitor paramethoxy-sulfonyl-glycine hydroxamate
Descriptor: CALCIUM ION, Macrophage metalloelastase, N-hydroxy-N~2~-[(4-methoxyphenyl)sulfonyl]glycinamide, ...
Authors:Calderone, V.
Deposit date:2010-01-27
Release date:2010-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Exploring the subtleties of drug-receptor interactions: the case of matrix metalloproteinases
J.Am.Chem.Soc., 129, 2007
3ECW
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BU of 3ecw by Molmil
Crystal structure of the ALS-related pathological mutant T54R of human apo Cu,Zn Superoxide Dismutase (SOD1)
Descriptor: Superoxide dismutase [Cu-Zn]
Authors:Calderone, V.
Deposit date:2008-09-02
Release date:2009-05-19
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and dynamic aspects related to oligomerization of apo SOD1 and its mutants.
Proc.Natl.Acad.Sci.USA, 106, 2009
3ECV
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BU of 3ecv by Molmil
Crystal structure of the ALS-related pathological mutant I113T of human apo Cu,Zn Superoxide Dismutase (SOD1)
Descriptor: Superoxide dismutase [Cu-Zn]
Authors:Calderone, V.
Deposit date:2008-09-02
Release date:2009-05-19
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and dynamic aspects related to oligomerization of apo SOD1 and its mutants.
Proc.Natl.Acad.Sci.USA, 106, 2009
3ECU
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BU of 3ecu by Molmil
Crystal structure of human apo Cu,Zn Superoxide Dismutase (SOD1)
Descriptor: Superoxide dismutase [Cu-Zn]
Authors:Calderone, V.
Deposit date:2008-09-02
Release date:2009-05-19
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and dynamic aspects related to oligomerization of apo SOD1 and its mutants.
Proc.Natl.Acad.Sci.USA, 106, 2009
4IJO
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BU of 4ijo by Molmil
Unraveling hidden allosteric regulatory sites in structurally homologues metalloproteases
Descriptor: CALCIUM ION, Macrophage metalloelastase, ZINC ION
Authors:Udi, Y, Fragai, M, Grossman, M, Mitternacht, S, Arad-Yellin, R, Calderone, V, Melikian, M, Toccafondi, M, Berezovsky, I.N, Luchinat, C, Sagi, I.
Deposit date:2012-12-22
Release date:2013-05-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Unraveling hidden regulatory sites in structurally homologous metalloproteases
J.Mol.Biol., 425, 2013
3NXA
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BU of 3nxa by Molmil
X-ray structure of the apo form of human S100A16
Descriptor: Protein S100-A16
Authors:Calderone, V.
Deposit date:2010-07-13
Release date:2010-11-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural characterization of human S100A16, a low-affinity calcium binder.
J.Biol.Inorg.Chem., 16, 2011
5LAB
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BU of 5lab by Molmil
Crystal structure of the catalytic domain of human MMP12 complexed with the inhibitor NNGH
Descriptor: CALCIUM ION, Macrophage metalloelastase, N-ISOBUTYL-N-[4-METHOXYPHENYLSULFONYL]GLYCYL HYDROXAMIC ACID, ...
Authors:Ravera, E, Calderone, V, Luchinat, C.
Deposit date:2016-06-14
Release date:2016-08-10
Last modified:2025-01-29
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:First-principles calculation of pseudo-contact shifts in a paramagnetic metalloprotein
To Be Published
1Y3K
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BU of 1y3k by Molmil
Solution structure of the apo form of the fifth domain of Menkes protein
Descriptor: Copper-transporting ATPase 1
Authors:Banci, L, Chasapis, C.T, Ciofi-Baffoni, S, Hadjiliadis, N, Rosato, A, Structural Proteomics in Europe (SPINE)
Deposit date:2004-11-25
Release date:2005-03-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:An NMR study of the interaction between the human copper(I) chaperone and the second and fifth metal-binding domains of the Menkes protein
Febs J., 272, 2005
1Y3J
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BU of 1y3j by Molmil
Solution structure of the copper(I) form of the fifth domain of Menkes protein
Descriptor: COPPER (II) ION, Copper-transporting ATPase 1
Authors:Banci, L, Chasapis, C.T, Ciofi-Baffoni, S, Hadjiliadis, N, Rosato, A, Structural Proteomics in Europe (SPINE)
Deposit date:2004-11-25
Release date:2005-03-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:An NMR study of the interaction between the human copper(I) chaperone and the second and fifth metal-binding domains of the Menkes protein
Febs J., 272, 2005
4GUY
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BU of 4guy by Molmil
Human MMP12 catalytic domain in complex with*N*-Hydroxy-2-(2-(4-methoxyphenyl)ethylsulfonamido)acetamide
Descriptor: CALCIUM ION, Macrophage metalloelastase, N-hydroxy-N~2~-{[2-(4-methoxyphenyl)ethyl]sulfonyl}glycinamide, ...
Authors:Calderone, V, Fragai, M, Luchinat, C, Massaro, A, Mordini, A, Mori, M.
Deposit date:2012-08-30
Release date:2012-09-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Contribution of free energy of solvation to ligand affinity in new potent MMPs inhibitors.
To be Published
2ODX
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BU of 2odx by Molmil
Solution structure of Zn(II)Cox4
Descriptor: Cytochrome c oxidase polypeptide IV, ZINC ION
Authors:Coyne III, J.H, Ciofi-Baffoni, S.
Deposit date:2006-12-27
Release date:2007-01-09
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The characterization and role of zinc binding in yeast cox4.
J.Biol.Chem., 282, 2007

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