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1UJ6
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Crystal structure of Thermus thermophilus ribose-5-phosphate isomerase complexed with arabinose-5-phosphate
Descriptor: ARABINOSE-5-PHOSPHATE, CHLORIDE ION, ribose 5-phosphate isomerase
Authors:Hamada, K, Ago, H, Sugahara, M, Nodake, Y, Kuramitsu, S, Yokoyama, S, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-26
Release date:2004-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Oxyanion hole-stabilized stereospecific isomerization in ribose-5-phosphate isomerase (Rpi)
J.Biol.Chem., 278, 2003
1ULR
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Crystal structure of tt0497 from Thermus thermophilus HB8
Descriptor: putative acylphosphatase
Authors:Ago, H, Hamada, K, Sugahara, M, Kuroishi, C, Kuramitsu, S, Yokoyama, S, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-09-16
Release date:2004-11-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of tt0497 from Thermus thermophilus HB8
To be Published
1UJ5
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BU of 1uj5 by Molmil
Crystal structure of Thermus thermophilus ribose-5-phosphate isomerase complexed with ribose-5-phosphate
Descriptor: CHLORIDE ION, RIBULOSE-5-PHOSPHATE, ribose 5-phosphate isomerase
Authors:Hamada, K, Ago, H, Sugahara, M, Nodake, Y, Kuramitsu, S, Yokoyama, S, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-26
Release date:2004-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Oxyanion hole-stabilized stereospecific isomerization in ribose-5-phosphate isomerase (Rpi)
J.Biol.Chem., 278, 2003
1UJN
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Crystal structure of dehydroquinate synthase from Thermus thermophilus HB8
Descriptor: dehydroquinate synthase
Authors:Sugahara, M, Yokoyama, S, Kuramitsu, S, Miyano, M, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-08-06
Release date:2003-09-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of dehydroquinate synthase from Thermus thermophilus HB8 showing functional importance of the dimeric state.
Proteins, 58, 2005
1V27
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BU of 1v27 by Molmil
Solution structure of the first C2 domain of RIM2
Descriptor: Regulating synaptic membrane exocytosis protein 2
Authors:Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-07
Release date:2004-04-07
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the first C2 domain of RIM2
to be published
1UJV
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BU of 1ujv by Molmil
Solution structure of the second PDZ domain of human membrane associated guanylate kinase inverted-2 (MAGI-2)
Descriptor: MEMBRANE ASSOCIATED GUANYLATE KINASE INVERTED-2 (MAGI-2)
Authors:Nameki, N, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-08-11
Release date:2004-02-11
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the second PDZ domain of human membrane associated guanylate kinase inverted-2 (MAGI-2)
To be Published
1V7R
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BU of 1v7r by Molmil
Structure of nucleotide triphosphate pyrophosphatase from pyrococcus horikoshii OT3
Descriptor: CITRIC ACID, hypothetical protein PH1917
Authors:Lokanath, N.K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-12-22
Release date:2003-12-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structures of dimeric nonstandard nucleotide triphosphate pyrophosphatase from Pyrococcus horikoshii OT3: functional significance of interprotomer conformational changes.
J.Mol.Biol., 375, 2008
1UJY
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Solution structure of SH3 domain in Rac/Cdc42 guanine nucleotide exchange factor(GEF) 6
Descriptor: Rho guanine nucleotide exchange factor 6
Authors:He, F, Muto, Y, Uda, H, Koshiba, S, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Kobayashi, N, Tanaka, A, Osanai, T, Matsuo, Y, Ohara, O, Nagase, T, Kikuno, R, Nagayama, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-08-12
Release date:2004-02-12
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of SH3 domain in Rac/Cdc42 guanine nucleotide exchange factor(GEF) 6
To be Published
1UJU
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Solution structure of the fourth PDZ domain of human scribble (KIAA0147 protein)
Descriptor: scribble
Authors:Tochio, N, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-08-11
Release date:2004-02-11
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the fourth PDZ domain of human scribble (KIAA0147 protein)
To be Published
1UKK
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Structure of Osmotically Inducible Protein C from Thermus thermophilus
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Osmotically Inducible Protein C
Authors:Rehse, P.H, Kuramitsu, S, Yokoyama, S, Miyano, M, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-08-24
Release date:2004-05-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystallographic Structure and Biochemical Analysis of the Thermus thermophilus Osmotically Inducible Protein C
J.MOL.BIOL., 338, 2004
1VC8
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Crystal Structure of a T.thermophilus HB8 Ap6A Hydrolase Ndx1-Ap6A Complex
Descriptor: ADENOSINE-5'-PENTAPHOSPHATE, Ndx1
Authors:Iwai, T, Nakagawa, N, Kuramitsu, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-05
Release date:2005-04-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Nudix Protein Ndx1 from Thermus thermophilus HB8 in binary complex with diadenosine hexaphosphate
To be Published
1UKW
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BU of 1ukw by Molmil
Crystal structure of medium-chain acyl-CoA dehydrogenase from Thermus thermophilus HB8
Descriptor: COBALT (II) ION, FLAVIN-ADENINE DINUCLEOTIDE, acyl-CoA dehydrogenase
Authors:Hamada, K, Ago, H, Kuramitsu, S, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-09-02
Release date:2004-11-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of Thermus thermophilus medium-chain acyl-CoA dehydrogenase
To be published
1UK5
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Solution structure of the Murine BAG domain of Bcl2-associated athanogene 3
Descriptor: BAG-family molecular chaperone regulator-3
Authors:Hatta, R, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-08-19
Release date:2004-02-19
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The C-terminal BAG domain of BAG5 induces conformational changes of the Hsp70 nucleotide-binding domain for ADP-ATP exchange
Structure, 18, 2010
1VBI
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BU of 1vbi by Molmil
Crystal structure of type 2 malate/lactate dehydrogenase from thermus thermophilus HB8
Descriptor: 1,2-ETHANEDIOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION, ...
Authors:Mizutani, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-02-27
Release date:2005-04-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of type 2 malate/lactate dehydrogenase from thermus thermophilus HB8
To be Published
1V38
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BU of 1v38 by Molmil
Solution structure of the Sterile Alpha Motif (SAM) domain of mouse SAMSN1
Descriptor: SAM-domain protein SAMSN-1
Authors:Goroncy, A, Kigawa, T, Koshiba, S, Kobayashi, N, Tochio, N, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-29
Release date:2004-04-29
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the Sterile Alpha Motif (SAM) domain of mouse SAMSN1
To be Published
1V4P
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BU of 1v4p by Molmil
Crystal structure of Alanyl-tRNA Synthetase from Pyrococcus horikoshii OT3
Descriptor: ZINC ION, alanyl-tRNA synthetase
Authors:Ishijima, J, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-11-14
Release date:2004-11-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of alanyl-tRNA synthetase editing-domain homolog (PH0574) from a hyperthermophile, Pyrococcus horikoshii OT3 at 1.45 A resolution
Proteins, 62, 2006
1VCF
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BU of 1vcf by Molmil
Crystal Structure of IPP isomerase at I422
Descriptor: CADMIUM ION, FLAVIN MONONUCLEOTIDE, isopentenyl-diphosphate delta-isomerase
Authors:Wada, T, Park, S.-Y, Tame, R.H, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-08
Release date:2005-04-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of IPP isomerase at I422
To be Published
1V7Q
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BU of 1v7q by Molmil
Crystal structure of phosphoglycerate mutase from Thermus thermophilus HB8
Descriptor: phosphoglycerate mutase
Authors:Sugahara, M, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-12-22
Release date:2005-02-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Crystal structure of phosphoglycerate mutase from Thermus thermophilus HB8
To be Published
1VCE
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Crystal structure of project ID PH0725 from Pyrococcus horikoshii OT3
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, diphthine synthase
Authors:Kunishima, N, Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-07
Release date:2005-03-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of diphthine synthase from Pyrococcus horikoshii OT3
To be Published
1V2F
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BU of 1v2f by Molmil
Crystal Structure of T.th HB8 Glutamine Aminotransferase complex with 3-phenylpropionate
Descriptor: Glutamine Aminotransferase, HYDROCINNAMIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Goto, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-15
Release date:2004-07-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structures of glutamine:phenylpyruvate aminotransferase from Thermus thermophilus HB8: induced fit and substrate recognition
J.BIOL.CHEM., 279, 2004
1V2X
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BU of 1v2x by Molmil
TrmH
Descriptor: PHOSPHATE ION, S-ADENOSYLMETHIONINE, tRNA (Gm18) methyltransferase
Authors:Nureki, O, Watanabe, K, Fukai, S, Ishii, R, Endo, Y, Hori, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-17
Release date:2004-05-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Deep Knot Structure for Construction of Active Site and Cofactor Binding Site of tRNA Modification Enzyme
STRUCTURE, 12, 2004
1V3W
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BU of 1v3w by Molmil
Structure of Ferripyochelin binding protein from Pyrococcus horikoshii OT3
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Jeyakanthan, J, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-11-07
Release date:2003-11-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Observation of a calcium-binding site in the gamma-class carbonic anhydrase from Pyrococcus horikoshii.
Acta Crystallogr.,Sect.D, 64, 2008
1V47
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Crystal structure of ATP sulfurylase from Thermus thermophillus HB8 in complex with APS
Descriptor: ADENOSINE-5'-PHOSPHOSULFATE, ATP sulfurylase, CHLORIDE ION, ...
Authors:Taguchi, Y, Sugishima, M, Fukuyama, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-11-11
Release date:2004-04-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Crystal structure of a novel zinc-binding ATP sulfurylase from Thermus thermophilus HB8
Biochemistry, 43, 2004
1V5V
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Crystal Structure of a Component of Glycine Cleavage System: T-protein from Pyrococcus horikoshii OT3 at 1.5 A Resolution
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, aminomethyltransferase
Authors:Lokanath, N.K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-11-26
Release date:2004-10-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of a component of glycine cleavage system: T-protein from Pyrococcus horikoshii OT3 at 1.5 A resolution
Proteins, 58, 2004
1V8E
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Crystal Structure of Glycerophosphoryl Diester Phosphodiesterase from Thermus thermophilus HB8
Descriptor: putative glycerophosphoryl diester phosphodiesterase
Authors:Ishijima, J, Ida, K, Yutani, K, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-05
Release date:2005-01-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of glycerophosphoryl diester phosphodiesterase from Thermus thermophilus HB8
To be Published

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