Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6EU9
DownloadVisualize
BU of 6eu9 by Molmil
Crystal structure of Platynereis dumerilii RAR ligand-binding domain in complex with all-trans retinoic acid
Descriptor: RETINOIC ACID, Retinoic acid receptor
Authors:Handberg-Thorsager, M, Gutierrez-Mazariegos, J, Arold, S.T, Nadendla, E.K, Bertucci, P.Y, Germain, P, Tomancak, P, Pierzchalski, K, Jones, J.W, Albalat, R, Kane, M.A, Bourguet, W, Laudet, V, Arendt, D, Schubert, M.
Deposit date:2017-10-29
Release date:2018-03-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:The ancestral retinoic acid receptor was a low-affinity sensor triggering neuronal differentiation.
Sci Adv, 4, 2018
2IUQ
DownloadVisualize
BU of 2iuq by Molmil
CRYSTAL STRUCTURE OF DITHIONITE-REDUCED AROMATIC AMINE DEHYDROGENASE (AADH) FROM ALCALIGENES FAECALIS IN COMPLEX WITH TRYPTAMINE
Descriptor: 2-(1H-INDOL-3-YL)ETHANAMINE, AROMATIC AMINE DEHYDROGENASE ALPHA SUBUNIT, AROMATIC AMINE DEHYDROGENASE BETA SUBUNIT
Authors:Roujeinikova, A, Scrutton, N, Leys, D.
Deposit date:2006-06-07
Release date:2006-09-20
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Atomic Level Insight Into the Oxidative Half-Reaction of Aromatic Amine Dehydrogenase.
J.Biol.Chem., 281, 2006
6EW6
DownloadVisualize
BU of 6ew6 by Molmil
Crystal structure of the BCL6 BTB domain in complex with anilinopyrimidine ligand
Descriptor: B-cell lymphoma 6 protein, ~{N}2-(2-chlorophenyl)-1,3,5-triazine-2,4-diamine
Authors:Robb, G, Ferguson, A, Hargreaves, D.
Deposit date:2017-11-03
Release date:2018-10-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Development of a Novel B-Cell Lymphoma 6 (BCL6) PROTAC To Provide Insight into Small Molecule Targeting of BCL6.
ACS Chem. Biol., 13, 2018
2IPR
DownloadVisualize
BU of 2ipr by Molmil
Origin binding domain of the SV40 large T antigen (residues 131-259). P21 crystal form
Descriptor: large T antigen
Authors:Martynowski, D, Bochkareva, E, Bochkarev, A.
Deposit date:2006-10-12
Release date:2006-12-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of the origin-binding domain of simian virus 40 large T antigen bound to DNA
Embo J., 25, 2006
6F01
DownloadVisualize
BU of 6f01 by Molmil
ARABIDOPSIS THALIANA GSTF9, GSO3 AND GSOH BOUND
Descriptor: BROMIDE ION, GLUTATHIONE SULFONIC ACID, GLYCEROL, ...
Authors:Tossounian, M.A, Wahni, K, Van Molle, I, Vertommen, D, Rosado, L, Messens, J.
Deposit date:2017-11-17
Release date:2018-08-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Redox-regulated methionine oxidation of Arabidopsis thaliana glutathione transferase Phi9 induces H-site flexibility.
Protein Sci., 28, 2019
2J43
DownloadVisualize
BU of 2j43 by Molmil
Alpha-glucan recognition by family 41 carbohydrate-binding modules from streptococcal virulence factors
Descriptor: SPYDX
Authors:Lammerts van Bueren, A, Higgins, M, Wang, D, Burke, R.D, Boraston, A.B.
Deposit date:2006-08-24
Release date:2006-12-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Identification and Structural Basis of Binding to Host Lung Glycogen by Streptococcal Virulence Factors.
Nat.Struct.Mol.Biol., 14, 2007
2J4C
DownloadVisualize
BU of 2j4c by Molmil
Structure of human Butyrylcholinesterase in complex with 10mM HgCl2
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Colletier, J.P, Frasco, M.F, Carvalho, F, Guilhermino, L, Stojan, J, Fournier, D, Weik, M.
Deposit date:2006-08-28
Release date:2007-03-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Mechanisms of Cholinesterase Inhibition by Inorganic Mercury.
FEBS J., 274, 2007
2J8J
DownloadVisualize
BU of 2j8j by Molmil
Solution Structure of the A4 Domain of Blood Coagulation Factor XI
Descriptor: COAGULATION FACTOR XI
Authors:Samuel, D, Cheng, H, Riley, P.W, Canutescu, A.A, Bu, Z, Walsh, P.N, Roder, H.
Deposit date:2006-10-25
Release date:2007-10-02
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution Structure of the A4 Domain of Factor Xi Sheds Light on the Mechanism of Zymogen Activation.
Proc.Natl.Acad.Sci.USA, 104, 2007
6EYR
DownloadVisualize
BU of 6eyr by Molmil
Crystal structure of the salmonella effector SseK3
Descriptor: Type III secretion system effector protein
Authors:Esposito, D, Rittinger, K.
Deposit date:2017-11-13
Release date:2018-02-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the glycosyltransferase activity of theSalmonellaeffector SseK3.
J. Biol. Chem., 293, 2018
2IXM
DownloadVisualize
BU of 2ixm by Molmil
Structure of human PTPA
Descriptor: SERINE/THREONINE-PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT B'
Authors:Leulliot, N, Vicentini, G, Jordens, J, Quevillon-Cheruel, S, Schiltz, M, Barford, D, Van Tilbeurgh, H, Goris, J.
Deposit date:2006-07-09
Release date:2006-07-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of the Pp2A Phosphatase Activator: Implications for its Pp2A-Specific Ppiase Activity
Mol.Cell, 23, 2006
6F24
DownloadVisualize
BU of 6f24 by Molmil
PH domain from PfAPH
Descriptor: C-terminal PH domain from PfAPH
Authors:Darvill, N, Liu, B, Matthews, S, Soldati-Favre, D, Rouse, S, Benjamin, S, Blake, T, Dubois, D.J, Hammoudi, P.M, Pino, P.
Deposit date:2017-11-23
Release date:2018-12-12
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:C-terminal PH domain from P. falciparum acylated plekstrin homology domain containing protein (APH)
To Be Published
4DMA
DownloadVisualize
BU of 4dma by Molmil
Crystal structure of ERa LBD in complex with RU100132
Descriptor: 2'-bromo-6'-(furan-3-yl)-4'-(hydroxymethyl)biphenyl-4-ol, Estrogen receptor, Nuclear receptor coactivator 1
Authors:Osz, J, Brelivet, Y, Peluso-Iltis, C, Cura, V, Eiler, S, Ruff, M, Bourguet, W, Rochel, N, Moras, D.
Deposit date:2012-02-07
Release date:2012-03-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for a molecular allosteric control mechanism of cofactor binding to nuclear receptors.
Proc.Natl.Acad.Sci.USA, 109, 2012
4DMI
DownloadVisualize
BU of 4dmi by Molmil
Crystal Structure of a Pentameric Capsid Protein Isolated from Metagenomic Phage Sequences (CASP)
Descriptor: 1,2-ETHANEDIOL, Capsid Protein, SODIUM ION
Authors:Craig, T.K, Abendroth, J, Lorimer, D, Burgin Jr, A.B, Segall, A, Rohwer, F.
Deposit date:2012-02-07
Release date:2012-08-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of a Pentameric Capsid Protein Isolated from Metagenomic Phage Sequences
To be Published
2IGC
DownloadVisualize
BU of 2igc by Molmil
Structure of Spin labeled T4 Lysozyme Mutant T115R1A
Descriptor: Lysozyme, S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate
Authors:Guo, Z, Cascio, D, Hideg, K, Hubbell, W.L.
Deposit date:2006-09-22
Release date:2007-06-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural determinants of nitroxide motion in spin-labeled proteins: Tertiary contact and solvent-inaccessible sites in helix G of T4 lysozyme.
Protein Sci., 16, 2007
2IUV
DownloadVisualize
BU of 2iuv by Molmil
CRYSTAL STRUCTURE OF N-QUINOL FORM OF AROMATIC AMINE DEHYDROGENASE (AADH) FROM ALCALIGENES FAECALIS, FORM B
Descriptor: AROMATIC AMINE DEHYDROGENASE ALPHA SUBUNIT, AROMATIC AMINE DEHYDROGENASE BETA SUBUNIT
Authors:Roujeinikova, A, Scrutton, N, Leys, D.
Deposit date:2006-06-07
Release date:2006-09-20
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Atomic level insight into the oxidative half-reaction of aromatic amine dehydrogenase.
J. Biol. Chem., 281, 2006
2IL5
DownloadVisualize
BU of 2il5 by Molmil
Structure of Protein of Unknown Function SA2116 from Staphylococcus aureus
Descriptor: Hypothetical protein, SODIUM ION
Authors:Osipiuk, J, Quartey, P, Holzle, D, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-10-02
Release date:2006-10-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-ray crystal structure of hypothetical protein SA2116 from Staphylococcus aureus.
To be Published
6EW8
DownloadVisualize
BU of 6ew8 by Molmil
Crystal structure of the BCL6 BTB domain in complex with anilinopyrimidine ligand
Descriptor: B-cell lymphoma 6 protein, CHLORIDE ION, anilinopyrimidine ligand
Authors:Robb, G, Ferguson, A, Hargreaves, D.
Deposit date:2017-11-03
Release date:2018-10-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Development of a Novel B-Cell Lymphoma 6 (BCL6) PROTAC To Provide Insight into Small Molecule Targeting of BCL6.
ACS Chem. Biol., 13, 2018
6EY8
DownloadVisualize
BU of 6ey8 by Molmil
Estimation of relative drug-target residence times by random acceleration molecular dynamics simulation
Descriptor: DIMETHYL SULFOXIDE, Heat shock protein HSP 90-alpha, SULFATE ION, ...
Authors:Musil, D, Lehmann, M, Buchstaller, H.-P.
Deposit date:2017-11-11
Release date:2018-05-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Estimation of Drug-Target Residence Times by tau-Random Acceleration Molecular Dynamics Simulations.
J Chem Theory Comput, 14, 2018
6F7B
DownloadVisualize
BU of 6f7b by Molmil
Crystal structure of the human Bub1 kinase domain in complex with BAY 1816032
Descriptor: 2-[3,5-bis(fluoranyl)-4-[[3-[5-methoxy-4-[(3-methoxypyridin-4-yl)amino]pyrimidin-2-yl]indazol-1-yl]methyl]phenoxy]ethanol, MAGNESIUM ION, Mitotic checkpoint serine/threonine-protein kinase BUB1
Authors:Holton, S.J, Siemeister, G, Mengel, A, Bone, W, Schroeder, J, Zitzmann-Kolbe, S, Briem, H, Fernandez-Montalvan, A, Prechtl, S, Moenning, U, von Ahsen, O, Johanssen, J, Cleve, A, Puetter, V, Hitchcock, M, von Nussbaum, F, Brands, M, Mumberg, D, Ziegelbauer, K.
Deposit date:2017-12-08
Release date:2018-12-19
Last modified:2021-05-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Inhibition of BUB1 Kinase by BAY 1816032 Sensitizes Tumor Cells toward Taxanes, ATR, and PARP InhibitorsIn VitroandIn Vivo.
Clin.Cancer Res., 25, 2019
2FUE
DownloadVisualize
BU of 2fue by Molmil
Human alpha-Phosphomannomutase 1 with D-mannose 1-phosphate and Mg2+ cofactor bound
Descriptor: 1-O-phosphono-alpha-D-mannopyranose, MAGNESIUM ION, Phosphomannomutase 1
Authors:Silvaggi, N.R, Zhang, C, Lu, Z, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2006-01-26
Release date:2006-03-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The X-ray crystal structures of human alpha-phosphomannomutase 1 reveal the structural basis of congenital disorder of glycosylation type 1a.
J.Biol.Chem., 281, 2006
4DWO
DownloadVisualize
BU of 4dwo by Molmil
Crystal structure of a haloacid dehalogenase-like hydrolase (Target EFI-900331) from Bacteroides thetaiotaomicron with bound Mg crystal form II
Descriptor: GLYCEROL, Haloacid dehalogenase-like hydrolase, MAGNESIUM ION
Authors:Vetting, M.W, Wasserman, S.R, Morisco, L.L, Sojitra, S, Allen, K.N, Dunaway-Mariano, D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-02-26
Release date:2012-03-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of a haloacid dehalogenase-like hydrolase (Target EFI-900331) from Bacteroides thetaiotaomicron with bound Mg crystal form II
To be Published
2FUQ
DownloadVisualize
BU of 2fuq by Molmil
Crystal Structure of Heparinase II
Descriptor: FORMIC ACID, PHOSPHATE ION, ZINC ION, ...
Authors:Shaya, D, Cygler, M.
Deposit date:2006-01-27
Release date:2006-04-18
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal Structure of Heparinase II from Pedobacter heparinus and Its Complex with a Disaccharide Product.
J.Biol.Chem., 281, 2006
6F9G
DownloadVisualize
BU of 6f9g by Molmil
Ligand binding domain of P. putida KT2440 polyamine chemorecpetors McpU in complex putrescine.
Descriptor: 1,4-DIAMINOBUTANE, ACETATE ION, GLYCEROL, ...
Authors:Gavira, J.A, Conejero-Muriel, M.T, Ortega, A, Martin-Mora, D, Corral-Lugo, A, Morel, B, Krell, T.
Deposit date:2017-12-14
Release date:2018-03-28
Last modified:2018-06-13
Method:X-RAY DIFFRACTION (2.388 Å)
Cite:Structural Basis for Polyamine Binding at the dCACHE Domain of the McpU Chemoreceptor from Pseudomonas putida.
J. Mol. Biol., 430, 2018
6F05
DownloadVisualize
BU of 6f05 by Molmil
ARABIDOPSIS THALIANA GSTF9, GSO3 BOUND
Descriptor: CHLORIDE ION, GLUTATHIONE SULFONIC ACID, GLYCEROL, ...
Authors:Tossounian, M.A, Wahni, K, VanMolle, I, Vertommen, D, Rosado, L, Messens, J.
Deposit date:2017-11-17
Release date:2018-08-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Redox-regulated methionine oxidation of Arabidopsis thaliana glutathione transferase Phi9 induces H-site flexibility.
Protein Sci., 28, 2019
2FYU
DownloadVisualize
BU of 2fyu by Molmil
Crystal structure of bovine heart mitochondrial bc1 with jg144 inhibitor
Descriptor: (5S)-3-ANILINO-5-(2,4-DIFLUOROPHENYL)-5-METHYL-1,3-OXAZOLIDINE-2,4-DIONE, Cytochrome b, Cytochrome c1, ...
Authors:Xia, D, Esser, L.
Deposit date:2006-02-08
Release date:2006-08-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Surface-modulated motion switch: Capture and release of iron-sulfur protein in the cytochrome bc1 complex.
Proc.Natl.Acad.Sci.Usa, 103, 2006

224004

건을2024-08-21부터공개중

PDB statisticsPDBj update infoContact PDBjnumon