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5YW2
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BU of 5yw2 by Molmil
Crystal structure of Adenine phosphoribosyltransferase from Francisella tularensis.
Descriptor: Adenine phosphoribosyltransferase, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Pavithra, G.C, Ramagopal, U.A.
Deposit date:2017-11-28
Release date:2018-01-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Crystal structures of APRT from Francisella tularensis - an N-H···N hydrogen bond imparts adenine specificity in adenine phosporibosyltransferases.
FEBS J., 285, 2018
5ZNQ
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BU of 5znq by Molmil
Crystal structure of APRT from Y. pseudotuberculosis with bound adenine (P21 space group).
Descriptor: ADENINE, Adenine phosphoribosyltransferase, CHLORIDE ION, ...
Authors:Pavithra, G.C, Ramagopal, U.A.
Deposit date:2018-04-10
Release date:2019-04-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of APRT from Y. pseudotuberculosis with bound adenine (P21 space group).
To be published
5ZMI
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BU of 5zmi by Molmil
Crystal structure of APRT from Y. pseudotuberculosis in complex with adenine.
Descriptor: ADENINE, Adenine phosphoribosyltransferase, SODIUM ION
Authors:Pavithra, G.C, Fox, G.C, Ramagopal, U.A.
Deposit date:2018-04-03
Release date:2019-04-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis
To be published
5ZC7
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BU of 5zc7 by Molmil
Crystal structure of APRT from Y. pseudotuberculosis with bound adenine (P63 space group).
Descriptor: ACETATE ION, ADENINE, Adenine phosphoribosyltransferase, ...
Authors:Pavithra, G.C, Ramagopal, U.A.
Deposit date:2018-02-15
Release date:2019-02-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis
To be published
3QNM
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BU of 3qnm by Molmil
Haloalkane Dehalogenase Family Member from Bacteroides thetaiotaomicron of Unknown Function
Descriptor: CHLORIDE ION, Haloacid dehalogenase-like hydrolase, MAGNESIUM ION
Authors:Matthew, M.W, Ramagopal, U.A, Toro, R, Dickey, M, Sauder, J.M, Poulter, C.D, Burley, S.K, Gerlt, J.A, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2011-02-08
Release date:2011-03-30
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Haloalkane Dehalogenase Family Member from Bacteroides thetaiotaomicron of Unknown Function
To be Published
3RRQ
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BU of 3rrq by Molmil
Crystal structure of the extracellular domain of human PD-1
Descriptor: Programmed cell death protein 1
Authors:Lazar-Molnar, E, Ramagopal, U.A, Nathenson, S.G, Almo, S.C.
Deposit date:2011-04-29
Release date:2012-05-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the extracellular domain of human PD-1
To be Published
3RP1
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BU of 3rp1 by Molmil
Crystal structure of Human LAIR-1 in C2 space group
Descriptor: Leukocyte-associated immunoglobulin-like receptor 1
Authors:Sampathkumar, P, Ramagopal, U.A, Yan, Q, Toro, R, Nathenson, S, Bonanno, J, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-04-26
Release date:2011-06-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of Human LAIR-1 in C2 space group
To be Published
3RBG
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BU of 3rbg by Molmil
Crystal structure analysis of Class-I MHC restricted T-cell associated molecule
Descriptor: Cytotoxic and regulatory T-cell molecule, PHOSPHATE ION
Authors:Rubinstein, R, Ramagopal, U.A, Toro, R, Nathenson, S.G, Fiser, A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
Deposit date:2011-03-29
Release date:2011-05-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Functional classification of immune regulatory proteins.
Structure, 21, 2013
3RNQ
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BU of 3rnq by Molmil
Crystal structure of the complex between the extracellular domains of mouse PD-1 mutant and PD-L2
Descriptor: Programmed cell death 1 ligand 2, Programmed cell death protein 1
Authors:Lazar-Molnar, E, Ramagopal, U.A, Nathenson, S.G, Almo, S.C.
Deposit date:2011-04-22
Release date:2011-06-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the complex between the extracellular domains of mouse PD-1 mutant and PD-L2
To be Published
3RNK
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BU of 3rnk by Molmil
Crystal structure of the complex between mouse PD-1 mutant and PD-L2 IgV domain
Descriptor: Programmed cell death 1 ligand 2, Programmed cell death protein 1
Authors:Lazar-Molnar, E, Ramagopal, U.A, Cao, E, Nathenson, S.G, Almo, S.C.
Deposit date:2011-04-22
Release date:2011-06-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal structure of the complex between mouse PD-1 mutant and PD-L2 IgV domain
To be Published
3RRA
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BU of 3rra by Molmil
Crystal structure of enolase PRK14017 (target EFI-500653) from Ralstonia pickettii 12J with magnesium bound
Descriptor: CHLORIDE ION, MAGNESIUM ION, Putative D-galactonate dehydratase
Authors:Patskovsky, Y, Ramagopal, U.A, Hillerich, B, Seidel, R.D, Zencheck, W.D, Toro, R, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2011-04-29
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of enolase PRK14017 from Ralstonia pickettii
To be Published
3SBW
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BU of 3sbw by Molmil
Crystal structure of the complex between the extracellular domains of mouse PD-1 mutant and human PD-L1
Descriptor: Programmed cell death 1 ligand 1, Programmed cell death protein 1
Authors:Lazar-Molnar, E, Ramagopal, U.A, Cao, E, Nathenson, S.G, Almo, S.C.
Deposit date:2011-06-06
Release date:2011-07-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Crystal structure of the complex between the extracellular domains of mouse PD-1 mutant and human PD-L1
To be published
3OCQ
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BU of 3ocq by Molmil
crystal structure of tRNA-specific Adenosine deaminase from Salmonella enterica
Descriptor: Putative Cytosine/adenosine deaminase, ZINC ION
Authors:Kim, J, Ramagopal, U.A, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-08-10
Release date:2010-08-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of tRNA-specific Adenosine deaminase from Salmonella enterica
To be Published
3ODG
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BU of 3odg by Molmil
crystal structure of xanthosine phosphorylase bound with xanthine from Yersinia pseudotuberculosis
Descriptor: CHLORIDE ION, XANTHINE, Xanthosine phosphorylase
Authors:Kim, J, Ramagopal, U.A, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-08-11
Release date:2010-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:crystal structure of xanthosine phosphorylase bound with xanthine from Yersinia pseudotuberculosis
To be Published
3OF3
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BU of 3of3 by Molmil
Crystal structure of PNP with an inhibitor DADME_immH from Vibrio cholerae
Descriptor: 7-[[(3R,4R)-3-(hydroxymethyl)-4-oxidanyl-pyrrolidin-1-ium-1-yl]methyl]-3,5-dihydropyrrolo[3,2-d]pyrimidin-4-one, PHOSPHATE ION, Purine nucleoside phosphorylase deoD-type 1
Authors:Kim, J, Ramagopal, U.A, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-08-13
Release date:2010-09-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structure of PNP with an inhibitor DADME_immH from Vibrio cholerae
To be Published
3OCC
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BU of 3occ by Molmil
Crystal structure of PNP with DADMEimmH from Yersinia pseudotuberculosis
Descriptor: 7-[[(3R,4R)-3-(hydroxymethyl)-4-oxidanyl-pyrrolidin-1-ium-1-yl]methyl]-3,5-dihydropyrrolo[3,2-d]pyrimidin-4-one, PHOSPHATE ION, Purine nucleoside phosphorylase deoD-type
Authors:Kim, J, Ramagopal, U.A, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-08-09
Release date:2010-11-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:crystal structure of PNP with DADMEimmH from Yersinia pseudotuberculosis
To be Published
3OHP
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BU of 3ohp by Molmil
Crystal structure of HGPRT from Vibrio cholerae
Descriptor: Hypoxanthine phosphoribosyltransferase
Authors:Kim, J, Ramagopal, U.A, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-08-17
Release date:2010-09-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal structure of HGPRT from Vibrio cholerae
To be Published
3B9I
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BU of 3b9i by Molmil
Crystal Structure of mouse GITRL at 2.5 A.
Descriptor: GITR ligand
Authors:Chattopadhyay, K, Ramagopal, U.A, Nathenson, S.G, Almo, S.C.
Deposit date:2007-11-05
Release date:2008-01-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Evolution of GITRL immune function: murine GITRL exhibits unique structural and biochemical properties within the TNF superfamily.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3BP6
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BU of 3bp6 by Molmil
Crystal structure of the mouse PD-1 Mutant and PD-L2 complex
Descriptor: GLYCEROL, Programmed cell death 1 ligand 2, Programmed cell death protein 1
Authors:Yan, Q, Lazar-Molnar, E, Cao, E, Ramagopal, U.A, Toro, R, Nathenson, S.G, Almo, S.C.
Deposit date:2007-12-18
Release date:2009-02-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the mouse PD-1 A99L and PD-L2 complex
To be published
3C3M
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BU of 3c3m by Molmil
Crystal structure of the N-terminal domain of response regulator receiver protein from Methanoculleus marisnigri JR1
Descriptor: GLYCEROL, Response regulator receiver protein
Authors:Patskovsky, Y, Ramagopal, U.A, Toro, R, Meyer, A.J, Dickey, M, Chang, S, Groshong, C, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-01-28
Release date:2008-02-05
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the N-terminal domain of response regulator receiver protein from Methanoculleus marisnigri JR1.
To be Published
3BGS
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BU of 3bgs by Molmil
Structure of human purine nucleoside phosphorylase with L-DADMe-ImmH and phosphate
Descriptor: 7-[[(3R,4R)-3-(hydroxymethyl)-4-oxidanyl-pyrrolidin-1-ium-1-yl]methyl]-3,5-dihydropyrrolo[3,2-d]pyrimidin-4-one, PHOSPHATE ION, purine nucleoside phosphorylase
Authors:Murkin, A.S, Ramagopal, U.A, Almo, S.C, Schramm, V.L.
Deposit date:2007-11-27
Release date:2008-01-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:L-Enantiomers of transition state analogue inhibitors bound to human purine nucleoside phosphorylase
J.Am.Chem.Soc., 130, 2008
3CFY
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BU of 3cfy by Molmil
Crystal structure of signal receiver domain of putative Luxo repressor protein from Vibrio parahaemolyticus
Descriptor: Putative LuxO repressor protein
Authors:Patskovsky, Y, Ramagopal, U.A, Fong, R, Freeman, J, Iizuka, M, Groshong, C, Smith, D, Wasserman, S.R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-03-04
Release date:2008-03-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Signal Receiver Domain of Putative Luxo Repressor Protein from Vibrio Parahaemolyticus.
To be Published
3CJP
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BU of 3cjp by Molmil
Crystal structure of an uncharacterized amidohydrolase CAC3332 from Clostridium acetobutylicum
Descriptor: Predicted amidohydrolase, dihydroorotase family, ZINC ION
Authors:Malashkevich, V.N, Toro, R, Ramagopal, U.A, Bonanno, J.B, Meyer, A, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-03-13
Release date:2008-03-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of an uncharacterized amidohydrolase CAC3332 from Clostridium acetobutylicum.
To be Published
2IF7
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BU of 2if7 by Molmil
Crystal Structure of NTB-A
Descriptor: CALCIUM ION, CHLORIDE ION, SLAM family member 6
Authors:Cao, E, Ramagopal, U.A, Fedorov, A.A, Fedorov, E.V, Nathenson, S.G, Almo, S.C.
Deposit date:2006-09-20
Release date:2006-10-17
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:NTB-A Receptor Crystal Structure: Insights into Homophilic Interactions in the Signaling Lymphocytic Activation Molecule Receptor Family.
Immunity, 25, 2006
2IEC
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BU of 2iec by Molmil
Crystal Structure of uncharacterized conserved archael protein from Methanopyrus kandleri
Descriptor: MAGNESIUM ION, Uncharacterized protein conserved in archaea
Authors:Bonanno, J.B, Ramagopal, U.A, Dickey, M, Bain, K.T, Powell, A, Ozyurt, S, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-09-18
Release date:2006-10-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Crystal Structure of uncharacterized conserved archael protein from Methanopyrus kandleri
TO BE PUBLISHED

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