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2CWH
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Crystal Structure of delta1-piperideine-2-carboxylate reductase from Pseudomonas syringae complexed with NADPH and pyrrole-2-carboxylate
Descriptor: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PYRROLE-2-CARBOXYLATE, delta1-piperideine-2-carboxylate reductase
Authors:Goto, M, Muramatsu, H, Mihara, H, Kurihara, T, Esaki, N, Omi, R, Miyahara, I, Hirotsu, K.
Deposit date:2005-06-20
Release date:2005-10-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of Delta1-piperideine-2-carboxylate/Delta1-pyrroline-2-carboxylate reductase belonging to a new family of NAD(P)H-dependent oxidoreductases: conformational change, substrate recognition, and stereochemistry of the reaction
J.Biol.Chem., 280, 2005
2CWF
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Crystal Structure of delta1-piperideine-2-carboxylate reductase from Pseudomonas syringae complexed with NADPH
Descriptor: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, delta1-piperideine-2-carboxylate reductase
Authors:Goto, M, Muramatsu, H, Mihara, H, Kurihara, T, Esaki, N, Omi, R, Miyahara, I, Hirotsu, K.
Deposit date:2005-06-20
Release date:2005-10-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of Delta1-piperideine-2-carboxylate/Delta1-pyrroline-2-carboxylate reductase belonging to a new family of NAD(P)H-dependent oxidoreductases: conformational change, substrate recognition, and stereochemistry of the reaction
J.Biol.Chem., 280, 2005
2DQ4
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Crystal structure of threonine 3-dehydrogenase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, L-threonine 3-dehydrogenase, ZINC ION
Authors:Omi, R, Yao, T, Goto, M, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-19
Release date:2007-06-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of threonine 3-dehydrogenase
To be Published
1ET0
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BU of 1et0 by Molmil
CRYSTAL STRUCTURE OF AMINODEOXYCHORISMATE LYASE FROM ESCHERICHIA COLI
Descriptor: 4-AMINO-4-DEOXYCHORISMATE LYASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Nakai, T, Mizutani, H, Miyahara, I, Hirotsu, K, Takeda, S, Jhee, K.H, Yoshimura, T, Esaki, N.
Deposit date:2000-04-12
Release date:2000-07-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Three-dimensional structure of 4-amino-4-deoxychorismate lyase from Escherichia coli.
J.Biochem.(Tokyo), 128, 2000
1G7X
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BU of 1g7x by Molmil
ASPARTATE AMINOTRANSFERASE ACTIVE SITE MUTANT N194A/R292L/R386L
Descriptor: ASPARTATE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Mizuguchi, H, Hayashi, H, Okada, K, Miyahara, I, Hirotsu, K, Kagamiyama, H.
Deposit date:2000-11-15
Release date:2000-11-29
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Strain is more important than electrostatic interaction in controlling the pKa of the catalytic group in aspartate aminotransferase.
Biochemistry, 40, 2001
1G4V
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BU of 1g4v by Molmil
ASPARTATE AMINOTRANSFERASE ACTIVE SITE MUTANT N194A/Y225F
Descriptor: ASPARTATE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Mizuguchi, H, Hayashi, H, Okada, K, Miyahara, I, Hirotsu, K, Kagamiyama, H.
Deposit date:2000-10-28
Release date:2000-11-22
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Strain is more important than electrostatic interaction in controlling the pKa of the catalytic group in aspartate aminotransferase.
Biochemistry, 40, 2001
1G7W
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BU of 1g7w by Molmil
ASPARTATE AMINOTRANSFERASE ACTIVE SITE MUTANT N194A/R386L
Descriptor: ASPARTATE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Mizuguchi, H, Hayashi, H, Okada, K, Miyahara, I, Hirotsu, K, Kagamiyama, H.
Deposit date:2000-11-15
Release date:2000-11-29
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Strain is more important than electrostatic interaction in controlling the pKa of the catalytic group in aspartate aminotransferase.
Biochemistry, 40, 2001
1GEX
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BU of 1gex by Molmil
CRYSTAL STRUCTURE OF HISTIDINOL-PHOSPHATE AMINOTRANSFERASE COMPLEXED WITH HISTIDINOL-PHOSPHATE
Descriptor: HISTIDINOL-PHOSPHATE AMINOTRANSFERASE, PHOSPHORIC ACID MONO-[2-AMINO-3-(3H-IMIDAZOL-4-YL)-PROPYL]ESTER, PYRIDOXAL-5'-PHOSPHATE
Authors:Haruyama, K, Nakai, T, Miyahara, I, Hirotsu, K, Mizuguchi, H, Hayashi, H, Kagamiyama, H.
Deposit date:2000-11-30
Release date:2001-04-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of Escherichia coli histidinol-phosphate aminotransferase and its complexes with histidinol-phosphate and N-(5'-phosphopyridoxyl)-L-glutamate: double substrate recognition of the enzyme.
Biochemistry, 40, 2001
1GEY
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CRYSTAL STRUCTURE OF HISTIDINOL-PHOSPHATE AMINOTRANSFERASE COMPLEXED WITH N-(5'-PHOSPHOPYRIDOXYL)-L-GLUTAMATE
Descriptor: 4-[(1,3-DICARBOXY-PROPYLAMINO)-METHYL]-3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDINIUM, HISTIDINOL-PHOSPHATE AMINOTRANSFERASE
Authors:Haruyama, K, Nakai, T, Miyahara, I, Hirotsu, K, Mizuguchi, H, Hayashi, H, Kagamiyama, H.
Deposit date:2000-11-30
Release date:2001-04-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of Escherichia coli histidinol-phosphate aminotransferase and its complexes with histidinol-phosphate and N-(5'-phosphopyridoxyl)-L-glutamate: double substrate recognition of the enzyme.
Biochemistry, 40, 2001
1GEW
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CRYSTAL STRUCTURE OF HISTIDINOL-PHOSPHATE AMINOTRANSFERASE COMPLEXED WITH PYRIDOXAL 5'-PHOSPHATE
Descriptor: HISTIDINOL-PHOSPHATE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Haruyama, K, Nakai, T, Miyahara, I, Hirotsu, K, Mizuguchi, H, Hayashi, H, Kagamiyama, H.
Deposit date:2000-11-30
Release date:2001-04-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of Escherichia coli histidinol-phosphate aminotransferase and its complexes with histidinol-phosphate and N-(5'-phosphopyridoxyl)-L-glutamate: double substrate recognition of the enzyme.
Biochemistry, 40, 2001
1EVI
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BU of 1evi by Molmil
THREE-DIMENSIONAL STRUCTURE OF THE PURPLE INTERMEDIATE OF PORCINE KIDNEY D-AMINO ACID OXIDASE
Descriptor: 3,4-DIHYDRO-2H-PYRROLIUM-5-CARBOXYLATE, D-AMINO ACID OXIDASE, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Mizutani, H, Miyahara, I, Hirotsu, K, Nishina, Y, Shiga, K, Setoyama, C, Miura, R.
Deposit date:2000-04-20
Release date:2000-10-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Three-dimensional structure of the purple intermediate of porcine kidney D-amino acid oxidase. Optimization of the oxidative half-reaction through alignment of the product with reduced flavin.
J.Biochem.(Tokyo), 128, 2000
1UDY
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BU of 1udy by Molmil
Medium-Chain Acyl-CoA Dehydrogenase with 3-Thiaoctanoyl-CoA
Descriptor: 3-THIAOCTANOYL-COENZYME A, Acyl-CoA dehydrogenase, medium-chain specific, ...
Authors:Satoh, A, Nakajima, Y, Miyahara, I, Hirotsu, K, Tanaka, T, Nishina, Y, Shiga, K, Tamaoki, H, Setoyama, C, Miura, R.
Deposit date:2003-05-07
Release date:2003-12-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the transition state analog of medium-chain acyl-CoA dehydrogenase. Crystallographic and molecular orbital studies on the charge-transfer complex of medium-chain acyl-CoA dehydrogenase with 3-thiaoctanoyl-CoA
J.BIOCHEM.(TOKYO), 134, 2003
1VE9
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BU of 1ve9 by Molmil
Porcine kidney D-amino acid oxidase
Descriptor: BENZOIC ACID, D-amino acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Mizutani, H, Miyahara, I, Hirotsu, K, Nishina, Y, Shiga, K, Setoyama, C, Miura, R.
Deposit date:2004-03-29
Release date:2004-04-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Three-dimensional structure of porcine kidney D-amino acid oxidase at 3.0 A resolution.
J.Biochem., 120, 1996
1VEF
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BU of 1vef by Molmil
Acetylornithine aminotransferase from Thermus thermophilus HB8
Descriptor: Acetylornithine/acetyl-lysine aminotransferase, PYRIDOXAL-5'-PHOSPHATE
Authors:Matsumura, M, Goto, M, Omi, R, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-30
Release date:2005-08-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Three-Dimensional Strutcure of Acetylornithine aminotransferase from Thermus thermophilus HB8
To be Published
1V93
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BU of 1v93 by Molmil
5,10-Methylenetetrahydrofolate Reductase from Thermus thermophilus HB8
Descriptor: 1,4-DIETHYLENE DIOXIDE, 5,10-Methylenetetrahydrofolate reductase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Nakajima, Y, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-20
Release date:2004-02-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of 5,10-Methylenetetrahydrofolate reductase from Thermus thermophilus HB8
To be Published
1WTJ
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BU of 1wtj by Molmil
Crystal Structure of delta1-piperideine-2-carboxylate reductase from Pseudomonas syringae pvar.tomato
Descriptor: ureidoglycolate dehydrogenase
Authors:Goto, M, Muramatsu, H, Mihara, H, Kurihara, T, Esaki, N, Omi, R, Miyahara, I, Hirotsu, K.
Deposit date:2004-11-24
Release date:2005-10-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structures of Delta1-piperideine-2-carboxylate/Delta1-pyrroline-2-carboxylate reductase belonging to a new family of NAD(P)H-dependent oxidoreductases: conformational change, substrate recognition, and stereochemistry of the reaction
J.Biol.Chem., 280, 2005
1WTC
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BU of 1wtc by Molmil
Crystal Structure of S.pombe Serine Racemase complex with AMPPCP
Descriptor: Hypothetical protein C320.14 in chromosome III, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Goto, M, Miyahara, I, Hirotsu, K.
Deposit date:2004-11-22
Release date:2005-11-01
Last modified:2014-05-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a homolog of mammalian serine racemase from Schizosaccharomyces pombe
J.Biol.Chem., 284, 2009
1WKH
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BU of 1wkh by Molmil
Acetylornithine aminotransferase from thermus thermophilus HB8
Descriptor: 4-[(1,3-DICARBOXY-PROPYLAMINO)-METHYL]-3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDINIUM, Acetylornithine/acetyl-lysine aminotransferase
Authors:Matsumura, M, Goto, M, Omi, R, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-31
Release date:2005-09-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Acetylornithine aminotransferase from thermus thermophilus HB8
To be Published
1WKG
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BU of 1wkg by Molmil
Acetylornithine aminotransferase from thermus thermophilus HB8
Descriptor: Acetylornithine/acetyl-lysine aminotransferase, N~2~-ACETYL-N~5~-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-L-ORNITHINE
Authors:Matsumura, M, Goto, M, Omi, R, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-31
Release date:2005-09-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Acetylornithine aminotransferase from thermus thermophilus HB8
To be Published
1BKG
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BU of 1bkg by Molmil
ASPARTATE AMINOTRANSFERASE FROM THERMUS THERMOPHILUS WITH MALEATE
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, ASPARTATE AMINOTRANSFERASE, MALEIC ACID
Authors:Nakai, T, Okada, K, Kuramitsu, S, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:1998-07-07
Release date:1999-07-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of Thermus thermophilus HB8 aspartate aminotransferase and its complex with maleate.
Biochemistry, 38, 1999
1BJW
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BU of 1bjw by Molmil
ASPARTATE AMINOTRANSFERASE FROM THERMUS THERMOPHILUS
Descriptor: ASPARTATE AMINOTRANSFERASE, PHOSPHATE ION
Authors:Nakai, T, Okada, K, Kuramitsu, S, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:1998-06-30
Release date:1999-07-22
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of Thermus thermophilus HB8 aspartate aminotransferase and its complex with maleate.
Biochemistry, 38, 1999
1GC3
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BU of 1gc3 by Molmil
THERMUS THERMOPHILUS ASPARTATE AMINOTRANSFERASE TETRA MUTANT 2 COMPLEXED WITH TRYPTOPHAN
Descriptor: ASPARTATE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE, TRYPTOPHAN
Authors:Ura, H, Nakai, T, Hirotsu, K, Kuramitsu, S.
Deposit date:2000-07-18
Release date:2001-09-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Substrate recognition mechanism of thermophilic dual-substrate enzyme.
J.Biochem., 130, 2001
1GCK
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BU of 1gck by Molmil
THERMUS THERMOPHILUS ASPARTATE AMINOTRANSFERASE DOUBLE MUTANT 1 COMPLEXED WITH ASPARTATE
Descriptor: ASPARTATE AMINOTRANSFERASE, ASPARTIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Ura, H, Nakai, T, Hirotsu, K, Kuramitsu, S.
Deposit date:2000-08-04
Release date:2001-11-14
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Substrate recognition mechanism of thermophilic dual-substrate enzyme.
J.Biochem., 130, 2001
1GC4
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BU of 1gc4 by Molmil
THERMUS THERMOPHILUS ASPARTATE AMINOTRANSFERASE TETRA MUTANT 2 COMPLEXED WITH ASPARTATE
Descriptor: ASPARTATE AMINOTRANSFERASE, ASPARTIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Ura, H, Nakai, T, Hirotsu, K, Kuramitsu, S.
Deposit date:2000-07-19
Release date:2001-09-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Substrate recognition mechanism of thermophilic dual-substrate enzyme.
J.Biochem., 130, 2001
1J1Z
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BU of 1j1z by Molmil
Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase in complex with substrate
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ASPARTIC ACID, Argininosuccinate Synthetase, ...
Authors:Goto, M, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-12-24
Release date:2003-04-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of argininosuccinate synthetase in enzyme-ATP-substrates and enzyme-AMP-product forms
J.Biol.Chem., 278, 2003

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