Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3CFA
DownloadVisualize
BU of 3cfa by Molmil
Anemonia sulcata red fluorescent protein asRFP
Descriptor: GFP-like fluorescent protein
Authors:Kachalova, G.S, Gundel, S, Wiedenmann, J, Bartunik, H.D.
Deposit date:2008-03-03
Release date:2009-03-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of Anemonia sulcata red fluorescent protein asRFP
To be Published
3W28
DownloadVisualize
BU of 3w28 by Molmil
The high-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E251A mutant with xylotriose
Descriptor: Glycoside hydrolase family 10, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-alpha-D-xylopyranose
Authors:Han, X, Gao, J, Shang, N, Huang, C.-H, Ko, T.-P, Zhu, Z, Wiegel, J, Shao, W, Guo, R.-T.
Deposit date:2012-11-27
Release date:2013-04-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Structural and functional analyses of catalytic domain of GH10 xylanase from Thermoanaerobacterium saccharolyticum JW/SL-YS485
Proteins, 81, 2013
3W29
DownloadVisualize
BU of 3w29 by Molmil
The high-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E251A mutant with xylotetraose
Descriptor: Glycoside hydrolase family 10, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-alpha-D-xylopyranose
Authors:Han, X, Gao, J, Shang, N, Huang, C.-H, Ko, T.-P, Zhu, Z, Wiegel, J, Shao, W, Guo, R.-T.
Deposit date:2012-11-27
Release date:2013-04-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Structural and functional analyses of catalytic domain of GH10 xylanase from Thermoanaerobacterium saccharolyticum JW/SL-YS485
Proteins, 81, 2013
3W27
DownloadVisualize
BU of 3w27 by Molmil
The high-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E251A mutant with xylobiose
Descriptor: Glycoside hydrolase family 10, beta-D-xylopyranose-(1-4)-alpha-D-xylopyranose
Authors:Han, X, Gao, J, Shang, N, Huang, C.-H, Ko, T.-P, Zhu, Z, Wiegel, J, Shao, W, Guo, R.-T.
Deposit date:2012-11-27
Release date:2013-04-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Structural and functional analyses of catalytic domain of GH10 xylanase from Thermoanaerobacterium saccharolyticum JW/SL-YS485
Proteins, 81, 2013
3W25
DownloadVisualize
BU of 3w25 by Molmil
The high-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E146A mutant with xylobiose
Descriptor: Glycoside hydrolase family 10, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Han, X, Gao, J, Shang, N, Huang, C.-H, Ko, T.-P, Zhu, Z, Wiegel, J, Shao, W, Guo, R.-T.
Deposit date:2012-11-27
Release date:2013-04-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Structural and functional analyses of catalytic domain of GH10 xylanase from Thermoanaerobacterium saccharolyticum JW/SL-YS485
Proteins, 81, 2013
3E5T
DownloadVisualize
BU of 3e5t by Molmil
Crystal Structure Analysis of FP611
Descriptor: Red fluorescent protein eqFP611
Authors:Nar, H, Nienhaus, K, Nienhaus, U, Wiedenmann, J.
Deposit date:2008-08-14
Release date:2008-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Trans-cis isomerization is responsible for the red-shifted fluorescence in variants of the red fluorescent protein eqFP611.
J.Am.Chem.Soc., 130, 2008
3W26
DownloadVisualize
BU of 3w26 by Molmil
The high-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E146A mutant with xylotriose
Descriptor: Glycoside hydrolase family 10, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Han, X, Gao, J, Shang, N, Huang, C.-H, Ko, T.-P, Zhu, Z, Wiegel, J, Shao, W, Guo, R.-T.
Deposit date:2012-11-27
Release date:2013-04-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and functional analyses of catalytic domain of GH10 xylanase from Thermoanaerobacterium saccharolyticum JW/SL-YS485
Proteins, 81, 2013
3W24
DownloadVisualize
BU of 3w24 by Molmil
The high-resolution crystal structure of TsXylA, intracellular xylanase from Thermoanaerobacterium saccharolyticum JW/SL-YS485
Descriptor: Glycoside hydrolase family 10
Authors:Han, X, Gao, J, Shang, N, Huang, C.-H, Ko, T.-P, Zhu, Z, Wiegel, J, Shao, W, Guo, R.-T.
Deposit date:2012-11-27
Release date:2013-04-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural and functional analyses of catalytic domain of GH10 xylanase from Thermoanaerobacterium saccharolyticum JW/SL-YS485
Proteins, 81, 2013
2Y0F
DownloadVisualize
BU of 2y0f by Molmil
STRUCTURE OF GCPE (IspG) FROM THERMUS THERMOPHILUS HB27
Descriptor: 4-HYDROXY-3-METHYLBUT-2-EN-1-YL DIPHOSPHATE SYNTHASE, IRON/SULFUR CLUSTER
Authors:Rekittke, I, Nonaka, T, Wiesner, J, Demmer, U, Warkentin, E, Jomaa, H, Ermler, U.
Deposit date:2010-12-02
Release date:2011-01-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the E-1-Hydroxy-2-Methyl-But-2-Enyl-4-Diphosphate Synthase (Gcpe) from Thermus Thermophilus.
FEBS Lett., 585, 2011
2VVJ
DownloadVisualize
BU of 2vvj by Molmil
IrisFP fluorescent protein in its red form, cis conformation
Descriptor: Green to red photoconvertible GFP-like protein EosFP, SULFATE ION, SULFITE ION
Authors:Adam, V, Lelimousin, M, Boehme, S, Desfonds, G, Nienhaus, K, Field, M.J, Wiedenmann, J, McSweeney, S, Nienhaus, G.U, Bourgeois, D.
Deposit date:2008-06-09
Release date:2008-08-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Characterization of Irisfp, an Optical Highlighter Undergoing Multiple Photo-Induced Transformations.
Proc.Natl.Acad.Sci.USA, 105, 2008
3E5V
DownloadVisualize
BU of 3e5v by Molmil
Crystal Structure Analysis of eqFP611 Double Mutant T122R, N143S
Descriptor: Red fluorescent protein eqFP611
Authors:Nar, H, Nienhaus, K, Nienhaus, U, Wiedenmann, J.
Deposit date:2008-08-14
Release date:2008-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Trans-cis isomerization is responsible for the red-shifted fluorescence in variants of the red fluorescent protein eqFP611.
J.Am.Chem.Soc., 130, 2008
1ZUX
DownloadVisualize
BU of 1zux by Molmil
EosFP Fluorescent Protein- Green Form
Descriptor: green to red photoconvertible GPF-like protein EosFP
Authors:Nar, H, Nienhaus, K, Wiedenmann, J, Nienhaus, G.U.
Deposit date:2005-06-01
Release date:2005-06-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural basis for photo-induced protein cleavage and green-to-red conversion of fluorescent protein EosFP.
Proc.Natl.Acad.Sci.Usa, 102, 2005
2BTJ
DownloadVisualize
BU of 2btj by Molmil
Fluorescent Protein EosFP - red form
Descriptor: Green to red photoconvertible GFP-like protein EosFP
Authors:Nar, H, Nienhaus, K, Wiedenmann, J, Nienhaus, G.U.
Deposit date:2005-06-01
Release date:2005-06-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for Photo-Induced Protein Cleavage and Green-to-Red Conversion of Fluorescent Protein Eosfp.
Proc.Natl.Acad.Sci.USA, 102, 2005
2C9J
DownloadVisualize
BU of 2c9j by Molmil
Structure of the fluorescent protein cmFP512 at 1.35A from Cerianthus membranaceus
Descriptor: GREEN FLUORESCENT PROTEIN FP512
Authors:Renzi, F, Nienhaus, K, Wiedenmann, J, Vallone, B, Nienhaus, G.U.
Deposit date:2005-12-12
Release date:2006-10-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Exploring Chromophore-Protein Interactions in Fluorescent Protein Cmfp512 from Cerianthus Membranaceus: X-Ray Structure Analysis and Optical Spectroscopy.
Biochemistry, 45, 2006
2C9I
DownloadVisualize
BU of 2c9i by Molmil
Structure of the fluorescent protein asFP499 from Anemonia sulcata
Descriptor: GREEN FLUORESCENT PROTEIN ASFP499
Authors:Renzi, F, Nienhaus, K, Wiedenmann, J, Vallone, B, Nienhaus, G.U.
Deposit date:2005-12-12
Release date:2007-01-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Chromophore-Protein Interactions in the Anthozoan Green Fluorescent Protein Asfp499
Biophys.J., 91, 2006
3VST
DownloadVisualize
BU of 3vst by Molmil
The complex structure of XylC with Tris
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Xylosidase
Authors:Huang, C.H, Sun, Y, Ko, T.P, Ma, Y, Chen, C.C, Zheng, Y, Chan, H.C, Pang, X, Wiegel, J, Shao, W, Guo, R.T.
Deposit date:2012-05-09
Release date:2013-02-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The substrate/product-binding modes of a novel GH120 beta-xylosidase (XylC) from Thermoanaerobacterium saccharolyticum JW/SL-YS485
Biochem.J., 448, 2012
3VSV
DownloadVisualize
BU of 3vsv by Molmil
The complex structure of XylC with xylose
Descriptor: Xylosidase, alpha-D-xylopyranose, beta-D-xylopyranose
Authors:Huang, C.H, Sun, Y, Ko, T.P, Ma, Y, Chen, C.C, Zheng, Y, Chan, H.C, Pang, X, Wiegel, J, Shao, W, Guo, R.T.
Deposit date:2012-05-09
Release date:2013-02-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:The substrate/product-binding modes of a novel GH120 beta-xylosidase (XylC) from Thermoanaerobacterium saccharolyticum JW/SL-YS485
Biochem.J., 448, 2012
3VSU
DownloadVisualize
BU of 3vsu by Molmil
The complex structure of XylC with xylobiose
Descriptor: Xylosidase, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Huang, C.H, Sun, Y, Ko, T.P, Ma, Y, Chen, C.C, Zheng, Y, Chan, H.C, Pang, X, Wiegel, J, Shao, W, Guo, R.T.
Deposit date:2012-05-09
Release date:2013-02-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The substrate/product-binding modes of a novel GH120 beta-xylosidase (XylC) from Thermoanaerobacterium saccharolyticum JW/SL-YS485
Biochem.J., 448, 2012
1T1R
DownloadVisualize
BU of 1t1r by Molmil
Crystal Structure of the Reductoisomerase Complexed with a Bisphosphonate
Descriptor: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, SULFATE ION, [(ISOQUINOLIN-1-YLAMINO)-PHOSPHONO-METHYL]-PHOSPHONIC ACID
Authors:Yajima, S, Hara, K, Sanders, J.M, Yin, F, Ohsawa, K, Wiesner, J, Jomaa, H, Oldfield, E.
Deposit date:2004-04-17
Release date:2004-09-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystallographic Structures of Two Bisphosphonate:1-Deoxyxylulose-5-Phosphate Reductoisomerase Complexes
J.Am.Chem.Soc., 126, 2004
2MJI
DownloadVisualize
BU of 2mji by Molmil
HIFABP_Ketorolac_complex
Descriptor: (1R)-5-benzoyl-2,3-dihydro-1H-pyrrolizine-1-carboxylic acid, Fatty acid-binding protein, intestinal
Authors:Patil, R, Laguerre, A, Wielens, J, Headey, S, Williams, M, Mohanty, B, Porter, C, Scanlon, M.
Deposit date:2014-01-09
Release date:2014-10-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Characterization of two distinct modes of drug binding to human intestinal Fatty Acid binding protein.
Acs Chem.Biol., 9, 2014
8OR8
DownloadVisualize
BU of 8or8 by Molmil
Solution structure of the 8-17 DNAzyme in presence of Zn2+
Descriptor: 8-17 DNAzyme
Authors:Andralojc, W, Gdaniec, Z.
Deposit date:2023-04-13
Release date:2023-04-26
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:The 8-17 DNAzyme can operate in a single active structure regardless of metal ion cofactor.
Nat Commun, 15, 2024
3WG9
DownloadVisualize
BU of 3wg9 by Molmil
Crystal structure of RSP, a Rex-family repressor
Descriptor: Redox-sensing transcriptional repressor rex, SULFATE ION
Authors:Zheng, Y, Ko, T.-P, Guo, R.-T.
Deposit date:2013-08-03
Release date:2014-08-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Distinct structural features of Rex-family repressors to sense redox levels in anaerobes and aerobes.
J.Struct.Biol., 188, 2014
4IQB
DownloadVisualize
BU of 4iqb by Molmil
High Resolution Crystal Structure of C.elegans Thymidylate Synthase
Descriptor: SULFATE ION, Thymidylate synthase
Authors:Wilk, P, Dowiercial, A, Banaszak, K, Jarmula, A, Rypniewski, W, Rode, W.
Deposit date:2013-01-11
Release date:2014-01-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Crystal structures of nematode (parasitic T. spiralis and free living C. elegans), compared to mammalian, thymidylate synthases (TS). Molecular docking and molecular dynamics simulations in search for nematode-specific inhibitors of TS.
J. Mol. Graph. Model., 77, 2017
5BY6
DownloadVisualize
BU of 5by6 by Molmil
Crystal structure of Trichinella spiralis thymidylate synthase complexed with dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, GLYCEROL, ...
Authors:Dowiercial, A, Jarmula, A, Rypniewski, W, Fraczyk, T, Wilk, P, Rode, W.
Deposit date:2015-06-10
Release date:2015-06-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of nematode (parasitic T. spiralis and free living C. elegans), compared to mammalian, thymidylate synthases (TS). Molecular docking and molecular dynamics simulations in search for nematode-specific inhibitors of TS.
J. Mol. Graph. Model., 77, 2017
5NOO
DownloadVisualize
BU of 5noo by Molmil
Crystal Structure of C.elegans Thymidylate Synthase in Complex with dUMP and Tomudex
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, TOMUDEX, Thymidylate synthase
Authors:Wilk, P, Jarmula, A, Maj, P, Dowiercial, A, Banaszak, K, Rypniewski, W, Rode, W.
Deposit date:2017-04-12
Release date:2017-05-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures of nematode (parasitic T. spiralis and free living C. elegans), compared to mammalian, thymidylate synthases (TS). Molecular docking and molecular dynamics simulations in search for nematode-specific inhibitors of TS.
J. Mol. Graph. Model., 77, 2017

222926

건을2024-07-24부터공개중

PDB statisticsPDBj update infoContact PDBjnumon