Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1YFL
DownloadVisualize
BU of 1yfl by Molmil
T4Dam in Complex with Sinefungin and 16-mer Oligonucleotide Showing Semi-specific and Specific Contact and Flipped Base
Descriptor: 5'-D(P*TP*CP*AP*CP*AP*GP*GP*AP*TP*CP*CP*TP*GP*TP*GP*A)-3', DNA adenine methylase, SINEFUNGIN
Authors:Horton, J.R, Liebert, K, Hattman, S, Jeltsch, A, Cheng, X.
Deposit date:2005-01-03
Release date:2005-05-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Transition from Nonspecific to Specific DNA Interactions along the Substrate-Recognition Pathway of Dam Methyltransferase.
Cell(Cambridge,Mass.), 121, 2005
5BVN
DownloadVisualize
BU of 5bvn by Molmil
Fragment-based discovery of potent and selective DDR1/2 inhibitors
Descriptor: Epithelial discoidin domain-containing receptor 1, IODIDE ION, N-[5-({[(3-fluorophenyl)carbamoyl]amino}methyl)-2-methylphenyl]imidazo[1,2-a]pyridine-3-carboxamide
Authors:Murray, C, Berdini, V, Buck, I, Carr, M, Cleasby, A, Coyle, J, Curry, J, Day, J, Hearn, K, Iqbal, A, Lee, L, Martins, V, Mortenson, P, Munck, J, Page, L, Patel, S, Roomans, S, Kirsten, T, Saxty, G.
Deposit date:2015-06-05
Release date:2015-08-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Fragment-Based Discovery of Potent and Selective DDR1/2 Inhibitors.
Acs Med.Chem.Lett., 6, 2015
3ICJ
DownloadVisualize
BU of 3icj by Molmil
Crystal structure of an uncharacterized metal-dependent hydrolase from pyrococcus furiosus
Descriptor: ZINC ION, uncharacterized metal-dependent hydrolase
Authors:Bonanno, J.B, Patskovsky, Y, Freeman, J, Bain, K.T, Hu, S, Ozyurt, S, Wasserman, S, Sauder, J.M, Raushel, F.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-07-17
Release date:2009-07-28
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of an Uncharacterized Metal-Dependent Hydrolase from Pyrococcus Furiosus
To be Published
1RMZ
DownloadVisualize
BU of 1rmz by Molmil
Crystal structure of the catalytic domain of human MMP12 complexed with the inhibitor NNGH at 1.3 A resolution
Descriptor: CALCIUM ION, Macrophage metalloelastase, N-ISOBUTYL-N-[4-METHOXYPHENYLSULFONYL]GLYCYL HYDROXAMIC ACID, ...
Authors:Bertini, I, Calderone, V, Fragai, M, Luchinat, C, Mangani, S, Terni, B.
Deposit date:2003-11-28
Release date:2004-12-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Conformational variability of matrix metalloproteinases: beyond a single 3D structure.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1RJU
DownloadVisualize
BU of 1rju by Molmil
Crystal structure of a truncated form of yeast copper thionein
Descriptor: COPPER (I) ION, Metallothionein
Authors:Calderone, V, Dolderer, B, Hartmann, H.J, Echner, H, Luchinat, C, Del Bianco, C, Mangani, S, Weser, U.
Deposit date:2003-11-20
Release date:2004-12-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:The Crystal Structure of Yeast Copper Thionein: the solution of a long lasting Enigma.
Proc.Natl.Acad.Sci.USA, 102, 2005
3E03
DownloadVisualize
BU of 3e03 by Molmil
Crystal structure of a putative dehydrogenase from Xanthomonas campestris
Descriptor: CALCIUM ION, Short chain dehydrogenase
Authors:Sampathkumar, P, Wasserman, S, Rutter, M, Hu, S, Bain, K, Rodgers, L, Atwell, S, Sauder, J.M, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-07-30
Release date:2008-09-16
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Crystal structure of a putative dehydrogenase from Xanthomonas campestris
To be Published
3ED4
DownloadVisualize
BU of 3ed4 by Molmil
Crystal structure of putative arylsulfatase from escherichia coli
Descriptor: ARYLSULFATASE, GLYCEROL, SODIUM ION, ...
Authors:Patskovsky, Y, Ozyurt, S, Gilmore, M, Chang, S, Bain, K, Wasserman, S, Koss, J, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-09-02
Release date:2008-09-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Arylsulfatase from Escherichia Coli
To be Published
3EEZ
DownloadVisualize
BU of 3eez by Molmil
Crystal structure of a putative mandelate racemase/muconate lactonizing enzyme from Silicibacter pomeroyi
Descriptor: putative Mandelate racemase/muconate lactonizing enzyme
Authors:Bonanno, J.B, Rutter, M, Bain, K.T, Hu, S, Ozyurt, S, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-09-07
Release date:2008-09-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a putative mandelate racemase/muconate lactonizing enzyme from Silicibacter pomeroyi
To be Published
3EMU
DownloadVisualize
BU of 3emu by Molmil
Crystal structure of a leucine rich repeat and phosphatase domain containing protein from Entamoeba histolytica
Descriptor: SULFATE ION, leucine rich repeat and phosphatase domain containing protein
Authors:Bonanno, J.B, Gilmore, M, Bain, K.T, Hu, S, Ozyurt, S, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-09-25
Release date:2008-10-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a leucine rich repeat and phosphatase domain containing protein from Entamoeba histolytica
To be Published
3DOU
DownloadVisualize
BU of 3dou by Molmil
Crystal structure of methyltransferase involved in cell division from thermoplasma volcanicum gss1
Descriptor: Ribosomal RNA large subunit methyltransferase J, S-ADENOSYLMETHIONINE
Authors:Patskovsky, Y, Ozyurt, S, Dickey, M, Hu, S, Bain, K, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-07-06
Release date:2008-09-02
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal Structure of Methyltransferase Involved in Cell Division from Thermoplasma Volcanicum
To be Published
3N90
DownloadVisualize
BU of 3n90 by Molmil
The 1.7 Angstrom resolution crystal structure of AT2G44920, a pentapeptide repeat protein from Arabidopsis thaliana thylakoid lumen.
Descriptor: SULFATE ION, Thylakoid lumenal 15 kDa protein 1, chloroplastic
Authors:Ni, S, Mckgookey, M, Tinch, S.L, Jones, A.N, Jayaraman, S, Kennedy, M.A.
Deposit date:2010-05-28
Release date:2011-06-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The 1.7 Angstrom resolution crystal structure of AT2G44920, a pentapeptide repeat protein from Arabidopsis thaliana thylakoid lumen.
To be Published
1NXI
DownloadVisualize
BU of 1nxi by Molmil
Solution structure of Vibrio cholerae protein VC0424
Descriptor: conserved hypothetical protein VC0424
Authors:Ramelot, T.A, Ni, S, Goldsmith-Fischman, S, Cort, J.R, Honig, B, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2003-02-10
Release date:2003-07-01
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Solution structure of Vibrio cholerae protein VC0424: a variation of the ferredoxin-like fold.
Protein Sci., 12, 2003
1Z3J
DownloadVisualize
BU of 1z3j by Molmil
Solution Structure of MMP12 in the presence of N-isobutyl-N-4-methoxyphenylsulfonyl]glycyl hydroxamic acid (NNGH)
Descriptor: CALCIUM ION, Macrophage metalloelastase, N-ISOBUTYL-N-[4-METHOXYPHENYLSULFONYL]GLYCYL HYDROXAMIC ACID, ...
Authors:Bertini, I, Calderone, V, Cosenza, M, Fragai, M, Lee, Y.M, Luchinat, C, Mangani, S, Terni, B, Turano, P.
Deposit date:2005-03-13
Release date:2005-04-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Conformational variability of matrix metalloproteinases: Beyond a single 3D structure.
Proc.Natl.Acad.Sci.Usa, 102, 2005
3KGZ
DownloadVisualize
BU of 3kgz by Molmil
Crystal structure of a cupin 2 conserved barrel domain protein from Rhodopseudomonas palustris
Descriptor: Cupin 2 conserved barrel domain protein, MANGANESE (II) ION
Authors:Bonanno, J.B, Freeman, J, Bain, K.T, Do, J, Romero, R, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-10-29
Release date:2009-11-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of a cupin 2 conserved barrel domain protein from Rhodopseudomonas palustris
To be Published
3GG2
DownloadVisualize
BU of 3gg2 by Molmil
Crystal structure of UDP-glucose 6-dehydrogenase from Porphyromonas gingivalis bound to product UDP-glucuronate
Descriptor: Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family, URIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID
Authors:Bonanno, J.B, Freeman, J, Bain, K.T, Chang, S, Sampathkumar, P, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-02-27
Release date:2009-03-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of UDP-glucose 6-dehydrogenase from Porphyromonas gingivalis bound to product UDP-glucuronate
To be Published
7OWY
DownloadVisualize
BU of 7owy by Molmil
Crystal structure of human mitochondrial ferritin (hMTF) Fe(II)-loaded for 3 minutes showing a peroxide anion as bridging species of iron ions in the ferroxidase site
Descriptor: CHLORIDE ION, FE (II) ION, Ferritin, ...
Authors:Pozzi, C, Ciambellotti, S, Tassone, G, Turano, P, Mangani, S.
Deposit date:2021-06-21
Release date:2021-10-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Iron Binding in the Ferroxidase Site of Human Mitochondrial Ferritin.
Chemistry, 27, 2021
1QUN
DownloadVisualize
BU of 1qun by Molmil
X-RAY STRUCTURE OF THE FIMC-FIMH CHAPERONE ADHESIN COMPLEX FROM UROPATHOGENIC E.COLI
Descriptor: MANNOSE-SPECIFIC ADHESIN FIMH, PAPD-LIKE CHAPERONE FIMC
Authors:Choudhury, D, Thompson, A, Stojanoff, V, Langerman, S, Pinkner, J, Hultgren, S.J, Knight, S.
Deposit date:1999-07-01
Release date:1999-08-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:X-ray structure of the FimC-FimH chaperone-adhesin complex from uropathogenic Escherichia coli.
Science, 285, 1999
3H0U
DownloadVisualize
BU of 3h0u by Molmil
Crystal structure of a putative enoyl-CoA hydratase from Streptomyces avermitilis
Descriptor: DIMETHYL SULFOXIDE, Putative enoyl-CoA hydratase, SODIUM ION
Authors:Bonanno, J.B, Freeman, J, Bain, K.T, Miller, S, Romero, R, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-04-10
Release date:2009-04-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of a putative enoyl-CoA hydratase from Streptomyces avermitilis
To be Published
3LOS
DownloadVisualize
BU of 3los by Molmil
Atomic Model of Mm-cpn in the Closed State
Descriptor: Chaperonin
Authors:Zhang, J, Baker, M.L, Schroeder, G, Douglas, N.R, Reissmann, S, Jakana, J, Dougherty, M, Fu, C.J, Levitt, M, Ludtke, S.J, Frydman, J, Chiu, W.
Deposit date:2010-02-04
Release date:2010-03-16
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Mechanism of folding chamber closure in a group II chaperonin
Nature, 463, 2010
3GKB
DownloadVisualize
BU of 3gkb by Molmil
Crystal structure of a putative enoyl-CoA hydratase from Streptomyces avermitilis
Descriptor: GLYCEROL, Putative enoyl-CoA hydratase
Authors:Bonanno, J.B, Freeman, J, Bain, K.T, Chang, S, Romero, R, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-03-10
Release date:2009-03-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a putative enoyl-CoA hydratase from Streptomyces avermitilis
To be Published
7RLH
DownloadVisualize
BU of 7rlh by Molmil
Cryo-EM structure of human p97-D592N mutant bound to ATPgS.
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
Authors:Caffrey, B, Zhu, X, Berezuk, A, Tuttle, K, Chittori, S, Subramaniam, S.
Deposit date:2021-07-23
Release date:2021-09-22
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3 Å)
Cite:AAA+ ATPase p97/VCP mutants and inhibitor binding disrupt inter-domain coupling and subsequent allosteric activation.
J.Biol.Chem., 297, 2021
7RLG
DownloadVisualize
BU of 7rlg by Molmil
Cryo-EM structure of human p97-D592N mutant bound to ADP.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
Authors:Caffrey, B, Zhu, X, Berezuk, A, Tuttle, K, Chittori, S, Subramaniam, S.
Deposit date:2021-07-23
Release date:2021-09-22
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:AAA+ ATPase p97/VCP mutants and inhibitor binding disrupt inter-domain coupling and subsequent allosteric activation.
J.Biol.Chem., 297, 2021
7RLA
DownloadVisualize
BU of 7rla by Molmil
Cryo-EM structure of human p97-R191Q mutant bound to ATPgS.
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
Authors:Caffrey, B, Zhu, X, Berezuk, A, Tuttle, K, Chittori, S, Subramaniam, S.
Deposit date:2021-07-23
Release date:2021-09-22
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:AAA+ ATPase p97/VCP mutants and inhibitor binding disrupt inter-domain coupling and subsequent allosteric activation.
J.Biol.Chem., 297, 2021
7RL6
DownloadVisualize
BU of 7rl6 by Molmil
Cryo-EM structure of human p97-R155H mutant bound to ADP.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
Authors:Caffrey, B, Zhu, X, Berezuk, A, Tuttle, K, Chittori, S, Subramaniam, S.
Deposit date:2021-07-23
Release date:2021-09-22
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:AAA+ ATPase p97/VCP mutants and inhibitor binding disrupt inter-domain coupling and subsequent allosteric activation.
J.Biol.Chem., 297, 2021
7RLC
DownloadVisualize
BU of 7rlc by Molmil
Cryo-EM structure of human p97-A232E mutant bound to ATPgS.
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
Authors:Caffrey, B, Zhu, X, Berezuk, A, Tuttle, K, Chittori, S, Subramaniam, S.
Deposit date:2021-07-23
Release date:2021-09-22
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:AAA+ ATPase p97/VCP mutants and inhibitor binding disrupt inter-domain coupling and subsequent allosteric activation.
J.Biol.Chem., 297, 2021

221716

건을2024-06-26부터공개중

PDB statisticsPDBj update infoContact PDBjnumon