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8F6V
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BU of 8f6v by Molmil
Crystal Structure of Nanobody VHH108 Bound to Its Antigen PA14 Cif
Descriptor: CFTR inhibitory factor, Nanobody VHH108
Authors:Simard, A.R, Madden, D.R.
Deposit date:2022-11-17
Release date:2024-03-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Nanobody VHH113 Bound to Its Antigen PA14 Cif
To Be Published
4J0Q
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BU of 4j0q by Molmil
Crystal structure of Pseudomonas putida elongation factor Tu (EF-Tu)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Elongation factor Tu-A, ...
Authors:Scotti, J.S, McDonough, M.A, Schofield, C.J.
Deposit date:2013-01-31
Release date:2014-02-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.294 Å)
Cite:Human oxygen sensing may have origins in prokaryotic elongation factor Tu prolyl-hydroxylation
Proc.Natl.Acad.Sci.USA, 111, 2014
4J25
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BU of 4j25 by Molmil
Crystal structure of a Pseudomonas putida prolyl-4-hydroxylase (P4H)
Descriptor: MANGANESE (II) ION, N-OXALYLGLYCINE, Putative uncharacterized protein
Authors:Scotti, J.S, McDonough, M.A, Schofield, C.J.
Deposit date:2013-02-04
Release date:2014-02-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Human oxygen sensing may have origins in prokaryotic elongation factor Tu prolyl-hydroxylation
Proc.Natl.Acad.Sci.USA, 111, 2014
2Z7L
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BU of 2z7l by Molmil
Unphosphorylated Mitogen Activated Protein Kinase ERK2 in Complex with (4-{[5-Carbamoyl-4-(3-Methylanilino)Pyrimidin 2-Yl]Amino}Phenyl)Acetic Acid
Descriptor: BETA-MERCAPTOETHANOL, Mitogen-activated protein kinase 1, SULFATE ION, ...
Authors:Katayama, N, Kurihara, H.
Deposit date:2007-08-27
Release date:2008-08-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Identification of a key element for hydrogen-bonding patterns between protein kinases and their inhibitors
Proteins, 73, 2008
3VNU
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BU of 3vnu by Molmil
Complex structure of viral RNA polymerase I
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Elongation factor Ts, ...
Authors:Takeshita, D, Tomita, K.
Deposit date:2012-01-18
Release date:2012-08-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Mechanism for template-independent terminal adenylation activity of Q beta replicase
Structure, 20, 2012
3VNV
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BU of 3vnv by Molmil
Complex structure of viral RNA polymerase II
Descriptor: 3'-DEOXY-CYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, Elongation factor Ts, ...
Authors:Takeshita, D, Tomita, K.
Deposit date:2012-01-18
Release date:2012-08-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:Mechanism for template-independent terminal adenylation activity of Q beta replicase
Structure, 20, 2012
2Z8C
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BU of 2z8c by Molmil
Phosphorylated insulin receptor tyrosine kinase in complex with (4-{[5-carbamoyl-4-(3-methylanilino)pyrimidin-2-yl]amino}phenyl)acetic acid
Descriptor: 6-mer peptide from Insulin receptor substrate 1, Insulin receptor, [4-({5-(AMINOCARBONYL)-4-[(3-METHYLPHENYL)AMINO]PYRIMIDIN-2-YL}AMINO)PHENYL]ACETIC ACID
Authors:Katayama, N, Kurihara, H.
Deposit date:2007-09-05
Release date:2008-08-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Identification of a key element for hydrogen-bonding patterns between protein kinases and their inhibitors.
Proteins, 73, 2008
1QBS
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BU of 1qbs by Molmil
HIV-1 PROTEASE INHIBITORS WIIH LOW NANOMOLAR POTENCY
Descriptor: HIV-1 PROTEASE, [4-R-(-4-ALPHA,5-ALPHA,6-BETA,7-BETA)]-HEXAHYDRO-5,6-BIS(HYDROXY)-[1,3-BIS([4-HYDROXYMETHYL-PHENYL]METHYL)-4,7-BIS(PHENYLMETHYL)]-2H-1,3-DIAZEPINONE
Authors:Ala, P, Chang, C.-H.
Deposit date:1997-04-25
Release date:1997-10-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Cyclic HIV protease inhibitors: synthesis, conformational analysis, P2/P2' structure-activity relationship, and molecular recognition of cyclic ureas.
J.Med.Chem., 39, 1996
2ZTB
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BU of 2ztb by Molmil
Crystal structure of the parasporin-2 Bacillus thuringiensis toxin that recognizes cancer cells
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Crystal protein, ...
Authors:Akiba, T.
Deposit date:2008-09-29
Release date:2009-01-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Crystal structure of the parasporin-2 Bacillus thuringiensis toxin that recognizes cancer cells
J.Mol.Biol., 386, 2009
5IBW
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BU of 5ibw by Molmil
Complex of MlcC bound to the tandem IQ motif of MyoC
Descriptor: Calcium-binding EF-hand domain-containing protein, Myosin IC heavy chain, SODIUM ION
Authors:Langelaan, D.N, Smith, S.P.
Deposit date:2016-02-22
Release date:2016-08-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the Single-lobe Myosin Light Chain C in Complex with the Light Chain-binding Domains of Myosin-1C Provides Insights into Divergent IQ Motif Recognition.
J.Biol.Chem., 291, 2016
3VKN
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BU of 3vkn by Molmil
Galectin-8 N-terminal domain in free form
Descriptor: CHLORIDE ION, Galectin-8
Authors:Kamitori, S, Yoshida, H.
Deposit date:2011-11-18
Release date:2012-09-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:X-ray structure of a protease-resistant mutant form of human galectin-8 with two carbohydrate recognition domains
Febs J., 279, 2012
3VUO
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BU of 3vuo by Molmil
Crystal structure of nontoxic nonhemagglutinin subcomponent (NTNHA) from clostridium botulinum serotype D strain 4947
Descriptor: NTNHA
Authors:Sagane, Y, Miyashita, S.-I, Miyata, K, Matsumoto, T, Inui, K, Hayashi, S, Suzuki, T, Hasegawa, K, Yajima, S, Yamano, A, Niwa, K, Watanabe, T.
Deposit date:2012-07-03
Release date:2012-09-19
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Small-angle X-ray scattering reveals structural dynamics of the botulinum neurotoxin associating protein, nontoxic nonhemagglutinin
Biochem.Biophys.Res.Commun., 425, 2012
3VKL
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BU of 3vkl by Molmil
Protease-resistant mutant form of human Galectin-8 in complex with two lactose molecules
Descriptor: 1,2-ETHANEDIOL, Galectin-8, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Kamitori, S, Yoshida, H.
Deposit date:2011-11-18
Release date:2012-09-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:X-ray structure of a protease-resistant mutant form of human galectin-8 with two carbohydrate recognition domains
Febs J., 279, 2012
3VKO
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BU of 3vko by Molmil
Galectin-8 N-terminal domain in complex with sialyllactosamine
Descriptor: CHLORIDE ION, Galectin-8, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Kamitori, S, Yoshida, H.
Deposit date:2011-11-18
Release date:2012-09-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:X-ray structure of a protease-resistant mutant form of human galectin-8 with two carbohydrate recognition domains
Febs J., 279, 2012
3WJV
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BU of 3wjv by Molmil
Crystal structure of the L68E variant of mLolB
Descriptor: Outer-membrane lipoprotein LolB, SULFATE ION
Authors:Takeda, K, Tokuda, H, Miki, K.
Deposit date:2013-10-16
Release date:2014-03-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Roles of the Protruding Loop of Factor B Essential for the Localization of Lipoproteins (LolB) in the Anchoring of Bacterial Triacylated Proteins to the Outer Membran
J.Biol.Chem., 289, 2014
4GJJ
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BU of 4gjj by Molmil
Crystal structure of Pseudomonas stutzeri L-rhamnose isomerase mutant H101N in complex with D-allopyranose
Descriptor: D-ALLOSE, L-rhamnose isomerase, MANGANESE (II) ION, ...
Authors:Yoshida, H, Kamitori, S.
Deposit date:2012-08-09
Release date:2012-12-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Structure of l-rhamnose isomerase in complex with l-rhamnopyranose demonstrates the sugar-ring opening mechanism and the role of a substrate sub-binding site.
FEBS Open Bio, 3, 2013
4GJI
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BU of 4gji by Molmil
Crystal structure of Pseudomonas stutzeri L-rhamnose isomerase mutant H101N in complex with L-rhamnopyranose
Descriptor: L-RHAMNOSE, L-rhamnose isomerase, MANGANESE (II) ION, ...
Authors:Yoshida, H, Kamitori, S.
Deposit date:2012-08-09
Release date:2012-12-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of l-rhamnose isomerase in complex with l-rhamnopyranose demonstrates the sugar-ring opening mechanism and the role of a substrate sub-binding site.
FEBS Open Bio, 3, 2013
4HQQ
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BU of 4hqq by Molmil
Crystal structure of RV144-elicited antibody CH58
Descriptor: CH58 Fab heavy chain, CH58 Fab light chain
Authors:McLellan, J.S, Haynes, B.F, Kwong, P.D.
Deposit date:2012-10-25
Release date:2013-02-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Vaccine Induction of Antibodies against a Structurally Heterogeneous Site of Immune Pressure within HIV-1 Envelope Protein Variable Regions 1 and 2.
Immunity, 38, 2013
9C66
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BU of 9c66 by Molmil
Structure of the Mena EVH1 domain bound to the polyproline segment of PTP1B
Descriptor: 1,2-ETHANEDIOL, Protein enabled homolog, SULFATE ION, ...
Authors:LaComb, L, Fedorov, E, Bonanno, J.B, Almo, S.C, Ghosh, A.
Deposit date:2024-06-07
Release date:2024-08-28
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Insights into the Interaction Landscape of the EVH1 Domain of Mena.
Biochemistry, 63, 2024
8GJR
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BU of 8gjr by Molmil
Crystal Structure of Nanobody VHH114 Bound to Its Antigen PA14 Cif
Descriptor: CFTR inhibitory factor, CITRATE ANION, Nanobody VHH114
Authors:Simard, A.R, Madden, D.R.
Deposit date:2023-03-16
Release date:2024-06-26
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of Nanobody VHH114 Bound to Its Antigen PA14 Cif
To Be Published
1HVH
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BU of 1hvh by Molmil
NONPEPTIDE CYCLIC CYANOGUANIDINES AS HIV PROTEASE INHIBITORS
Descriptor: HIV-1 PROTEASE, {[4-R(-4-ALPHA,5-ALPHA,6-BETA,7-BETA)]-HEXAHYDRO-5,6-BIS(HYDROXY)-1,3-BIS(4-HYDROXYMETHYL)METHYL]-4,7-BIS(PHENYLMETHYL) -2H-1,3-DIAZEPIN-2-YLIDENE]CYANAMIDE}
Authors:Chang, C.-H.
Deposit date:1997-12-13
Release date:1998-12-30
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Nonpeptide cyclic cyanoguanidines as HIV-1 protease inhibitors: synthesis, structure-activity relationships, and X-ray crystal structure studies.
J.Med.Chem., 41, 1998
1HVR
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BU of 1hvr by Molmil
RATIONAL DESIGN OF POTENT, BIOAVAILABLE, NONPEPTIDE CYCLIC UREAS AS HIV PROTEASE INHIBITORS
Descriptor: HIV-1 PROTEASE, [4R-(4ALPHA,5ALPHA,6BETA,7BETA)]-HEXAHYDRO-5,6-DIHYDROXY-1,3-BIS[2-NAPHTHYL-METHYL]-4,7-BIS(PHENYLMETHYL)-2H-1,3-DIAZEPIN-2-ONE
Authors:Chang, C.-H.
Deposit date:1994-02-14
Release date:1995-01-26
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Rational design of potent, bioavailable, nonpeptide cyclic ureas as HIV protease inhibitors.
Science, 263, 1994
2ZOG
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BU of 2zog by Molmil
Crystal structure of mouse carnosinase CN2 complexed with ZN and bestatin
Descriptor: 2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID, Cytosolic non-specific dipeptidase, ZINC ION
Authors:Unno, H, Yamashita, T, Okumura, N, Kusunoki, M.
Deposit date:2008-05-14
Release date:2008-06-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for substrate recognition and hydrolysis by mouse carnosinase CN2.
J.Biol.Chem., 283, 2008
2ZOF
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BU of 2zof by Molmil
Crystal structure of mouse carnosinase CN2 complexed with MN and bestatin
Descriptor: 2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID, Cytosolic non-specific dipeptidase, MANGANESE (II) ION
Authors:Unno, H, Yamashita, T, Okumura, N, Kusunoki, M.
Deposit date:2008-05-14
Release date:2008-06-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for substrate recognition and hydrolysis by mouse carnosinase CN2.
J.Biol.Chem., 283, 2008
7COV
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BU of 7cov by Molmil
Potato D-enzyme, native (substrate free)
Descriptor: 4-alpha-glucanotransferase, chloroplastic/amyloplastic, CALCIUM ION, ...
Authors:Unno, H, Imamura, K.
Deposit date:2020-08-05
Release date:2020-08-26
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural analysis and reaction mechanism of the disproportionating enzyme (D-enzyme) from potato.
Protein Sci., 29, 2020

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