Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2JJB
DownloadVisualize
BU of 2jjb by Molmil
Family 37 trehalase from Escherichia coli in complex with casuarine-6- O-alpha-glucopyranose
Descriptor: 1,2-ETHANEDIOL, CASUARINE, PERIPLASMIC TREHALASE, ...
Authors:Gloster, T.M, Roberts, S, Davies, G.J, Cardona, F, Parmeggiani, C, Bonaccini, C, Gratteri, P, Sim, L, Rose, D.R, Goti, A.
Deposit date:2008-03-28
Release date:2009-01-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Total Syntheses of Casuarine and its 6-O-Alpha-Glucoside: Complementary Inhibition Towards Glycoside Hydrolases of the Gh31 and Gh37 Families.
Chemistry, 15, 2009
6F93
DownloadVisualize
BU of 6f93 by Molmil
Helicobacter pylori serine hydroxymethyl transferase in apo form
Descriptor: Serine hydroxymethyltransferase
Authors:Sodolescu, A, Dian, C, Terradot, L, Bouzhir-Sima, L, Lestini, R, Myllykallio, H, Skouloubris, S, Liebl, U.
Deposit date:2017-12-13
Release date:2018-12-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and functional insight into serine hydroxymethyltransferase from Helicobacter pylori.
PLoS ONE, 13, 2018
2V64
DownloadVisualize
BU of 2v64 by Molmil
Crystallographic structure of the conformational dimer of the Spindle Assembly Checkpoint protein Mad2.
Descriptor: MBP1, MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2A
Authors:Mapelli, M, Massimiliano, L, Santaguida, S, Musacchio, A.
Deposit date:2007-07-13
Release date:2007-11-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The MAD2 Conformational Dimer: Structure and Implications for the Spindle Assembly Checkpoint
Cell(Cambridge,Mass.), 131, 2007
3IY9
DownloadVisualize
BU of 3iy9 by Molmil
Leishmania Tarentolae Mitochondrial Large Ribosomal Subunit Model
Descriptor: 39S ribosomal protein L11, mitochondrial, 39S ribosomal protein L16, ...
Authors:Sharma, M.R, Booth, T.M, Simpson, L, Maslov, D.A, Agrawal, R.K.
Deposit date:2009-04-20
Release date:2009-07-07
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (14.1 Å)
Cite:Structure of a mitochondrial ribosome with minimal RNA
Proc.Natl.Acad.Sci.USA, 106, 2009
3IY8
DownloadVisualize
BU of 3iy8 by Molmil
Leishmania tarentolae Mitonchondrial Ribosome small subunit
Descriptor: 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S15, ...
Authors:Sharma, M.R, Booth, T.M, Simpson, L, Maslov, D.A, Agrawal, R.K.
Deposit date:2009-04-16
Release date:2009-07-07
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (14.1 Å)
Cite:Structure of a mitochondrial ribosome with minimal RNA
Proc.Natl.Acad.Sci.USA, 106, 2009
1UNL
DownloadVisualize
BU of 1unl by Molmil
Structural mechanism for the inhibition of CD5-p25 from the roscovitine, aloisine and indirubin.
Descriptor: CYCLIN-DEPENDENT KINASE 5, CYCLIN-DEPENDENT KINASE 5 ACTIVATOR 1, R-ROSCOVITINE
Authors:Mapelli, M, Crovace, C, Massimiliano, L, Musacchio, A.
Deposit date:2003-09-10
Release date:2004-11-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mechanism of Cdk5/P25 Binding by Cdk Inhibitors
J.Med.Chem., 48, 2005
1UNG
DownloadVisualize
BU of 1ung by Molmil
Structural mechanism for the inhibition of CDK5-p25 by roscovitine, aloisine and indirubin.
Descriptor: 6-PHENYL[5H]PYRROLO[2,3-B]PYRAZINE, CELL DIVISION PROTEIN KINASE 5, CYCLIN-DEPENDENT KINASE 5 ACTIVATOR 1
Authors:Mapelli, M, Crovace, C, Massimiliano, L, Musacchio, A.
Deposit date:2003-09-10
Release date:2004-11-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mechanism of Cdk5/P25 Binding by Cdk Inhibitors
J.Med.Chem., 48, 2005
1UNH
DownloadVisualize
BU of 1unh by Molmil
Structural mechanism for the inhibition of CDK5-p25 by roscovitine, aloisine and indirubin.
Descriptor: (Z)-1H,1'H-[2,3']BIINDOLYLIDENE-3,2'-DIONE-3-OXIME, CYCLIN-DEPENDENT KINASE 5, CYCLIN-DEPENDENT KINASE 5 ACTIVATOR 1
Authors:Mapelli, M, Crovace, C, Massimiliano, L, Musacchio, A.
Deposit date:2003-09-10
Release date:2004-11-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Mechanism of Cdk5/P25 Binding by Cdk Inhibitors
J.Med.Chem., 48, 2005
1VYH
DownloadVisualize
BU of 1vyh by Molmil
PAF-AH Holoenzyme: Lis1/Alfa2
Descriptor: PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB ALPHA SUBUNIT, PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB BETA SUBUNIT
Authors:Tarricone, C, Perrina, F, Monzani, S, Massimiliano, L, Knapp, S, Tsai, L.-H, Derewenda, Z.S, Musacchio, A.
Deposit date:2004-04-30
Release date:2005-05-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Coupling Paf Signaling to Dynein Regulation: Structure of Lis1 in Complex with Paf-Acetylhydrolase.
Neuron, 44, 2004
2JW4
DownloadVisualize
BU of 2jw4 by Molmil
NMR solution structure of the N-terminal SH3 domain of human Nckalpha
Descriptor: Cytoplasmic protein NCK1
Authors:Santiveri, C.M, Borroto, A, Simon, L, Rico, M, Ortiz, A.R, Alarcon, B, Jimenez, M.
Deposit date:2007-10-05
Release date:2008-08-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Interaction between the N-terminal SH3 domain of Nckalpha and CD3epsilon-derived peptides: Non-canonical and canonical recognition motifs
BIOCHEM.BIOPHYS.ACTA PROTEINS & PROTEOMICS, 1794, 2009
5WD7
DownloadVisualize
BU of 5wd7 by Molmil
Structure of a bacterial polysialyltransferase in complex with fondaparinux
Descriptor: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-3,6-di-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-methyl 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranoside, SULFATE ION, SiaD
Authors:Worrall, L.J, Lizak, C, Strynadka, N.C.J.
Deposit date:2017-07-04
Release date:2017-08-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:X-ray crystallographic structure of a bacterial polysialyltransferase provides insight into the biosynthesis of capsular polysialic acid.
Sci Rep, 7, 2017
5WCN
DownloadVisualize
BU of 5wcn by Molmil
Structure of a bacterial polysialyltransferase in complex with CDP
Descriptor: CYTIDINE-5'-DIPHOSPHATE, SULFATE ION, SiaD
Authors:Worrall, L.J, Lizak, C, Strynadka, N.C.J.
Deposit date:2017-06-30
Release date:2017-08-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:X-ray crystallographic structure of a bacterial polysialyltransferase provides insight into the biosynthesis of capsular polysialic acid.
Sci Rep, 7, 2017
9B42
DownloadVisualize
BU of 9b42 by Molmil
Pseudomonas phage Pa193 neck and extended tail (collar, gateway, tail tube, and sheath proteins)
Descriptor: gp29 Collar, gp30 Gateway, gp32 Sheath, ...
Authors:Iglesias, S.M, Cingolani, G.
Deposit date:2024-03-20
Release date:2024-10-16
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM analysis of Pseudomonas phage Pa193 structural components.
Commun Biol, 7, 2024
9B41
DownloadVisualize
BU of 9b41 by Molmil
Pseudomonas phage Pa193 Neck (portal and head-to-tail proteins)
Descriptor: gp19 Portal, gp28 Head-to-tail protein
Authors:Iglesias, S.M, Cingolani, G.
Deposit date:2024-03-20
Release date:2024-10-16
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM analysis of Pseudomonas phage Pa193 structural components.
Commun Biol, 7, 2024
9B45
DownloadVisualize
BU of 9b45 by Molmil
Pseudomonas phage Pa193 baseplate complex and tail fiber
Descriptor: gp34 helical bundle, gp35 Sheath initiator, gp37 Baseplate tube, ...
Authors:Iglesias, S.M, Cingolani, G.
Deposit date:2024-03-20
Release date:2024-10-16
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM analysis of Pseudomonas phage Pa193 structural components.
Commun Biol, 7, 2024
9B40
DownloadVisualize
BU of 9b40 by Molmil
Pseudomonas phage Pa193 5-fold vertex (capsid, decorating, and scaffolding proteins)
Descriptor: gp24 Scaffolding protein, gp25 Decorating protein, gp26 Major capsid
Authors:Iglesias, S.M, Cingolani, G.
Deposit date:2024-03-20
Release date:2024-10-16
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM analysis of Pseudomonas phage Pa193 structural components.
Commun Biol, 7, 2024
8TDH
DownloadVisualize
BU of 8tdh by Molmil
Structure of trehalose bound Alistipes sp. Glucoside-3-dehydrogenase AL3
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Predicted dehydrogenases and related proteins, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
Authors:Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J.
Deposit date:2023-07-03
Release date:2024-06-19
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:An alternative broad-specificity pathway for glycan breakdown in bacteria.
Nature, 631, 2024
8TDA
DownloadVisualize
BU of 8tda by Molmil
Structure of Bacteroides thetaiotaomicron 3-Keto-2-hydroxy-glucal-hydratase BT2
Descriptor: POTASSIUM ION, Probable secreted glycosyl hydrolase
Authors:Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J.
Deposit date:2023-07-02
Release date:2024-06-12
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:An alternative broad-specificity pathway for glycan breakdown in bacteria.
Nature, 631, 2024
8TDE
DownloadVisualize
BU of 8tde by Molmil
Structure of glucose bound Bacteroides thetaiotaomicron 3-Keto-2-hydroxy-glucal-hydratase BT2
Descriptor: POTASSIUM ION, Probable secreted glycosyl hydrolase, alpha-D-glucopyranose
Authors:Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J.
Deposit date:2023-07-02
Release date:2024-06-12
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:An alternative broad-specificity pathway for glycan breakdown in bacteria.
Nature, 631, 2024
8TDF
DownloadVisualize
BU of 8tdf by Molmil
Structure of Alistipes sp. Glucoside-3-dehydrogenase AL3
Descriptor: Dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J.
Deposit date:2023-07-02
Release date:2024-06-12
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:An alternative broad-specificity pathway for glycan breakdown in bacteria.
Nature, 631, 2024
8TDI
DownloadVisualize
BU of 8tdi by Molmil
Structure of P2B11 Glucuronide-3-dehydrogenase
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, P2B11 Glucuronide-3-dehydrogenase, ...
Authors:Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J.
Deposit date:2023-07-03
Release date:2024-06-12
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:An alternative broad-specificity pathway for glycan breakdown in bacteria.
Nature, 631, 2024
8TCD
DownloadVisualize
BU of 8tcd by Molmil
Structure of Alistipes sp. 3-Keto-beta-glucopyranoside-1,2-Lyase AL1
Descriptor: ACETATE ION, COBALT (II) ION, GLYCEROL, ...
Authors:Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J.
Deposit date:2023-06-30
Release date:2024-06-12
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:An alternative broad-specificity pathway for glycan breakdown in bacteria.
Nature, 631, 2024
8TCS
DownloadVisualize
BU of 8tcs by Molmil
Structure of trehalose bound Alistipes sp. 3-Keto-beta-glucopyranoside-1,2-Lyase AL1
Descriptor: ACETATE ION, COBALT (II) ION, Xylose isomerase-like TIM barrel domain-containing protein, ...
Authors:Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J.
Deposit date:2023-07-02
Release date:2024-06-19
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:An alternative broad-specificity pathway for glycan breakdown in bacteria.
Nature, 631, 2024
8TCT
DownloadVisualize
BU of 8tct by Molmil
Structure of 3K-GlcH bound Bacteroides thetaiotaomicron 3-Keto-beta-glucopyranoside-1,2-Lyase BT1
Descriptor: 1,5-anhydro-D-ribo-hex-3-ulose, COBALT (II) ION, PHOSPHATE ION, ...
Authors:Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J.
Deposit date:2023-07-02
Release date:2024-06-12
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:An alternative broad-specificity pathway for glycan breakdown in bacteria.
Nature, 631, 2024
8TCR
DownloadVisualize
BU of 8tcr by Molmil
Structure of glucose bound Alistipes sp. 3-Keto-beta-glucopyranoside-1,2-Lyase AL1
Descriptor: COBALT (II) ION, MALONATE ION, Sugar phosphate isomerase, ...
Authors:Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J.
Deposit date:2023-07-02
Release date:2024-06-12
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:An alternative broad-specificity pathway for glycan breakdown in bacteria.
Nature, 631, 2024

226707

건을2024-10-30부터공개중

PDB statisticsPDBj update infoContact PDBjnumon