Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4WNX
DownloadVisualize
BU of 4wnx by Molmil
Netrin 4 lacking the C-terminal Domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:McDougall, M, Patel, T, Reuten, R, Meier, M, Koch, M, Stetefeld, J.
Deposit date:2014-10-14
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.723 Å)
Cite:Structural decoding of netrin-4 reveals a regulatory function towards mature basement membranes.
Nat Commun, 7, 2016
4Z69
DownloadVisualize
BU of 4z69 by Molmil
Human serum albumin complexed with palmitic acid and diclofenac
Descriptor: 2-[2,6-DICHLOROPHENYL)AMINO]BENZENEACETIC ACID, PALMITIC ACID, PENTADECANOIC ACID, ...
Authors:Zhang, Y, Yang, F.
Deposit date:2015-04-04
Release date:2016-01-27
Method:X-RAY DIFFRACTION (2.187 Å)
Cite:Structural basis of non-steroidal anti-inflammatory drug diclofenac binding to human serum albumin.
Chem.Biol.Drug Des., 86, 2015
2LW6
DownloadVisualize
BU of 2lw6 by Molmil
Solution structure of an avirulence protein AvrPiz-t from pathogen Magnaportheoryzae
Descriptor: AvrPiz-t protein
Authors:Zhang, Z.-M, Zhang, X, Zhou, Z, Hu, H, Liu, M, Zhou, B, Zhou, J.
Deposit date:2012-07-23
Release date:2012-09-12
Last modified:2013-03-13
Method:SOLUTION NMR
Cite:Solution structure of the Magnaporthe oryzae avirulence protein AvrPiz-t.
J.Biomol.Nmr, 55, 2013
3JB7
DownloadVisualize
BU of 3jb7 by Molmil
In situ structures of the segmented genome and RNA polymerase complex inside a dsRNA virus
Descriptor: CPV RNA-dependent RNA polymerase, CYTIDINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Zhang, X, Ding, K, Yu, X.K, Chang, W, Sun, J.C, Zhou, Z.H.
Deposit date:2015-08-03
Release date:2015-10-28
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4 Å)
Cite:In situ structures of the segmented genome and RNA polymerase complex inside a dsRNA virus.
Nature, 527, 2015
2JNH
DownloadVisualize
BU of 2jnh by Molmil
Solution Structure of the UBA Domain from Cbl-b
Descriptor: E3 ubiquitin-protein ligase CBL-B
Authors:Zhou, C, Zhou, Z, Lin, D, Hu, H.
Deposit date:2007-01-24
Release date:2008-02-05
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Differential ubiquitin binding of the UBA domains from human c-Cbl and Cbl-b: NMR structural and biochemical insights
Protein Sci., 17, 2008
5X0W
DownloadVisualize
BU of 5x0w by Molmil
Molecular mechanism for the binding between Sharpin and HOIP
Descriptor: E3 ubiquitin-protein ligase RNF31, Sharpin
Authors:Liu, J, Li, F, Cheng, X, Pan, L.
Deposit date:2017-01-23
Release date:2017-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Insights into SHARPIN-Mediated Activation of HOIP for the Linear Ubiquitin Chain Assembly
Cell Rep, 21, 2017
5YDR
DownloadVisualize
BU of 5ydr by Molmil
Structure of DNMT1 RFTS domain in complex with ubiquitin
Descriptor: DNA (cytosine-5)-methyltransferase 1, PHOSPHATE ION, Polyubiquitin-B, ...
Authors:Qian, C.
Deposit date:2017-09-14
Release date:2018-02-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:Structural and mechanistic insights into UHRF1-mediated DNMT1 activation in the maintenance DNA methylation.
Nucleic Acids Res., 46, 2018
5WQ4
DownloadVisualize
BU of 5wq4 by Molmil
Crystal structure of OPTN and linear diubiquitin complex
Descriptor: Optineurin, ubiquitin
Authors:Li, F, Pan, L.
Deposit date:2016-11-23
Release date:2017-12-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural insights into the ubiquitin recognition by OPTN (optineurin) and its regulation by TBK1-mediated phosphorylation.
Autophagy, 14, 2018
7EP2
DownloadVisualize
BU of 7ep2 by Molmil
Crystal structure of ZYG11B bound to GGFN degron
Descriptor: Protein zyg-11 homolog B
Authors:Yan, X, Li, Y.
Deposit date:2021-04-26
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Molecular basis for recognition of Gly/N-degrons by CRL2 ZYG11B and CRL2 ZER1 .
Mol.Cell, 81, 2021
7EP0
DownloadVisualize
BU of 7ep0 by Molmil
Crystal structure of ZYG11B bound to GSTE degron
Descriptor: Protein zyg-11 homolog B, sodium 3,3'-(1E,1'E)-biphenyl-4,4'-diylbis(diazene-2,1-diyl)bis(4-aminonaphthalene-1-sulfonate)
Authors:Yan, X, Li, Y.
Deposit date:2021-04-26
Release date:2021-07-14
Last modified:2021-09-01
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Molecular basis for recognition of Gly/N-degrons by CRL2 ZYG11B and CRL2 ZER1 .
Mol.Cell, 81, 2021
7EP3
DownloadVisualize
BU of 7ep3 by Molmil
Crystal structure of ZER1 bound to GAGN degron
Descriptor: Protein zer-1 homolog
Authors:Yan, X, Li, Y.
Deposit date:2021-04-26
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.513 Å)
Cite:Molecular basis for recognition of Gly/N-degrons by CRL2 ZYG11B and CRL2 ZER1 .
Mol.Cell, 81, 2021
7EP5
DownloadVisualize
BU of 7ep5 by Molmil
Crystal structure of ZER1 bound to GKLH degron
Descriptor: Protein zer-1 homolog
Authors:Yan, X, Li, Y.
Deposit date:2021-04-26
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Molecular basis for recognition of Gly/N-degrons by CRL2 ZYG11B and CRL2 ZER1 .
Mol.Cell, 81, 2021
7EP1
DownloadVisualize
BU of 7ep1 by Molmil
Crystal structure of ZYG11B bound to GFLH degron
Descriptor: Protein zyg-11 homolog B
Authors:Yan, X, Li, Y.
Deposit date:2021-04-26
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.852 Å)
Cite:Molecular basis for recognition of Gly/N-degrons by CRL2 ZYG11B and CRL2 ZER1 .
Mol.Cell, 81, 2021
7EP4
DownloadVisualize
BU of 7ep4 by Molmil
Crystal structure of ZER1 bound to GFLH degron
Descriptor: Protein zer-1 homolog
Authors:Yan, X, Li, Y.
Deposit date:2021-04-26
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Molecular basis for recognition of Gly/N-degrons by CRL2 ZYG11B and CRL2 ZER1 .
Mol.Cell, 81, 2021
2PCX
DownloadVisualize
BU of 2pcx by Molmil
Crystal structure of p53DBD(R282Q) at 1.54-angstrom Resolution
Descriptor: Cellular tumor antigen p53, ZINC ION
Authors:Tu, C, Shaw, G, Ji, X.
Deposit date:2007-03-30
Release date:2008-04-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Impact of low-frequency hotspot mutation R282Q on the structure of p53 DNA-binding domain as revealed by crystallography at 1.54 angstroms resolution.
Acta Crystallogr.,Sect.D, 64, 2008
2QIM
DownloadVisualize
BU of 2qim by Molmil
Crystal Structure of Pathogenesis-related Protein LlPR-10.2B from yellow lupine in complex with Cytokinin
Descriptor: (2E)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol, CALCIUM ION, GLYCEROL, ...
Authors:Fernandes, H.C, Pasternak, O, Bujacz, G, Bujacz, A, Sikorski, M.M, Jaskolski, M.
Deposit date:2007-07-05
Release date:2008-04-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Lupinus luteus pathogenesis-related protein as a reservoir for cytokinin.
J.Mol.Biol., 378, 2008
1OXP
DownloadVisualize
BU of 1oxp by Molmil
ASPARTATE AMINOTRANSFERASE, H-ASP COMPLEX, CLOSED CONFORMATION
Descriptor: 4'-DEOXY-4'-ACETYLYAMINO-PYRIDOXAL-5'-PHOSPHATE, ASPARTATE AMINOTRANSFERASE
Authors:Hohenester, E, Schirmer, T, Jansonius, J.N.
Deposit date:1995-12-23
Release date:1996-06-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures and solution studies of oxime adducts of mitochondrial aspartate aminotransferase.
Eur.J.Biochem., 236, 1996
1OXO
DownloadVisualize
BU of 1oxo by Molmil
ASPARTATE AMINOTRANSFERASE, H-ASP COMPLEX, OPEN CONFORMATION
Descriptor: 4'-DEOXY-4'-ACETYLYAMINO-PYRIDOXAL-5'-PHOSPHATE, ASPARTATE AMINOTRANSFERASE
Authors:Hohenester, E, Schirmer, T, Jansonius, J.N.
Deposit date:1995-12-23
Release date:1996-06-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures and solution studies of oxime adducts of mitochondrial aspartate aminotransferase.
Eur.J.Biochem., 236, 1996
3KRJ
DownloadVisualize
BU of 3krj by Molmil
cFMS tyrosine kinase in complex with 4-Cyano-1H-imidazole-2-carboxylic acid (2-cyclohex-1-enyl-4-piperidin-4-yl-phenyl)-amide
Descriptor: 4-cyano-N-(2-cyclohex-1-en-1-yl-4-piperidin-4-ylphenyl)-1H-imidazole-2-carboxamide, ACETATE ION, Macrophage colony-stimulating factor 1 receptor, ...
Authors:Schubert, C.
Deposit date:2009-11-18
Release date:2010-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Optimization of a Potent Class of Arylamide Colony-Stimulating Factor-1 Receptor Inhibitors Leading to Anti-inflammatory Clinical Candidate 4-Cyano-N-[2-(1-cyclohexen-1-yl)-4-[1-[(dimethylamino)acetyl]-4-piperidinyl]phenyl]-1H-imidazole-2-carboxamide (JNJ-28312141).
J.Med.Chem., 54, 2011
3E85
DownloadVisualize
BU of 3e85 by Molmil
Crystal Structure of Pathogenesis-related Protein LlPR-10.2B from yellow lupine in complex with Diphenylurea
Descriptor: 1,3-DIPHENYLUREA, PR10.2B, SODIUM ION
Authors:Fernandes, H.C, Bujacz, G, Bujacz, A, Sikorski, M.M, Jaskolski, M.
Deposit date:2008-08-19
Release date:2009-03-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Cytokinin-induced structural adaptability of a Lupinus luteus PR-10 protein.
Febs J., 276, 2009
6K07
DownloadVisualize
BU of 6k07 by Molmil
Crystal structure of REV7(R124A) in complex with a Shieldin3 fragment
Descriptor: Mitotic spindle assembly checkpoint protein MAD2B, SULFATE ION, Shieldin complex subunit 3
Authors:Zhang, F, Dai, Y.
Deposit date:2019-05-05
Release date:2019-12-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structural basis for shieldin complex subunit 3-mediated recruitment of the checkpoint protein REV7 during DNA double-strand break repair.
J.Biol.Chem., 295, 2020
6K08
DownloadVisualize
BU of 6k08 by Molmil
Crystal structure of REV7(R124A/A135D) in complex with a Shieldin3 fragment
Descriptor: Mitotic spindle assembly checkpoint protein MAD2B, SULFATE ION, Shieldin complex subunit 3
Authors:Zhang, F, Dai, Y.
Deposit date:2019-05-05
Release date:2019-12-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.312 Å)
Cite:Structural basis for shieldin complex subunit 3-mediated recruitment of the checkpoint protein REV7 during DNA double-strand break repair.
J.Biol.Chem., 295, 2020
3KRL
DownloadVisualize
BU of 3krl by Molmil
cFMS Tyrosine kinase in complex with 5-Cyano-furan-2-carboxylic acid [4-(4-methyl-piperazin-1-yl)-2-piperidin-1-yl-phenyl]-amide
Descriptor: 5-cyano-N-[4-(4-methylpiperazin-1-yl)-2-piperidin-1-ylphenyl]furan-2-carboxamide, Macrophage colony-stimulating factor 1 receptor, Basic fibroblast growth factor receptor 1, ...
Authors:Schubert, C.
Deposit date:2009-11-18
Release date:2010-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Optimization of a Potent Class of Arylamide Colony-Stimulating Factor-1 Receptor Inhibitors Leading to Anti-inflammatory Clinical Candidate 4-Cyano-N-[2-(1-cyclohexen-1-yl)-4-[1-[(dimethylamino)acetyl]-4-piperidinyl]phenyl]-1H-imidazole-2-carboxamide (JNJ-28312141).
J.Med.Chem., 54, 2011
8IMX
DownloadVisualize
BU of 8imx by Molmil
Cryo-EM structure of GPI-T with a chimeric GPI-anchored protein
Descriptor: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Xu, Y, Li, T, Qu, Q, Li, D.
Deposit date:2023-03-07
Release date:2023-08-16
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Structures of liganded glycosylphosphatidylinositol transamidase illuminate GPI-AP biogenesis.
Nat Commun, 14, 2023
8IMY
DownloadVisualize
BU of 8imy by Molmil
Cryo-EM structure of GPI-T (inactive mutant) with GPI and proULBP2, a proprotein substrate
Descriptor: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, T, Xu, Y, Qu, Q, Li, D.
Deposit date:2023-03-07
Release date:2023-08-16
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Structures of liganded glycosylphosphatidylinositol transamidase illuminate GPI-AP biogenesis.
Nat Commun, 14, 2023

223166

건을2024-07-31부터공개중

PDB statisticsPDBj update infoContact PDBjnumon