Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7KFY
DownloadVisualize
BU of 7kfy by Molmil
Structural basis for a germline-biased antibody response to SARS-CoV-2 (RBD:C1A-F10 Fab)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, heavy chain of human antibody C1A-F10 Fab, ...
Authors:Pan, J, Abraham, J, Clark, L, Clark, S.
Deposit date:2020-10-15
Release date:2020-12-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.157 Å)
Cite:Molecular basis for a germline-biased neutralizing antibody response to SARS-CoV-2.
Biorxiv, 2020
6BBA
DownloadVisualize
BU of 6bba by Molmil
Crystal structure of human mitochondrial ClpP complex with acyldepsipeptide ADEP-28
Descriptor: ATP-dependent Clp protease proteolytic subunit, mitochondrial, Acyldepsipeptide ADEP-28
Authors:Mabanglo, M.F, Houry, W.A.
Deposit date:2017-10-17
Release date:2018-07-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.796 Å)
Cite:Acyldepsipeptide Analogs Dysregulate Human Mitochondrial ClpP Protease Activity and Cause Apoptotic Cell Death.
Cell Chem Biol, 25, 2018
7KFW
DownloadVisualize
BU of 7kfw by Molmil
Structural basis for a germline-biased antibody response to SARS-CoV-2 (RBD:C1A-B3 Fab)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, heavy chain of antibody C1A-B3 Fab, ...
Authors:Pan, J, Abraham, J, Clark, L, Clark, S.
Deposit date:2020-10-15
Release date:2020-12-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.792 Å)
Cite:Molecular basis for a germline-biased neutralizing antibody response to SARS-CoV-2.
Biorxiv, 2020
5C9I
DownloadVisualize
BU of 5c9i by Molmil
Structure of N-acylhomoserine lactone acylase MacQ shortened spacer mutant (delta202-208) in uncleaved form
Descriptor: GLYCEROL, Protein related to penicillin acylase
Authors:Yasutake, Y, Kusada, H, Kimura, N.
Deposit date:2015-06-27
Release date:2016-06-29
Last modified:2017-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Bifunctional quorum-quenching and antibiotic-acylase MacQ forms a 170-kDa capsule-shaped molecule containing spacer polypeptides
Sci Rep, 7, 2017
4KT1
DownloadVisualize
BU of 4kt1 by Molmil
Complex of R-spondin 1 with LGR4 extracellular domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Leucine-rich repeat-containing G-protein coupled receptor 4, ...
Authors:Wang, X.Q, Wang, D.L.
Deposit date:2013-05-19
Release date:2013-06-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.497 Å)
Cite:Structural basis for R-spondin recognition by LGR4/5/6 receptors
Genes Dev., 27, 2013
2WD4
DownloadVisualize
BU of 2wd4 by Molmil
Ascorbate Peroxidase as a heme oxygenase: w41A variant product with t-butyl peroxide
Descriptor: 3-[2-[[3-(2-CARBOXYETHYL)-5-[[3-ETHENYL-4-METHYL-5-[(2-METHYLPROPAN-2-YL)OXY]-1H-PYRROL-2-YL]METHYL]-4-METHYL-1H-PYRROL -2-YL]METHYL]-5-[(Z)-(4-ETHENYL-3-METHYL-5-OXO-PYRROL-2-YLIDENE)METHYL]-4-METHYL-1H-PYRROL-3-YL]PROPANOIC ACID, ASCORBATE PEROXIDASE, FE (III) ION, ...
Authors:Badyal, S.K, Metcalfe, C.L, Gumiero, A, Raven, E.L, Moody, P.C.E.
Deposit date:2009-03-19
Release date:2009-04-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Evidence for Heme Oxygenase Activity in a Heme Peroxidase.
Biochemistry, 48, 2009
5AVA
DownloadVisualize
BU of 5ava by Molmil
Crystal structure of PHA-E lectin in complex with bisected glycan
Descriptor: CALCIUM ION, Erythroagglutinin, MANGANESE (II) ION, ...
Authors:Nagae, M, Yamaguchi, Y.
Deposit date:2015-06-12
Release date:2016-04-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Atomic visualization of a flipped-back conformation of bisected glycans bound to specific lectins
Sci Rep, 6, 2016
5B1X
DownloadVisualize
BU of 5b1x by Molmil
Crystal structure of human dendritic cell inhibitory receptor (DCIR) C-type lectin domain in complex with biantennary glycan
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose, C-type lectin domain family 4 member A, CALCIUM ION
Authors:Nagae, M, Yamaguchi, Y.
Deposit date:2015-12-21
Release date:2016-05-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.902 Å)
Cite:Crystal structure of human dendritic cell inhibitory receptor C-type lectin domain reveals the binding mode with N-glycan
Febs Lett., 590, 2016
7KFX
DownloadVisualize
BU of 7kfx by Molmil
Structural basis for a germline-biased antibody response to SARS-CoV-2 (RBD:C1A-C2 Fab)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, heavy chain of human antibody C1A-C2 Fab, ...
Authors:Pan, J, Abraham, J, Clark, L, Clark, S.
Deposit date:2020-10-15
Release date:2020-12-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.226 Å)
Cite:Molecular basis for a germline-biased neutralizing antibody response to SARS-CoV-2.
Biorxiv, 2020
5C8F
DownloadVisualize
BU of 5c8f by Molmil
Crystal structure of light-exposed full-length Thermus thermophilus CarH bound to cobalamin
Descriptor: CHLORIDE ION, COBALAMIN, GLYCEROL, ...
Authors:Jost, M, Drennan, C.L.
Deposit date:2015-06-25
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural basis for gene regulation by a B12-dependent photoreceptor.
Nature, 526, 2015
2FGE
DownloadVisualize
BU of 2fge by Molmil
Crystal structure of presequence protease PreP from Arabidopsis thaliana
Descriptor: CHLORIDE ION, MAGNESIUM ION, ZINC ION, ...
Authors:Eneqvist, T, Johnson, K.A.
Deposit date:2005-12-21
Release date:2006-05-16
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The closed structure of presequence protease PreP forms a unique 10 000 A(3) chamber for proteolysis
Embo J., 25, 2006
5C8A
DownloadVisualize
BU of 5c8a by Molmil
Crystal structure of a truncated form of Thermus thermophilus CarH bound to adenosylcobalamin (dark state)
Descriptor: 5'-DEOXYADENOSINE, COBALAMIN, GLYCEROL, ...
Authors:Jost, M, Drennan, C.L.
Deposit date:2015-06-25
Release date:2015-09-30
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for gene regulation by a B12-dependent photoreceptor.
Nature, 526, 2015
5C8E
DownloadVisualize
BU of 5c8e by Molmil
Crystal structure of Thermus thermophilus CarH bound to adenosylcobalamin and a 26-bp DNA segment
Descriptor: 26-mer DNA segment containing the CarH operator sequence (antisense strand), 26-mer DNA segment containing the CarH operator sequence (sense strand), 5'-DEOXYADENOSINE, ...
Authors:Jost, M, Drennan, C.L.
Deposit date:2015-06-25
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.89 Å)
Cite:Structural basis for gene regulation by a B12-dependent photoreceptor.
Nature, 526, 2015
1A19
DownloadVisualize
BU of 1a19 by Molmil
BARSTAR (FREE), C82A MUTANT
Descriptor: BARSTAR
Authors:Ratnaparkhi, G.S, Varadarajan, R.
Deposit date:1997-12-25
Release date:1998-04-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Discrepancies between the NMR and X-ray structures of uncomplexed barstar: analysis suggests that packing densities of protein structures determined by NMR are unreliable.
Biochemistry, 37, 1998
4D0G
DownloadVisualize
BU of 4d0g by Molmil
Structure of Rab14 in complex with Rab-Coupling Protein (RCP)
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RAB11 FAMILY-INTERACTING PROTEIN 1, ...
Authors:Lall, P, Khan, A.R.
Deposit date:2014-04-25
Release date:2015-05-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-Function Analyses of the Interactions between Rab11 and Rab14 Small Gtpases with Their Shared Effector Rab Coupling Protein (Rcp).
J.Biol.Chem., 290, 2015
4FSX
DownloadVisualize
BU of 4fsx by Molmil
crystal structure of Se-substituted Zea mays ZMET2 in complex with SAH
Descriptor: DNA (cytosine-5)-methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Du, J, Patel, D.J.
Deposit date:2012-06-27
Release date:2012-10-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Dual Binding of Chromomethylase Domains to H3K9me2-Containing Nucleosomes Directs DNA Methylation in Plants.
Cell(Cambridge,Mass.), 151, 2012
5A9Y
DownloadVisualize
BU of 5a9y by Molmil
Structure of ppGpp BipA
Descriptor: GTP-BINDING PROTEIN, GUANOSINE-5',3'-TETRAPHOSPHATE
Authors:Kumar, V, Chen, Y, Ero, R, Li, Z, Gao, Y.-G.
Deposit date:2015-07-23
Release date:2015-08-26
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structure of Bipa in GTP Form Bound to the Ratcheted Ribosome.
Proc.Natl.Acad.Sci.USA, 112, 2015
5A9X
DownloadVisualize
BU of 5a9x by Molmil
Structure of GDP bound BipA
Descriptor: GTP-BINDING PROTEIN, GUANOSINE-5'-DIPHOSPHATE
Authors:Kumar, V, Chen, Y, Ero, R, Li, Z, Gao, Y.-G.
Deposit date:2015-07-23
Release date:2015-08-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Structure of Bipa in GTP Form Bound to the Ratcheted Ribosome.
Proc.Natl.Acad.Sci.USA, 112, 2015
5DER
DownloadVisualize
BU of 5der by Molmil
RNA oligonucleotide containing (R)-C5'-ME-2'F U
Descriptor: RNA oligonucleotide containing (R)-C5'-Me-2'-FU
Authors:Harp, J.M, Egli, M.
Deposit date:2015-08-25
Release date:2016-06-29
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis of Duplex Thermodynamic Stability and Enhanced Nuclease Resistance of 5'-C-Methyl Pyrimidine-Modified Oligonucleotides.
J.Org.Chem., 81, 2016
4FT4
DownloadVisualize
BU of 4ft4 by Molmil
crystal structure of Zea mays ZMET2 in complex H3(1-32)K9me2 peptide and SAH
Descriptor: DNA (cytosine-5)-methyltransferase 1, H3(1-32)K9me2 peptide, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Du, J, Patel, D.J.
Deposit date:2012-06-27
Release date:2012-10-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Dual Binding of Chromomethylase Domains to H3K9me2-Containing Nucleosomes Directs DNA Methylation in Plants.
Cell(Cambridge,Mass.), 151, 2012
5D8T
DownloadVisualize
BU of 5d8t by Molmil
RNA octamer containing (S)-5' methyl, 2'-F U.
Descriptor: COBALT HEXAMMINE(III), RNA oligonucleotide containing (S)-C5'-Me-2'-FU
Authors:Harp, J.M, Egli, M.
Deposit date:2015-08-17
Release date:2016-06-29
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural Basis of Duplex Thermodynamic Stability and Enhanced Nuclease Resistance of 5'-C-Methyl Pyrimidine-Modified Oligonucleotides.
J.Org.Chem., 81, 2016
4FT2
DownloadVisualize
BU of 4ft2 by Molmil
crystal structure of Zea mays ZMET2 in complex H3(1-15)K9me2 peptide and SAH
Descriptor: DNA (cytosine-5)-methyltransferase 1, H3 peptide, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Du, J, Patel, D.J.
Deposit date:2012-06-27
Release date:2012-10-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Dual Binding of Chromomethylase Domains to H3K9me2-Containing Nucleosomes Directs DNA Methylation in Plants.
Cell(Cambridge,Mass.), 151, 2012
1IJC
DownloadVisualize
BU of 1ijc by Molmil
Solution Structure of Bucandin, a Neurotoxin from the Venom of the Malayan Krait
Descriptor: bucandin
Authors:Torres, A.M, Kini, R.M, Nirthanan, S, Kuchel, P.W.
Deposit date:2001-04-25
Release date:2001-12-21
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:NMR structure of bucandin, a neurotoxin from the venom of the Malayan krait (Bungarus candidus).
Biochem.J., 360, 2001
2KQT
DownloadVisualize
BU of 2kqt by Molmil
Solid-state NMR structure of the M2 transmembrane peptide of the influenza A virus in DMPC lipid bilayers bound to deuterated amantadine
Descriptor: (3S,5S,7S)-tricyclo[3.3.1.1~3,7~]decan-1-amine, M2 protein
Authors:Cady, S.D, Schmidt-Rohr, K, Wang, J, Soto, C.S, DeGrado, W.F, Hong, M.
Deposit date:2009-11-18
Release date:2010-02-09
Last modified:2024-05-08
Method:SOLID-STATE NMR
Cite:Structure of the amantadine binding site of influenza M2 proton channels in lipid bilayers
Nature, 463, 2010
4OUC
DownloadVisualize
BU of 4ouc by Molmil
Structure of human haspin in complex with histone H3 substrate
Descriptor: (2R,3R,4S,5R)-2-(4-AMINO-5-IODO-7H-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-(HYDROXYMETHYL)TETRAHYDROFURAN-3,4-DIOL, 1,2-ETHANEDIOL, Histone H3.2, ...
Authors:Chaikuad, A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2014-02-15
Release date:2014-04-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Modulation of the chromatin phosphoproteome by the haspin protein kinase.
Mol Cell Proteomics, 13, 2014

222926

건을2024-07-24부터공개중

PDB statisticsPDBj update infoContact PDBjnumon