7CLR
| CryoEM structure of S.typhimurium flagellar LP ring | 分子名称: | Flagellar L-ring protein, Flagellar P-ring protein | 著者 | Yamaguchi, T, Makino, F, Miyata, T, Minamino, T, Kato, T, Namba, K. | 登録日 | 2020-07-21 | 公開日 | 2021-06-02 | 最終更新日 | 2021-12-22 | 実験手法 | ELECTRON MICROSCOPY (3.5 Å) | 主引用文献 | Structure of the molecular bushing of the bacterial flagellar motor. Nat Commun, 12, 2021
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6JY0
| CryoEM structure of S.typhimurium R-type straight flagellar filament made of FljB (A461V) | 分子名称: | Flagellin | 著者 | Yamaguchi, T, Toma, S, Terahara, N, Miyata, T, Minamino, T, Ashikara, M, Namba, K, Kato, T. | 登録日 | 2019-04-25 | 公開日 | 2020-02-19 | 最終更新日 | 2024-03-27 | 実験手法 | ELECTRON MICROSCOPY (3.56 Å) | 主引用文献 | Structural and Functional Comparison ofSalmonellaFlagellar Filaments Composed of FljB and FliC. Biomolecules, 10, 2020
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4YL4
| 1.1 Angstrom resolution X-ray Crystallographic Structure of Psudoazurin | 分子名称: | COPPER (II) ION, GLYCEROL, Pseudoazurin | 著者 | Yamaguchi, T, Asamura, S, Takashina, A, Unno, M, Kohzuma, T. | 登録日 | 2015-03-05 | 公開日 | 2016-03-09 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.1 Å) | 主引用文献 | X-ray crystallographic evidence for the simultaneous presence of axial and rhombic sites in cupredoxins: atomic resolution X-ray crystal structure analysis of pseudoazurin and DFT modelling Rsc Adv, 6, 2016
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5XMO
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5Y23
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8HU5
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8HIS
| Crystal structure of DNA decamer containing GuNA[Me,tBu] | 分子名称: | CACODYLIC ACID, DNA (5'-D(*GP*CP*GP*TP*AP*(LR6)P*AP*CP*GP*C)-3') | 著者 | Aoyama, H, Obika, S, Yamaguchi, T. | 登録日 | 2022-11-21 | 公開日 | 2023-08-09 | 最終更新日 | 2023-09-06 | 実験手法 | X-RAY DIFFRACTION (2.01 Å) | 主引用文献 | Mechanism of the extremely high duplex-forming ability of oligonucleotides modified with N-tert-butylguanidine- or N-tert-butyl-N'- methylguanidine-bridged nucleic acids. Nucleic Acids Res., 51, 2023
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8I50
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5Z0X
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5YW3
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4WDT
| 17beta-HSD5 in complex with 2-nitro-5-(phenylsulfonyl)phenol | 分子名称: | 2-nitro-5-(phenylsulfonyl)phenol, Aldo-keto reductase family 1 member C3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | 著者 | Amano, Y, Yamaguchi, T. | 登録日 | 2014-09-09 | 公開日 | 2015-04-15 | 最終更新日 | 2022-12-14 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | Structures of complexes of type 5 17 beta-hydroxysteroid dehydrogenase with structurally diverse inhibitors: insights into the conformational changes upon inhibitor binding. Acta Crystallogr.,Sect.D, 71, 2015
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4WDU
| 17beta-HSD5 in complex with 4-chloro-N-(4-chlorobenzyl)-5-nitro-1H-pyrazole-3-carboxamide | 分子名称: | 4-chloro-N-(4-chlorobenzyl)-5-nitro-1H-pyrazole-3-carboxamide, Aldo-keto reductase family 1 member C3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | 著者 | Amano, Y, Yamaguchi, T. | 登録日 | 2014-09-09 | 公開日 | 2015-04-15 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Structures of complexes of type 5 17 beta-hydroxysteroid dehydrogenase with structurally diverse inhibitors: insights into the conformational changes upon inhibitor binding. Acta Crystallogr.,Sect.D, 71, 2015
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4WDX
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4WDW
| 17beta-HSD5 in complex with 3,6-dihydropyridin-1(2H)-yl(5-methyl-1H-indol-2-yl)methanone | 分子名称: | 3,6-dihydropyridin-1(2H)-yl(5-methyl-1H-indol-2-yl)methanone, Aldo-keto reductase family 1 member C3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | 著者 | Amano, Y, Yamaguchi, T. | 登録日 | 2014-09-09 | 公開日 | 2015-04-15 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (1.94 Å) | 主引用文献 | Structures of complexes of type 5 17 beta-hydroxysteroid dehydrogenase with structurally diverse inhibitors: insights into the conformational changes upon inhibitor binding. Acta Crystallogr.,Sect.D, 71, 2015
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2NVL
| Crystal structure of archaeal peroxiredoxin, thioredoxin peroxidase from Aeropyrum pernix K1 (sulfonic acid form) | 分子名称: | Probable peroxiredoxin | 著者 | Nakamura, T, Yamamoto, T, Abe, M, Matsumura, H, Hagihara, Y, Goto, T, Yamaguchi, T, Inoue, T. | 登録日 | 2006-11-13 | 公開日 | 2007-11-20 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (2.36 Å) | 主引用文献 | Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate Proc.Natl.Acad.Sci.Usa, 105, 2008
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4Y2Q
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4Y2R
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4Y2X
| Structure of soluble epoxide hydrolase in complex with 2-({[2-(adamantan-1-yl)ethyl]amino}methyl)phenol | 分子名称: | 2-[({2-[(3s,5s,7s)-tricyclo[3.3.1.1~3,7~]dec-1-yl]ethyl}amino)methyl]phenol, Bifunctional epoxide hydrolase 2, MAGNESIUM ION | 著者 | Amano, Y, Yamaguchi, T. | 登録日 | 2015-02-10 | 公開日 | 2015-05-06 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Identification of N-ethylmethylamine as a novel scaffold for inhibitors of soluble epoxide hydrolase by crystallographic fragment screening Bioorg.Med.Chem., 23, 2015
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4Y2Y
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8HM9
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5DKZ
| Crystal structure of glucosidase II alpha subunit (alpha3-Glc2-bound from) | 分子名称: | Alpha glucosidase-like protein, alpha-D-glucopyranose-(1-3)-alpha-D-glucopyranose | 著者 | Satoh, T, Toshimori, T, Yan, G, Yamaguchi, T, Kato, K. | 登録日 | 2015-09-04 | 公開日 | 2016-01-27 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structural basis for two-step glucose trimming by glucosidase II involved in ER glycoprotein quality control. Sci Rep, 6, 2016
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5DKX
| Crystal structure of glucosidase II alpha subunit (Tris-bound from) | 分子名称: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alpha glucosidase-like protein, CHLORIDE ION | 著者 | Satoh, T, Toshimori, T, Yan, G, Yamaguchi, T, Kato, K. | 登録日 | 2015-09-04 | 公開日 | 2016-01-27 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.4 Å) | 主引用文献 | Structural basis for two-step glucose trimming by glucosidase II involved in ER glycoprotein quality control. Sci Rep, 6, 2016
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5DL0
| Crystal structure of glucosidase II alpha subunit (Glc1Man2-bound from) | 分子名称: | Alpha glucosidase-like protein, alpha-D-glucopyranose-(1-3)-alpha-D-mannopyranose | 著者 | Satoh, T, Toshimori, T, Yan, G, Yamaguchi, T, Kato, K. | 登録日 | 2015-09-04 | 公開日 | 2016-01-27 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structural basis for two-step glucose trimming by glucosidase II involved in ER glycoprotein quality control. Sci Rep, 6, 2016
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5DKY
| Crystal structure of glucosidase II alpha subunit (DNJ-bound from) | 分子名称: | 1-DEOXYNOJIRIMYCIN, Alpha glucosidase-like protein | 著者 | Satoh, T, Toshimori, T, Yan, G, Yamaguchi, T, Kato, K. | 登録日 | 2015-09-04 | 公開日 | 2016-01-27 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Structural basis for two-step glucose trimming by glucosidase II involved in ER glycoprotein quality control. Sci Rep, 6, 2016
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1HS7
| VAM3P N-TERMINAL DOMAIN SOLUTION STRUCTURE | 分子名称: | SYNTAXIN VAM3 | 著者 | Dulubova, I, Yamaguchi, T, Wang, Y, Sudhof, T.C, Rizo, J. | 登録日 | 2000-12-24 | 公開日 | 2001-03-07 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | Vam3p structure reveals conserved and divergent properties of syntaxins. Nat.Struct.Biol., 8, 2001
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