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4RCR
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BU of 4rcr by Molmil
STRUCTURE OF THE REACTION CENTER FROM RHODOBACTER SPHAEROIDES R-26 AND 2.4.1: PROTEIN-COFACTOR (BACTERIOCHLOROPHYLL, BACTERIOPHEOPHYTIN, AND CAROTENOID) INTERACTIONS
分子名称: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, FE (III) ION, ...
著者Komiya, H, Yeates, T.O, Chirino, A.J, Rees, D.C, Allen, J.P, Feher, G.
登録日1991-09-09
公開日1993-10-31
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the reaction center from Rhodobacter sphaeroides R-26 and 2.4.1: protein-cofactor (bacteriochlorophyll, bacteriopheophytin, and carotenoid) interactions.
Proc.Natl.Acad.Sci.USA, 85, 1988
3H8Y
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BU of 3h8y by Molmil
Crystal structure of carboxysome small shell protein CsoS1C from Halothiobacillus neapolitanus
分子名称: Major carboxysome shell protein 1C
著者Tsai, Y, Sawaya, M.R, Yeates, T.O.
登録日2009-04-29
公開日2009-09-01
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Analysis of lattice-translocation disorder in the layered hexagonal structure of carboxysome shell protein CsoS1C
Acta Crystallogr.,Sect.D, 65, 2009
2G13
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BU of 2g13 by Molmil
CsoS1A with sulfate ion
分子名称: Major carboxysome shell protein 1A, SULFATE ION
著者Tsai, Y, Sawaya, M.R, Cannon, G.C, Williams, E.B, Kerfeld, C.A, Yeates, T.O.
登録日2006-02-13
公開日2007-02-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Structural Analysis of CsoS1A and the Protein Shell of the Halothiobacillus neapolitanus Carboxysome.
Plos Biol., 5, 2007
5UI2
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BU of 5ui2 by Molmil
CRYSTAL STRUCTURE OF ORANGE CAROTENOID PROTEIN
分子名称: (3'R)-3'-hydroxy-beta,beta-caroten-4-one, CHLORIDE ION, Orange carotenoid-binding protein, ...
著者KERFELD, C.A, SAWAYA, M.R, VISHNU, B, KROGMANN, D, YEATES, T.O.
登録日2017-01-12
公開日2017-01-25
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The crystal structure of a cyanobacterial water-soluble carotenoid binding protein.
Structure, 11, 2003
5D4N
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BU of 5d4n by Molmil
Structure of CPII bound to ADP, AMP and acetate, from Thiomonas intermedia K12
分子名称: ACETATE ION, ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ...
著者Wheatley, N.M, Ngo, J, Cascio, D, Sawaya, M.R, Yeates, T.O.
登録日2015-08-08
公開日2016-09-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A PII-Like Protein Regulated by Bicarbonate: Structural and Biochemical Studies of the Carboxysome-Associated CPII Protein.
J.Mol.Biol., 428, 2016
5D6V
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BU of 5d6v by Molmil
PduJ K25A mutant, from Salmonella enterica serovar Typhimurium LT2, PduJ mutant
分子名称: Carboxysome shell protein
著者Chun, S, Sawaya, M.R, Yeates, T.O.
登録日2015-08-13
公開日2016-06-29
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The function of the PduJ microcompartment shell protein is determined by the genomic position of its encoding gene.
Mol.Microbiol., 101, 2016
2Z9H
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BU of 2z9h by Molmil
Ethanolamine utilization protein, EutN
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, CHLORIDE ION, Ethanolamine utilization protein eutN
著者Tanaka, S, Sawaya, M.R, Yeates, T.O.
登録日2007-09-20
公開日2007-10-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献The crystal structure of ethanolamine utilization protein EutN from E. coli
To be Published
3BN4
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BU of 3bn4 by Molmil
Carboxysome Subunit, CcmK1
分子名称: Carbon dioxide-concentrating mechanism protein ccmK homolog 1, SULFATE ION
著者Tanaka, S, Sawaya, M.R, Yeates, T.O.
登録日2007-12-13
公開日2008-03-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Atomic-level models of the bacterial carboxysome shell.
Science, 319, 2008
8G4E
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BU of 8g4e by Molmil
Green Fluorescence Protein imaged on a cryo-EM imaging scaffold
分子名称: RCG-10 - Cryo-EM imaging scaffold subunit B fused to DARPin, Superfolder Green Fluorescent Protein
著者Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
登録日2023-02-09
公開日2023-08-09
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.98 Å)
主引用文献Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G4F
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BU of 8g4f by Molmil
KRAS G12V complex with GDP imaged on a cryo-EM imaging scaffold
分子名称: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
登録日2023-02-09
公開日2023-08-09
最終更新日2023-09-27
実験手法ELECTRON MICROSCOPY (2.91 Å)
主引用文献Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
4OIK
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BU of 4oik by Molmil
(Quasi-)Racemic X-ray crystal structure of glycosylated chemokine Ser-CCL1.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, C-C motif chemokine 1, CITRIC ACID, ...
著者Okamoto, R, Mandal, K, Sawaya, M.R, Kajihara, Y, Yeates, T.O, Kent, S.B.H.
登録日2014-01-19
公開日2014-05-07
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献(Quasi-)Racemic X-ray Structures of Glycosylated and Non-Glycosylated Forms of the Chemokine Ser-CCL1 Prepared by Total Chemical Synthesis.
Angew.Chem.Int.Ed.Engl., 53, 2014
4OIJ
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BU of 4oij by Molmil
X-ray crystal structure of racemic non-glycosylated chemokine Ser-CCL1
分子名称: C-C motif chemokine 1, D-Ser-CCL1, SULFATE ION
著者Okamoto, R, Mandal, K, Sawaya, M.R, Kajihara, Y, Yeates, T.O, Kent, S.B.H.
登録日2014-01-19
公開日2014-05-07
最終更新日2014-05-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献(Quasi-)Racemic X-ray Structures of Glycosylated and Non-Glycosylated Forms of the Chemokine Ser-CCL1 Prepared by Total Chemical Synthesis.
Angew.Chem.Int.Ed.Engl., 53, 2014
2B5O
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BU of 2b5o by Molmil
ferredoxin-NADP reductase
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase, SULFATE ION
著者Sawaya, M.R, Kerfeld, C.A, Gomez-Lojero, C, Krogmann, D, Bryant, D.A, Yeates, T.O.
登録日2005-09-29
公開日2005-10-11
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.499 Å)
主引用文献Crystal Structure of Ferredoxin-NADP reductase from Synechococcus sp. (PCC 7002)
To be Published
2EWH
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BU of 2ewh by Molmil
Carboxysome protein CsoS1A from Halothiobacillus neapolitanus
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Major carboxysome shell protein 1A
著者Tsai, Y, Sawaya, M.R, Kerfeld, C.A, Yeates, T.O.
登録日2005-11-03
公開日2006-11-14
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural Analysis of CsoS1A and the Protein Shell of the Halothiobacillus neapolitanus Carboxysome.
Plos Biol., 5, 2007
5DRK
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BU of 5drk by Molmil
2.3 Angstrom Structure of CPII, a nitrogen regulatory PII-like protein from Thiomonas intermedia K12, bound to ADP, AMP and bicarbonate.
分子名称: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, BICARBONATE ION, ...
著者Wheatley, N.M, Ngo, J, Cascio, D, Sawaya, M.R, Yeates, T.O.
登録日2015-09-15
公開日2016-10-12
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献A PII-Like Protein Regulated by Bicarbonate: Structural and Biochemical Studies of the Carboxysome-Associated CPII Protein.
J.Mol.Biol., 428, 2016
5DS7
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BU of 5ds7 by Molmil
2.0 A Structure of CPII, a nitrogen regulatory PII-like protein from Thiomonas intermedia K12, bound AMP
分子名称: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, Nitrogen regulatory protein P-II
著者Wheatley, N.M, Ngo, J, Cascio, D, Sawaya, M.R, Yeates, T.O.
登録日2015-09-17
公開日2016-09-28
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A PII-Like Protein Regulated by Bicarbonate: Structural and Biochemical Studies of the Carboxysome-Associated CPII Protein.
J.Mol.Biol., 428, 2016
4YJ2
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BU of 4yj2 by Molmil
Crystal structure of tubulin bound to MI-181
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5,6-dimethyl-2-[(E)-2-(pyridin-3-yl)ethenyl]-1,3-benzothiazole, CALCIUM ION, ...
著者McNamara, D.E, Torres, J.Z, Yeates, T.O.
登録日2015-03-03
公開日2015-05-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of potent anticancer compounds bound to tubulin.
Protein Sci., 24, 2015
4YJ3
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BU of 4yj3 by Molmil
Crystal structure of tubulin bound to compound 2
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-(4-ethoxyphenyl)-3-(2-methoxyphenyl)-7H-[1,2,4]triazolo[3,4-b][1,3,4]thiadiazine, CALCIUM ION, ...
著者McNamara, D.E, Torres, J.Z, Yeates, T.O.
登録日2015-03-03
公開日2015-05-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.75 Å)
主引用文献Structures of potent anticancer compounds bound to tubulin.
Protein Sci., 24, 2015
1KIB
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BU of 1kib by Molmil
cytochrome c6 from Arthrospira maxima: an assembly of 24 subunits in the form of an oblate shell
分子名称: HEME C, cytochrome c6
著者Kerfeld, C.A, Sawaya, M.R, Krogmann, D, Yeates, T.O.
登録日2001-12-03
公開日2002-07-03
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of cytochrome c6 from Arthrospira maxima: an assembly of 24 subunits in a nearly symmetric shell.
Acta Crystallogr.,Sect.D, 58, 2002
3VCD
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BU of 3vcd by Molmil
Computationally Designed Self-assembling Octahedral Cage protein, O333, Crystallized in space group R32
分子名称: CHLORIDE ION, Propanediol utilization polyhedral body protein PduT, SULFATE ION
著者Sawaya, M.R, King, N.P, Sheffler, W, Baker, D, Yeates, T.O.
登録日2012-01-03
公開日2012-06-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Computational design of self-assembling protein nanomaterials with atomic level accuracy.
Science, 336, 2012
3VDX
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BU of 3vdx by Molmil
Structure of a 16 nm protein cage designed by fusing symmetric oligomeric domains
分子名称: Designed 16nm tetrahedral protein cage containing Non-haem bromoperoxidase BPO-A2 and Matrix protein 1
著者Lai, Y.-T, Cascio, D, Yeates, T.O.
登録日2012-01-06
公開日2012-06-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.002 Å)
主引用文献Structure of a 16-nm cage designed by using protein oligomers.
Science, 336, 2012
8G3K
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BU of 8g3k by Molmil
Cryo-EM imaging scaffold subunits A and B used to display KRAS G12C complex with GDP
分子名称: Cob_adeno_trans domain-containing protein, Cryo-EM imaging scaffold subunit B with DARPin - RCG-33
著者Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
登録日2023-02-08
公開日2023-08-09
最終更新日2023-09-27
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G42
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BU of 8g42 by Molmil
KRAS G12C complex with GDP imaged on a cryo-EM imaging scaffold
分子名称: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
登録日2023-02-08
公開日2023-08-09
最終更新日2023-09-27
実験手法ELECTRON MICROSCOPY (3.02 Å)
主引用文献Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
3WIS
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BU of 3wis by Molmil
Crystal structure of Burkholderia xenovorans DmrB in complex with FMN: A Cubic Protein Cage for Redox Transfer
分子名称: FLAVIN MONONUCLEOTIDE, Putative dihydromethanopterin reductase (AfpA), SULFATE ION
著者Bobik, T.A, Cascio, D, Jorda, J, McNamara, D.E, Bustos, C, Wang, T.C, Rasche, M.E, Yeates, T.O.
登録日2013-09-25
公開日2014-02-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献Structure of dihydromethanopterin reductase, a cubic protein cage for redox transfer
J.Biol.Chem., 289, 2014
8G47
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KRAS G12C complex with GDP and AMG 510 imaged on a cryo-EM imaging scaffold
分子名称: AMG 510 (bound form), GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
著者Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
登録日2023-02-08
公開日2023-08-09
最終更新日2023-09-27
実験手法ELECTRON MICROSCOPY (3.19 Å)
主引用文献Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023

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