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7F32
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BU of 7f32 by Molmil
Ny-Hydroxyasparagine: A Multifunctional Unnatural Amino Acid That is a Good P1 Substrate of Asparaginyl Peptide Ligases
分子名称: SYCNCLCRRGVCRCICTI
著者Xia, Y, Liu, C.F.
登録日2021-06-15
公開日2022-09-07
実験手法SOLUTION NMR
主引用文献N gamma-Hydroxyasparagine: A Multifunctional Unnatural Amino Acid That is a Good P1 Substrate of Asparaginyl Peptide Ligases.
Angew.Chem.Int.Ed.Engl., 60, 2021
1LKN
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BU of 1lkn by Molmil
Solution NMR Structure of Protein TM_1112 from Thermotoga maritima. Ontario Centre for Structural Proteomics Target TM1112_1_89; Northeast Structural Genomics Consortium Target VT74.
分子名称: hypothetical protein tm1112
著者Xia, Y, Yee, A, Semesi, A, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG)
登録日2002-04-25
公開日2003-06-24
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution Structure of Hypothetical Protein tm1112
to be published
7F3N
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BU of 7f3n by Molmil
Structure of PopP2 in apo form
分子名称: Type III effector protein popp2
著者Xia, Y, Zhang, Z.M.
登録日2021-06-16
公開日2021-11-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.351856 Å)
主引用文献Secondary-structure switch regulates the substrate binding of a YopJ family acetyltransferase.
Nat Commun, 12, 2021
8D53
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BU of 8d53 by Molmil
Crystal Structure of Mosaic HIV-1 Envelope (MosM3.3) in Complex with antibodies PGT124 and 35O22 at 3.25 Angstrom
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 35O22scFV Heavy chain variable, ...
著者Xian, Y, Wilson, I.A.
登録日2022-06-03
公開日2024-07-24
実験手法X-RAY DIFFRACTION (3.24 Å)
主引用文献Structural and Antigenic Characterization of B Cell Mosaic Env Trimers
To Be Published
8IKX
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BU of 8ikx by Molmil
An Arabidopsis polygalacturonase PGLR
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Pectin lyase-like superfamily protein, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Xiao, Y, Chai, J.
登録日2023-03-01
公開日2024-02-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A plant mechanism of hijacking pathogen virulence factors to trigger innate immunity.
Science, 383, 2024
8IKW
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BU of 8ikw by Molmil
A complex structure of PGIP-PG
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Endo-polygalacturonase, ...
著者Xiao, Y, Chai, J.
登録日2023-03-01
公開日2024-02-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献A plant mechanism of hijacking pathogen virulence factors to trigger innate immunity.
Science, 383, 2024
5KKB
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BU of 5kkb by Molmil
Structure of mouse Golgi alpha-1,2-mannosidase IA and Man9GlcNAc2-PA complex
分子名称: 1,4-BUTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, ...
著者Xiang, Y, Moremen, K.W.
登録日2016-06-21
公開日2016-12-07
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.774 Å)
主引用文献Substrate recognition and catalysis by GH47 alpha-mannosidases involved in Asn-linked glycan maturation in the mammalian secretory pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
7JVB
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BU of 7jvb by Molmil
Crystal structure of the SARS-CoV-2 spike receptor-binding domain (RBD) with nanobody Nb20
分子名称: CACODYLATE ION, Nanobody Nb20, Spike protein S1
著者Xiang, Y, Xiao, Z, Liu, H, Sang, Z, Schneidman-Duhovny, D, Zhang, C, Shi, Y.
登録日2020-08-20
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.287 Å)
主引用文献Versatile and multivalent nanobodies efficiently neutralize SARS-CoV-2.
Science, 370, 2020
1P9G
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BU of 1p9g by Molmil
Crystal structure of a novel antifungal protein distinct with five disulfide bridges from Ecommia ulmoides Oliver at atomic resolution
分子名称: ACETATE ION, EAFP 2
著者Xiang, Y, Huang, R.H, Liu, X.Z, Wang, D.C.
登録日2003-05-12
公開日2004-06-01
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (0.84 Å)
主引用文献Crystal structure of a novel antifungal protein distinct with five disulfide bridges from Eucommia ulmoides Oliver at an atomic resolution.
J.Struct.Biol., 148, 2004
2AMN
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BU of 2amn by Molmil
Solution structure of Fowlicidin-1, a novel Cathelicidin antimicrobial peptide from chicken
分子名称: cathelicidin
著者Xiao, Y, Dai, H, Bommineni, Y.R, Prakash, O, Zhang, G.
登録日2005-08-09
公開日2006-07-18
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Structure-activity relationships of fowlicidin-1, a cathelicidin antimicrobial peptide in chicken.
Febs J., 273, 2006
8D6J
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BU of 8d6j by Molmil
Human Ago2 bound to miR122(21nt) with PIWI loop swapped to AtAgo10 sequence
分子名称: MAGNESIUM ION, Protein argonaute-2, RNA (5'-R(P*UP*GP*GP*AP*GP*UP*GP*UP*GP*AP*CP*AP*AP*UP*GP*GP*UP*GP*UP*UP*U)-3')
著者Xiao, Y, MacRae, I.
登録日2022-06-06
公開日2023-05-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A tiny loop in the Argonaute PIWI domain tunes small RNA seed strength.
Embo Rep., 24, 2023
8D71
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BU of 8d71 by Molmil
Human Ago2 bound to miR122(21nt)
分子名称: MAGNESIUM ION, Protein argonaute-2, miR-122-21nt
著者Xiao, Y, MacRae, I.
登録日2022-06-07
公開日2023-05-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A tiny loop in the Argonaute PIWI domain tunes small RNA seed strength.
Embo Rep., 24, 2023
8D0Y
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BU of 8d0y by Molmil
Crystal Structure of HIV-1 BG505 SOSIPv8 Trimer in Complex with CD4bs targeting antibody 21N13 and interface targeting antibody 35O22 at 4.7 Angstrom
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 35O22scFv Heavy Chain Variable, ...
著者Xian, Y, Wilson, I.A.
登録日2022-05-26
公開日2023-07-19
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (4.7 Å)
主引用文献The domain-swaped dimer of the HIV-1 CD4bs targeting antibody 21N13
To Be Published
8D50
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BU of 8d50 by Molmil
Crystal Structure of Mosaic HIV-1 Envelope (MosM3.1) in Complex with antibodies PGT124 and 35O22 at 4.3 Angstrom
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 35O22 Fab heavy chain, ...
著者Xian, Y, Wilson, I.A.
登録日2022-06-03
公開日2023-12-13
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (4.32 Å)
主引用文献Structural and Antigenic Characterization of B Cell Mosaic Env Trimers
To Be Published
8D4R
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BU of 8d4r by Molmil
Crystal Structure of Mosaic HIV-1 Envelope (MosM3.2) in Complex with antibodies PGT124 and 35O22 at 3.8 Angstrom
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 35O22 Fab heavy chain, ...
著者Xian, Y, Wilson, I.A.
登録日2022-06-02
公開日2023-12-13
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (3.81 Å)
主引用文献The domain-swaped dimer of the HIV-1 CD4bs targeting antibody 21N13
To Be Published
8D01
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BU of 8d01 by Molmil
The domain-swaped dimer of the HIV-1 CD4bs targeting antibody 21N13
分子名称: 21N13 Fab heavy chain, 21N13 Fab light chain
著者Xian, Y, Wilson, I.A.
登録日2022-05-25
公開日2023-12-13
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Structural and Antigenic Characterization of B Cell Mosaic Env Trimers
To Be Published
8H7Q
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BU of 8h7q by Molmil
Cryo-EM structure of Synechocystis sp. PCC6714 Cascade at 3.8 angstrom resolution
分子名称: CRISPR RNA, CRISPR associated protein Cas11b, CRISPR associated protein Cas5, ...
著者Xiao, Y, Lu, M, Yu, C, Zhang, Y.
登録日2022-10-20
公開日2023-10-25
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Cryo-EM structure of Synechocystis sp. PCC6714 Cascade at 3.8 angstrom resolution
To Be Published
6A5A
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BU of 6a5a by Molmil
Crystal structure of plant Receptor-like Kinase ANX1
分子名称: Receptor-like protein kinase ANXUR1
著者Xiao, Y, Chai, J.
登録日2018-06-22
公開日2019-06-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.942 Å)
主引用文献Mechanisms of RALF peptide perception by a heterotypic receptor complex.
Nature, 572, 2019
6A5E
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BU of 6a5e by Molmil
Crystal structure of plant peptide RALF23 in complex with FER and LLG2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GPI-anchored protein LLG2, ...
著者Xiao, Y, Chai, J.
登録日2018-06-23
公開日2019-06-26
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.766 Å)
主引用文献Mechanisms of RALF peptide perception by a heterotypic receptor complex.
Nature, 572, 2019
6A5B
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BU of 6a5b by Molmil
Crystal structure of plant Receptor-like Kinase FER
分子名称: Receptor-like protein kinase FERONIA
著者Xiao, Y, Chai, J.
登録日2018-06-23
公開日2019-06-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.205 Å)
主引用文献Mechanisms of RALF peptide perception by a heterotypic receptor complex.
Nature, 572, 2019
6A5C
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BU of 6a5c by Molmil
Crystal structure of plant Receptor-like Kinase ANX2
分子名称: Receptor-like protein kinase ANXUR2
著者Xiao, Y, Chai, J.
登録日2018-06-23
公開日2019-06-26
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Mechanisms of RALF peptide perception by a heterotypic receptor complex.
Nature, 572, 2019
6A5D
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BU of 6a5d by Molmil
Crystal structure of plant Glycosylphosphatidylinositol-anchored Protein LLG1
分子名称: GPI-anchored protein LLG1, alpha-L-fucopyranose-(1-3)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
著者Xiao, Y, Chai, J.
登録日2018-06-23
公開日2019-06-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.401 Å)
主引用文献Mechanisms of RALF peptide perception by a heterotypic receptor complex.
Nature, 572, 2019
5XVN
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BU of 5xvn by Molmil
E. far Cas1-Cas2/prespacer binary complex
分子名称: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (28-MER), ...
著者Xiao, Y, Ng, S, Nam, K.H, Ke, A.
登録日2017-06-28
公開日2017-10-04
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献How type II CRISPR-Cas establish immunity through Cas1-Cas2-mediated spacer integration.
Nature, 550, 2017
5XVO
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BU of 5xvo by Molmil
E. fae Cas1-Cas2/prespacer/target ternary complex revealing DNA sampling and half-integration states
分子名称: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (28-MER), ...
著者Xiao, Y, Ng, S, Nam, K.H, Ke, A.
登録日2017-06-28
公開日2017-10-04
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献How type II CRISPR-Cas establish immunity through Cas1-Cas2-mediated spacer integration.
Nature, 550, 2017
5XVP
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BU of 5xvp by Molmil
E. fae Cas1-Cas2/prespacer/target ternary complex revealing the fully integrated states
分子名称: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (5'-D(P*TP*TP*CP*TP*CP*CP*GP*AP*G)-3'), ...
著者Xiao, Y, Ng, S, Nam, K.H, Ke, A.
登録日2017-06-28
公開日2017-10-04
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献How type II CRISPR-Cas establish immunity through Cas1-Cas2-mediated spacer integration.
Nature, 550, 2017

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